RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 OR2L2Q8NH16 312 aa20.27■□□□□ 0.84
TRAPPC3-208ENST00000616074 APOL2Q9BQE5 337 aa20.27■□□□□ 0.84
TRAPPC3-208ENST00000616074 ASB8Q9H765 288 aa20.27■□□□□ 0.84
TRAPPC3-208ENST00000616074 SLC24A2Q9UI40 661 aa20.27■□□□□ 0.84
TRAPPC3-208ENST00000616074 SGTAO43765 313 aa20.26■□□□□ 0.83
TRAPPC3-208ENST00000616074 DNAJB5O75953 348 aa20.26■□□□□ 0.83
TRAPPC3-208ENST00000616074 ANXA9O76027 345 aa20.26■□□□□ 0.83
TRAPPC3-208ENST00000616074 SRP72O76094 671 aaKnown RBP20.26■□□□□ 0.83
TRAPPC3-208ENST00000616074 PDGFAP04085 211 aa20.26■□□□□ 0.83
TRAPPC3-208ENST00000616074 ARCN1P48444 511 aaKnown RBP20.26■□□□□ 0.83
TRAPPC3-208ENST00000616074 TUBB4BP68371 445 aa20.26■□□□□ 0.83
TRAPPC3-208ENST00000616074 TUBB2AQ13885 445 aa20.26■□□□□ 0.83
TRAPPC3-208ENST00000616074 GPR19Q15760 415 aa20.26■□□□□ 0.83
TRAPPC3-208ENST00000616074 BCL7AQ4VC05 210 aa20.26■□□□□ 0.83
TRAPPC3-208ENST00000616074 C11orf63Q6NUN7 778 aa20.26■□□□□ 0.83
TRAPPC3-208ENST00000616074 ASB18Q6ZVZ8 466 aa20.26■□□□□ 0.83
TRAPPC3-208ENST00000616074 APLFQ8IW19 511 aaPredicted RBP20.26■□□□□ 0.83
TRAPPC3-208ENST00000616074 LILRA3Q8N6C8 439 aaPredicted RBP20.26■□□□□ 0.83
TRAPPC3-208ENST00000616074 TEX19Q8NA77 164 aa20.26■□□□□ 0.83
TRAPPC3-208ENST00000616074 MIB2Q96AX9 1013 aa20.26■□□□□ 0.83
TRAPPC3-208ENST00000616074 RMDN2Q96LZ7 410 aa20.26■□□□□ 0.83
TRAPPC3-208ENST00000616074 PPM1MQ96MI6 270 aa20.26■□□□□ 0.83
TRAPPC3-208ENST00000616074 TUBB2BQ9BVA1 445 aa20.26■□□□□ 0.83
TRAPPC3-208ENST00000616074 TRIM55Q9BYV6 548 aa20.26■□□□□ 0.83
TRAPPC3-208ENST00000616074 TSPY26PQ9H489 355 aa20.26■□□□□ 0.83
TRAPPC3-208ENST00000616074 KIR3DX1Q9H7L2 352 aa20.26■□□□□ 0.83
TRAPPC3-208ENST00000616074 ACSL5Q9ULC5 683 aa20.26■□□□□ 0.83
TRAPPC3-208ENST00000616074 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.26■□□□□ 0.83
TRAPPC3-208ENST00000616074 CLEC18AA5D8T8 446 aa20.25■□□□□ 0.83
TRAPPC3-208ENST00000616074 OR6C74A6NCV1 312 aa20.25■□□□□ 0.83
TRAPPC3-208ENST00000616074 C2orf81A6NN90 581 aa20.25■□□□□ 0.83
TRAPPC3-208ENST00000616074 SCRG1O75711 98 aa20.25■□□□□ 0.83
TRAPPC3-208ENST00000616074 LCA5LO95447 670 aa20.25■□□□□ 0.83
TRAPPC3-208ENST00000616074 SLC35G4P0C7Q5 338 aa20.25■□□□□ 0.83
TRAPPC3-208ENST00000616074 ADRA1AP35348 466 aa20.25■□□□□ 0.83
TRAPPC3-208ENST00000616074 KPNA2P52292 529 aaKnown RBP20.25■□□□□ 0.83
TRAPPC3-208ENST00000616074 XIAPP98170 497 aa20.25■□□□□ 0.83
TRAPPC3-208ENST00000616074 SEMA5AQ13591 1074 aa20.25■□□□□ 0.83
TRAPPC3-208ENST00000616074 ITPRIPL1Q6GPH6 555 aa20.25■□□□□ 0.83
TRAPPC3-208ENST00000616074 FBXO38Q6PIJ6 1188 aa20.25■□□□□ 0.83
TRAPPC3-208ENST00000616074 CLEC18BQ6UXF7 455 aa20.25■□□□□ 0.83
TRAPPC3-208ENST00000616074 RANBP10Q6VN20 620 aa20.25■□□□□ 0.83
TRAPPC3-208ENST00000616074 DAAM2Q86T65 1068 aa20.25■□□□□ 0.83
TRAPPC3-208ENST00000616074 TC2NQ8N9U0 490 aa20.25■□□□□ 0.83
TRAPPC3-208ENST00000616074 CLEC18CQ8NCF0 446 aa20.25■□□□□ 0.83
TRAPPC3-208ENST00000616074 ZFPM2Q8WW38 1151 aa20.25■□□□□ 0.83
TRAPPC3-208ENST00000616074 ZNF501Q96CX3 271 aaPredicted RBP20.25■□□□□ 0.83
TRAPPC3-208ENST00000616074 LINC00615Q96LM1 132 aaPredicted RBP20.25■□□□□ 0.83
TRAPPC3-208ENST00000616074 GPR87Q9BY21 358 aa20.25■□□□□ 0.83
TRAPPC3-208ENST00000616074 KLHL33A6NCF5 533 aa20.24■□□□□ 0.83
TRAPPC3-208ENST00000616074 C5orf60A6NFR6 353 aa20.24■□□□□ 0.83
TRAPPC3-208ENST00000616074 CPNE3O75131 537 aaKnown RBP20.24■□□□□ 0.83
TRAPPC3-208ENST00000616074 ZBTB11O95625 1053 aaPredicted RBP20.24■□□□□ 0.83
TRAPPC3-208ENST00000616074 POLBP06746 335 aa20.24■□□□□ 0.83
TRAPPC3-208ENST00000616074 PSMB4P28070 264 aa20.24■□□□□ 0.83
TRAPPC3-208ENST00000616074 PTPN4P29074 926 aa20.24■□□□□ 0.83
TRAPPC3-208ENST00000616074 MLLT10P55197 1068 aa20.24■□□□□ 0.83
TRAPPC3-208ENST00000616074 IL10RAQ13651 578 aa20.24■□□□□ 0.83
TRAPPC3-208ENST00000616074 LAMB3Q13751 1172 aa20.24■□□□□ 0.83
TRAPPC3-208ENST00000616074 UGT8Q16880 541 aa20.24■□□□□ 0.83
TRAPPC3-208ENST00000616074 CCDC181Q5TID7 509 aa20.24■□□□□ 0.83
TRAPPC3-208ENST00000616074 ARMC6Q6NXE6 501 aa20.24■□□□□ 0.83
TRAPPC3-208ENST00000616074 TMEM126BQ8IUX1 230 aa20.24■□□□□ 0.83
TRAPPC3-208ENST00000616074 OR13C4Q8NGS5 318 aa20.24■□□□□ 0.83
TRAPPC3-208ENST00000616074 ACTL9Q8TC94 416 aa20.24■□□□□ 0.83
TRAPPC3-208ENST00000616074 CRLS1Q9UJA2 301 aa20.24■□□□□ 0.83
TRAPPC3-208ENST00000616074 PCDHA13Q9Y5I0 950 aa20.24■□□□□ 0.83
TRAPPC3-208ENST00000616074 AGAP14A8MT82 685 aa20.23■□□□□ 0.83
TRAPPC3-208ENST00000616074 POLR2CP19387 275 aaPredicted RBP20.23■□□□□ 0.83
TRAPPC3-208ENST00000616074 PRLHRP49683 370 aa20.23■□□□□ 0.83
TRAPPC3-208ENST00000616074 RPS15P62841 145 aaKnown RBP20.23■□□□□ 0.83
TRAPPC3-208ENST00000616074 OTUD4Q01804 1114 aaKnown RBP20.23■□□□□ 0.83
TRAPPC3-208ENST00000616074 GPS2Q13227 327 aa20.23■□□□□ 0.83
TRAPPC3-208ENST00000616074 MSLNQ13421 630 aaPredicted RBP20.23■□□□□ 0.83
TRAPPC3-208ENST00000616074 GSE1Q14687 1217 aa20.23■□□□□ 0.83
TRAPPC3-208ENST00000616074 ANKRD20A2Q5SQ80 823 aa20.23■□□□□ 0.83
TRAPPC3-208ENST00000616074 ANKRD20A1Q5TYW2 823 aa20.23■□□□□ 0.83
TRAPPC3-208ENST00000616074 ANKRD20A3Q5VUR7 823 aa20.23■□□□□ 0.83
TRAPPC3-208ENST00000616074 CPZQ66K79 652 aa20.23■□□□□ 0.83
TRAPPC3-208ENST00000616074 CAPRIN2Q6IMN6 1127 aaKnown RBP20.23■□□□□ 0.83
TRAPPC3-208ENST00000616074 SYVN1Q86TM6 617 aa20.23■□□□□ 0.83
TRAPPC3-208ENST00000616074 CFAP206Q8IYR0 622 aa20.23■□□□□ 0.83
TRAPPC3-208ENST00000616074 SLC38A9Q8NBW4 561 aa20.23■□□□□ 0.83
TRAPPC3-208ENST00000616074 SEC14L1Q92503 715 aa20.23■□□□□ 0.83
TRAPPC3-208ENST00000616074 KCND1Q9NSA2 647 aa20.23■□□□□ 0.83
TRAPPC3-208ENST00000616074 SOHLH2Q9NX45 425 aa20.23■□□□□ 0.83
TRAPPC3-208ENST00000616074 BTRCQ9Y297 605 aa20.23■□□□□ 0.83
TRAPPC3-208ENST00000616074 AAR2Q9Y312 384 aaKnown RBP20.23■□□□□ 0.83
TRAPPC3-208ENST00000616074 COLEC10Q9Y6Z7 277 aa20.23■□□□□ 0.83
TRAPPC3-208ENST00000616074 SPTBP11277 2137 aa20.23■□□□□ 0.83
TRAPPC3-208ENST00000616074 NBPF19A0A087WUL8 3843 aa20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 MACROD2A1Z1Q3 448 aa20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 DDX3YO15523 660 aaKnown RBP20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 PYGMP11217 842 aa20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 CD97P48960 835 aa20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 ZNF140P52738 457 aaPredicted RBP20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 COPS2P61201 443 aa20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 TMPRSS15P98073 1019 aa20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 PDE1BQ01064 536 aa20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 SKOR2Q2VWA4 1001 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms