RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 TRIM54Q9BYV2 358 aa10.88□□□□□ -0.67
CDH4-202ENST00000611855 PRRG3Q9BZD7 231 aa10.88□□□□□ -0.67
CDH4-202ENST00000611855 PAQR5Q9NXK6 330 aaPredicted RBP10.88□□□□□ -0.67
CDH4-202ENST00000611855 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.88□□□□□ -0.67
CDH4-202ENST00000611855 ANGPTL3Q9Y5C1 460 aa10.88□□□□□ -0.67
CDH4-202ENST00000611855 CENPXA8MT69 81 aa10.88□□□□□ -0.67
CDH4-202ENST00000611855 TFECO14948 347 aaPredicted RBP10.88□□□□□ -0.67
CDH4-202ENST00000611855 MITFO75030 526 aaPredicted RBP10.88□□□□□ -0.67
CDH4-202ENST00000611855 PIK3CGP48736 1102 aa10.88□□□□□ -0.67
CDH4-202ENST00000611855 KANK2Q63ZY3 851 aa10.88□□□□□ -0.67
CDH4-202ENST00000611855 TTC23LQ6PF05 361 aa10.88□□□□□ -0.67
CDH4-202ENST00000611855 TRAF7Q6Q0C0 670 aa10.88□□□□□ -0.67
CDH4-202ENST00000611855 PAQR3Q6TCH7 311 aa10.88□□□□□ -0.67
CDH4-202ENST00000611855 SYVN1Q86TM6 617 aa10.88□□□□□ -0.67
CDH4-202ENST00000611855 GALNT12Q8IXK2 581 aa10.88□□□□□ -0.67
CDH4-202ENST00000611855 FBXO39Q8N4B4 442 aa10.88□□□□□ -0.67
CDH4-202ENST00000611855 LEMD2Q8NC56 503 aa10.88□□□□□ -0.67
CDH4-202ENST00000611855 KCTD13Q8WZ19 329 aa10.88□□□□□ -0.67
CDH4-202ENST00000611855 SH3GL1Q99961 368 aa10.88□□□□□ -0.67
CDH4-202ENST00000611855 ZBTB20Q9HC78 741 aaPredicted RBP10.88□□□□□ -0.67
CDH4-202ENST00000611855 C14orf119Q9NWQ9 140 aa10.88□□□□□ -0.67
CDH4-202ENST00000611855 ITM2BQ9Y287 266 aa10.88□□□□□ -0.67
CDH4-202ENST00000611855 A0A0U1RQS6 177 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 LOC100506127A0A0U1RQW1 187 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 NPEPPSL1A6NEC2 478 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 CASTOR2A6NHX0 329 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 GSTA4O15217 222 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 KATNA1O75449 491 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 GABARAPO95166 117 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 GOT2P00505 430 aaKnown RBP10.87□□□□□ -0.67
CDH4-202ENST00000611855 DNTTP04053 509 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 HAPLN1P10915 354 aaPredicted RBP10.87□□□□□ -0.67
CDH4-202ENST00000611855 ZFP36L2P47974 494 aaKnown RBP10.87□□□□□ -0.67
CDH4-202ENST00000611855 TRAF3Q13114 568 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 FAM98BQ52LJ0 330 aaKnown RBP10.87□□□□□ -0.67
CDH4-202ENST00000611855 INTS6LQ5JSJ4 861 aaKnown RBP10.87□□□□□ -0.67
CDH4-202ENST00000611855 TWF2Q6IBS0 349 aaKnown RBP10.87□□□□□ -0.67
CDH4-202ENST00000611855 SULT1C3Q6IMI6 304 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 LYPD8Q6UX82 237 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 LPPQ93052 612 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 CYP2S1Q96SQ9 504 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 CLSTN3Q9BQT9 956 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 SARS2Q9NP81 518 aaKnown RBP10.87□□□□□ -0.67
CDH4-202ENST00000611855 UXTQ9UBK9 157 aaPredicted RBP10.87□□□□□ -0.67
CDH4-202ENST00000611855 GOLGA8CPA6NN73 597 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 OR4F21O95013 312 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 CD36P16671 472 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 POLR2EP19388 210 aaKnown RBP10.87□□□□□ -0.67
CDH4-202ENST00000611855 POLD2P49005 469 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 ST13P50502 369 aaKnown RBP10.87□□□□□ -0.67
CDH4-202ENST00000611855 OR2B6P58173 313 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 TIAL1Q01085 375 aaKnown RBP eCLIP10.87□□□□□ -0.67
CDH4-202ENST00000611855 RCAN2Q14206 197 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 SMN1Q16637 294 aaKnown RBP10.87□□□□□ -0.67
CDH4-202ENST00000611855 C18orf21Q32NC0 220 aaPredicted RBP10.87□□□□□ -0.67
CDH4-202ENST00000611855 ATP6AP1LQ52LC2 224 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 ATAD3CQ5T2N8 411 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 RAP1GAP2Q684P5 730 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 PM20D1Q6GTS8 502 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 LAIR2Q6ISS4 152 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 BHLHA9Q7RTU4 235 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 TMEM179BQ7Z7N9 219 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 ELMOD2Q8IZ81 293 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 TMEM199Q8N511 208 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 BEND7Q8N7W2 519 aaPredicted RBP10.87□□□□□ -0.67
CDH4-202ENST00000611855 ZNF540Q8NDQ6 660 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 PIK3C3Q8NEB9 887 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 DYNC2LI1Q8TCX1 351 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 NCLNQ969V3 563 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 MBOAT4Q96T53 435 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 THUMPD3Q9BV44 507 aaKnown RBP10.87□□□□□ -0.67
CDH4-202ENST00000611855 DCSTAMPQ9H295 470 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 RIBC2Q9H4K1 309 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 FAM124BQ9H5Z6 455 aaPredicted RBP10.87□□□□□ -0.67
CDH4-202ENST00000611855 RASSF1Q9NS23 344 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 ZNF225Q9UK10 706 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 FBXO10Q9UK96 956 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 DERAQ9Y315 318 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 TNS1Q9HBL0 1735 aaKnown RBP10.87□□□□□ -0.67
CDH4-202ENST00000611855 PLXNA1Q9UIW2 1896 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 LOC100130705A0A1B0GUX0 176 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 FAM172BPA6NC97 362 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 EFCAB9A8MZ26 197 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 MEN1O00255 615 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 DFNA5O60443 496 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 APOA1P02647 267 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 SLC2A3P11169 496 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 ZNF37AP17032 561 aaPredicted RBP10.87□□□□□ -0.67
CDH4-202ENST00000611855 DAB2P98082 770 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 SIGIRRQ6IA17 410 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 CIR1Q86X95 450 aaPredicted RBP10.87□□□□□ -0.67
CDH4-202ENST00000611855 METTL4Q8N3J2 472 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 C3orf58Q8NDZ4 430 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 OR10A6Q8NH74 314 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 BPIFB1Q8TDL5 484 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 TSGA13Q96PP4 275 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 C8orf4Q9NR00 106 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 FBXO8Q9NRD0 319 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 PIM2Q9P1W9 311 aa10.87□□□□□ -0.67
CDH4-202ENST00000611855 LEF1Q9UJU2 399 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms