RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 ZNF223Q9UK11 482 aaPredicted RBP14.85□□□□□ -0.03
COL5A1-208ENST00000618395 LATS1O95835 1130 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 PROSER3Q2NL68 480 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 ANKRD54Q6NXT1 300 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 MRPL41Q8IXM3 137 aaKnown RBP14.85□□□□□ -0.03
COL5A1-208ENST00000618395 BARD1Q99728 777 aaKnown RBP14.85□□□□□ -0.03
COL5A1-208ENST00000618395 TMED9Q9BVK6 235 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 DBNDD1Q9H9R9 158 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 MAGED1Q9Y5V3 778 aaPredicted RBP14.85□□□□□ -0.03
COL5A1-208ENST00000618395 A0A0A0MRY4 1105 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 LOC100130705A0A1B0GUX0 176 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 LIASO43766 372 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 ATXN1P54253 815 aaKnown RBP14.85□□□□□ -0.03
COL5A1-208ENST00000618395 CYP2A13Q16696 494 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 SYT16Q17RD7 645 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 BEST4Q8NFU0 473 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 OR8K5Q8NH50 307 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 SCGB1C1Q8TD33 95 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 GTPBP3Q969Y2 492 aaKnown RBP14.85□□□□□ -0.03
COL5A1-208ENST00000618395 SPATA13Q96N96 652 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 LENG8Q96PV6 779 aaPredicted RBP14.85□□□□□ -0.03
COL5A1-208ENST00000618395 DCP1AQ9NPI6 582 aaPredicted RBP14.85□□□□□ -0.03
COL5A1-208ENST00000618395 FBXL3Q9UKT7 428 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 CNOT6Q9ULM6 557 aaKnown RBP14.85□□□□□ -0.03
COL5A1-208ENST00000618395 SPIN1Q9Y657 262 aaPredicted RBP14.85□□□□□ -0.03
COL5A1-208ENST00000618395 DNAJB5O75953 348 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 INMTO95050 263 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 CCNB2O95067 398 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 ZNF182P17025 639 aaPredicted RBP14.85□□□□□ -0.03
COL5A1-208ENST00000618395 JUNDP17535 347 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 NOS2P35228 1153 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 BTN1A1Q13410 526 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 STXBP5Q5T5C0 1151 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 TIGD3Q6B0B8 471 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 SERPINA13PQ6UXR4 307 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 TMEM126BQ8IUX1 230 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 ZDHHC21Q8IVQ6 265 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 SGCDQ92629 289 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 LYARQ9NX58 379 aaKnown RBP14.85□□□□□ -0.03
COL5A1-208ENST00000618395 RNF6Q9Y252 685 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 TRPM1Q7Z4N2 1603 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 AQP1P29972 269 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 XRRA1Q6P2D8 792 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 C7orf34Q96L11 122 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 GSKIPQ9P0R6 139 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 EVLQ9UI08 416 aaPredicted RBP14.85□□□□□ -0.03
COL5A1-208ENST00000618395 CPTPQ5TA50 214 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 ANKFN1Q8N957 763 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 TMEM161BQ8NDZ6 487 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 ATP6V1C2Q8NEY4 427 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 OR5K1Q8NHB7 308 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 DNAJB3Q8WWF6 145 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 ASB9Q96DX5 294 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 TBX22Q9Y458 520 aa14.85□□□□□ -0.03
COL5A1-208ENST00000618395 OR6C74A6NCV1 312 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 CREBL2O60519 120 aaPredicted RBP14.84□□□□□ -0.03
COL5A1-208ENST00000618395 PPM1AP35813 382 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 ELP2Q6IA86 826 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 ADAMTSL2Q86TH1 951 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 TBC1D16Q8TBP0 767 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 AURKBQ96GD4 344 aaPredicted RBP14.84□□□□□ -0.03
COL5A1-208ENST00000618395 TWNKQ96RR1 684 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 LIN28AQ9H9Z2 209 aaKnown RBP14.84□□□□□ -0.03
COL5A1-208ENST00000618395 TRPS1Q9UHF7 1281 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 CBY3A6NI87 242 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 EFCAB7A8K855 629 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 IFNA1P01562 189 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 IFNW1P05000 195 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 CXCR2P25025 360 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 MAGEA3P43357 314 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 GALNT1Q10472 559 aaPredicted RBP14.84□□□□□ -0.03
COL5A1-208ENST00000618395 RALGPS1Q5JS13 557 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 KLHL6Q8WZ60 621 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 TCF25Q9BQ70 676 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 CISHQ9NSE2 258 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 PPM1HQ9ULR3 514 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 PCDHGB7Q9Y5F8 929 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 NUP214P35658 2090 aaPredicted RBP14.84□□□□□ -0.03
COL5A1-208ENST00000618395 ARID1AO14497 2285 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 CCDC85CA6NKD9 419 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 SCELO95171 688 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 TTPAP49638 278 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 DGKQP52824 942 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 TMEM209Q96SK2 561 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 SLC39A8Q9C0K1 460 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 PRRG1O14668 218 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 NME6O75414 186 aaPredicted RBP14.84□□□□□ -0.03
COL5A1-208ENST00000618395 MANFP55145 182 aaKnown RBP14.84□□□□□ -0.03
COL5A1-208ENST00000618395 RASGEF1BQ0VAM2 473 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 UBE2UQ5VVX9 321 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 KANK2Q63ZY3 851 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 FAM109AQ8N4B1 249 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 NR4A3Q92570 626 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 PMEPA1Q969W9 287 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 NFKBIZQ9BYH8 718 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 FAM83DQ9H4H8 585 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 DNAJB9Q9UBS3 223 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 MINPP1Q9UNW1 487 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 MBP02144 154 aa14.84□□□□□ -0.03
COL5A1-208ENST00000618395 TSPAN8P19075 237 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms