RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 PPANQ9NQ55 473 aaKnown RBP16.27■□□□□ 0.2
IRF1-211ENST00000613424 FBXO6Q9NRD1 293 aaPredicted RBP16.27■□□□□ 0.2
IRF1-211ENST00000613424 FAM114A2Q9NRY5 505 aa16.27■□□□□ 0.2
IRF1-211ENST00000613424 FBXO5Q9UKT4 447 aa16.27■□□□□ 0.2
IRF1-211ENST00000613424 WASF3Q9UPY6 502 aa16.27■□□□□ 0.2
IRF1-211ENST00000613424 CACNA1AO00555 2505 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 PRAMEF33A0A0G2JMD5 474 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 LIN7AO14910 233 aaPredicted RBP16.26■□□□□ 0.19
IRF1-211ENST00000613424 VIPP01282 170 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 ALDH4A1P30038 563 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 CCR7P32248 378 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 DEKP35659 375 aaKnown RBP16.26■□□□□ 0.19
IRF1-211ENST00000613424 GPR3P46089 330 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 PREPP48147 710 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 CARSP49589 748 aaKnown RBP16.26■□□□□ 0.19
IRF1-211ENST00000613424 RPA4Q13156 261 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 FRG1Q14331 258 aaKnown RBP16.26■□□□□ 0.19
IRF1-211ENST00000613424 BRD3Q15059 726 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 CTSL3PQ5NE16 218 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 TEDDM1Q5T9Z0 273 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 HES3Q5TGS1 186 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 CAPRIN2Q6IMN6 1127 aaKnown RBP16.26■□□□□ 0.19
IRF1-211ENST00000613424 ZNF449Q6P9G9 518 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 TMPRSS7Q7RTY8 843 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 SPRED1Q7Z699 444 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 CCDC25Q86WR0 208 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 TMPRSS12Q86WS5 348 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 ZNF761Q86XN6 746 aaPredicted RBP16.26■□□□□ 0.19
IRF1-211ENST00000613424 TRIM48Q8IWZ4 208 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 PALM2Q8IXS6 379 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 AVL9Q8NBF6 648 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 LRRN4CLQ8ND94 238 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 IFT81Q8WYA0 676 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 SH3KBP1Q96B97 665 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 SLC38A3Q99624 504 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 TSSK1BQ9BXA7 367 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 FOXP3Q9BZS1 431 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 PHACTR1Q9C0D0 580 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 OR52A5Q9H2C5 316 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 LRRN3Q9H3W5 708 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 STN1Q9H668 368 aaKnown RBP16.26■□□□□ 0.19
IRF1-211ENST00000613424 MOCS1Q9NZB8 636 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 VPS9D1Q9Y2B5 631 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 PCDHB1Q9Y5F3 818 aa16.26■□□□□ 0.19
IRF1-211ENST00000613424 CFAP20Q9Y6A4 193 aaKnown RBP16.26■□□□□ 0.19
IRF1-211ENST00000613424 A0A1W2PQM1 296 aa16.25■□□□□ 0.19
IRF1-211ENST00000613424 SLC5A10A0PJK1 596 aa16.25■□□□□ 0.19
IRF1-211ENST00000613424 NTN3O00634 580 aaPredicted RBP16.25■□□□□ 0.19
IRF1-211ENST00000613424 HAUS5O94927 633 aa16.25■□□□□ 0.19
IRF1-211ENST00000613424 MT-CO3P00414 261 aa16.25■□□□□ 0.19
IRF1-211ENST00000613424 ESR1P03372 595 aa16.25■□□□□ 0.19
IRF1-211ENST00000613424 RPLP0P05388 317 aaKnown RBP16.25■□□□□ 0.19
IRF1-211ENST00000613424 SLC35G4P0C7Q5 338 aa16.25■□□□□ 0.19
IRF1-211ENST00000613424 SPINK2P20155 84 aa16.25■□□□□ 0.19
IRF1-211ENST00000613424 LEPRP48357 1165 aaKnown RBP16.25■□□□□ 0.19
IRF1-211ENST00000613424 MPP1Q00013 466 aa16.25■□□□□ 0.19
IRF1-211ENST00000613424 CDCP2Q5VXM1 449 aa16.25■□□□□ 0.19
IRF1-211ENST00000613424 MARCH9Q86YJ5 346 aa16.25■□□□□ 0.19
IRF1-211ENST00000613424 CNTN4Q8IWV2 1026 aa16.25■□□□□ 0.19
IRF1-211ENST00000613424 GALNT15Q8N3T1 639 aa16.25■□□□□ 0.19
IRF1-211ENST00000613424 C2CD4AQ8NCU7 369 aaPredicted RBP16.25■□□□□ 0.19
IRF1-211ENST00000613424 WDR48Q8TAF3 677 aa16.25■□□□□ 0.19
IRF1-211ENST00000613424 GABPB2Q8TAK5 448 aaPredicted RBP16.25■□□□□ 0.19
IRF1-211ENST00000613424 GSDMBQ8TAX9 411 aa16.25■□□□□ 0.19
IRF1-211ENST00000613424 CXorf40BQ96DE9 158 aa16.25■□□□□ 0.19
IRF1-211ENST00000613424 RMDN2Q96LZ7 410 aa16.25■□□□□ 0.19
IRF1-211ENST00000613424 C12orf66Q96MD2 445 aa16.25■□□□□ 0.19
IRF1-211ENST00000613424 PANX3Q96QZ0 392 aa16.25■□□□□ 0.19
IRF1-211ENST00000613424 SLC40A1Q9NP59 571 aa16.25■□□□□ 0.19
IRF1-211ENST00000613424 POT1Q9NUX5 634 aa16.25■□□□□ 0.19
IRF1-211ENST00000613424 PTPRBP23467 1997 aa16.24■□□□□ 0.19
IRF1-211ENST00000613424 H3BMM5 538 aa16.24■□□□□ 0.19
IRF1-211ENST00000613424 ZW10O43264 779 aa16.24■□□□□ 0.19
IRF1-211ENST00000613424 MTHFD1P11586 935 aaKnown RBP16.24■□□□□ 0.19
IRF1-211ENST00000613424 PKMP14618 531 aaKnown RBP16.24■□□□□ 0.19
IRF1-211ENST00000613424 JUPP14923 745 aa16.24■□□□□ 0.19
IRF1-211ENST00000613424 AOAHP28039 575 aa16.24■□□□□ 0.19
IRF1-211ENST00000613424 CD1CP29017 333 aa16.24■□□□□ 0.19
IRF1-211ENST00000613424 SSTR1P30872 391 aa16.24■□□□□ 0.19
IRF1-211ENST00000613424 MAGEA4P43358 317 aa16.24■□□□□ 0.19
IRF1-211ENST00000613424 CD151P48509 253 aa16.24■□□□□ 0.19
IRF1-211ENST00000613424 CSE1LP55060 971 aaKnown RBP16.24■□□□□ 0.19
IRF1-211ENST00000613424 BOP1Q14137 746 aaKnown RBP16.24■□□□□ 0.19
IRF1-211ENST00000613424 AMZ1Q400G9 498 aa16.24■□□□□ 0.19
IRF1-211ENST00000613424 ZNF549Q6P9A3 640 aa16.24■□□□□ 0.19
IRF1-211ENST00000613424 CNSTQ6PJW8 725 aa16.24■□□□□ 0.19
IRF1-211ENST00000613424 CAPN12Q6ZSI9 719 aa16.24■□□□□ 0.19
IRF1-211ENST00000613424 TMEM26Q6ZUK4 368 aa16.24■□□□□ 0.19
IRF1-211ENST00000613424 TMEM159Q96B96 161 aa16.24■□□□□ 0.19
IRF1-211ENST00000613424 C9orf72Q96LT7 481 aa16.24■□□□□ 0.19
IRF1-211ENST00000613424 SCNM1Q9BWG6 230 aa16.24■□□□□ 0.19
IRF1-211ENST00000613424 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.24■□□□□ 0.19
IRF1-211ENST00000613424 FAM129AQ9BZQ8 928 aa16.24■□□□□ 0.19
IRF1-211ENST00000613424 SYNDIG1Q9H7V2 258 aa16.24■□□□□ 0.19
IRF1-211ENST00000613424 UCK1Q9HA47 277 aa16.24■□□□□ 0.19
IRF1-211ENST00000613424 IMP3Q9NV31 184 aaKnown RBP16.24■□□□□ 0.19
IRF1-211ENST00000613424 KCNK4Q9NYG8 393 aa16.24■□□□□ 0.19
IRF1-211ENST00000613424 KLK13Q9UKR3 277 aa16.24■□□□□ 0.19
IRF1-211ENST00000613424 IGHV1OR21-1A0A087WYE8 117 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 FAM149AA5PLN7 773 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms