RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 CCR4P51679 360 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 C2orf80Q0P641 193 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 PCLAFQ15004 111 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 RAB30Q15771 203 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 INO80DQ53TQ3 878 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-218ENST00000610726 CCNYL2Q5T2Q4 361 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 GPRC6AQ5T6X5 926 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 INTS11Q5TA45 600 aaKnown RBP7.17□□□□□ -1.26
CSDE1-218ENST00000610726 LPCAT4Q643R3 524 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 ADCK1Q86TW2 530 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 TMEM173Q86WV6 379 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-218ENST00000610726 RMND5BQ96G75 393 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-218ENST00000610726 KXD1Q9BQD3 176 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 MCMBPQ9BTE3 642 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 CSNK1G1Q9HCP0 422 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 SLC22A14Q9Y267 594 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 A0A0G2JN53 185 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 TMEM189-UBE2V1I3L0A0 370 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 ANXA6P08133 673 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 OCM2P0CE71 109 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 OCMP0CE72 109 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-218ENST00000610726 HOXD8P13378 290 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-218ENST00000610726 ATP1B2P14415 290 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-218ENST00000610726 VIPR1P32241 457 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 CD70P32970 193 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 HNF1BP35680 557 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 ACTR1BP42025 376 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 ACTR1AP61163 376 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 SKP1P63208 163 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 KHDC1Q4VXA5 237 aaKnown RBP7.17□□□□□ -1.26
CSDE1-218ENST00000610726 TJAP1Q5JTD0 557 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 SMYD5Q6GMV2 418 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 TIFABQ6ZNK6 161 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 GPR141Q7Z602 305 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 RTN4RL1Q86UN2 441 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-218ENST00000610726 KRT73Q86Y46 540 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 ADHFE1Q8IWW8 467 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 TCEAL8Q8IYN2 117 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 LIX1Q8N485 282 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 ZNF655Q8N720 491 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-218ENST00000610726 LCN9Q8WX39 176 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 HOPXQ9BPY8 73 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-218ENST00000610726 WDR26Q9H7D7 661 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 SUFUQ9UMX1 484 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 COQ6Q9Y2Z9 468 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 AK5Q9Y6K8 562 aa7.17□□□□□ -1.26
CSDE1-218ENST00000610726 OR1F1O43749 312 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 POP7O75817 140 aaKnown RBP7.16□□□□□ -1.26
CSDE1-218ENST00000610726 KRT20P35900 424 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 PLA2G16P53816 162 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 RGS1Q08116 209 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 DSC3Q14574 896 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 NEDD8Q15843 81 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 FAM174BQ3ZCQ3 159 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 HLA-DQA1Q5Y7H0 255 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 GLYATQ6IB77 296 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 MED27Q6P2C8 311 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 R3HCC1LQ7Z5L2 792 aaKnown RBP7.16□□□□□ -1.26
CSDE1-218ENST00000610726 NMD3Q96D46 503 aaKnown RBP7.16□□□□□ -1.26
CSDE1-218ENST00000610726 ZSCAN5AQ9BUG6 496 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 TDRD1Q9BXT4 1180 aaKnown RBP7.16□□□□□ -1.26
CSDE1-218ENST00000610726 TRIT1Q9H3H1 467 aaKnown RBP7.16□□□□□ -1.26
CSDE1-218ENST00000610726 MTG2Q9H4K7 406 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 CXorf56Q9H5V9 222 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 CARS2Q9HA77 564 aaKnown RBP7.16□□□□□ -1.26
CSDE1-218ENST00000610726 RPS6KB2Q9UBS0 482 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 GIMAP2Q9UG22 337 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 PRDM4Q9UKN5 801 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 RAB23Q9ULC3 237 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 USP3Q9Y6I4 520 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 DOCK2Q92608 1830 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 ECM29Q5VYK3 1845 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 SAP18O00422 153 aaKnown RBP7.16□□□□□ -1.26
CSDE1-218ENST00000610726 OR10H2O60403 315 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 NUDT14O95848 222 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 PAK4O96013 591 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-218ENST00000610726 CST1P01037 141 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 PRSS56P0CW18 603 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 NELFEP18615 380 aaKnown RBP7.16□□□□□ -1.26
CSDE1-218ENST00000610726 BNIP2Q12982 314 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 PSAPL1Q6NUJ1 521 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 RANBP10Q6VN20 620 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 PGAM4Q8N0Y7 254 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 PHTF2Q8N3S3 785 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 TXNDC5Q8NBS9 432 aaKnown RBP7.16□□□□□ -1.26
CSDE1-218ENST00000610726 OR9I1Q8NGQ6 314 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 TOX2Q96NM4 488 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 KCNA7Q96RP8 456 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 OSBPL6Q9BZF3 934 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 RNF38Q9H0F5 515 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 RAD21L1Q9H4I0 556 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 AKTIPQ9H8T0 292 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 NLE1Q9NVX2 485 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-218ENST00000610726 ADGRE2Q9UHX3 823 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 PPM1HQ9ULR3 514 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 MAPRE3Q9UPY8 281 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 AP3M1Q9Y2T2 418 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 TMEM98Q9Y2Y6 226 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 BCORQ6W2J9 1755 aa7.16□□□□□ -1.26
CSDE1-218ENST00000610726 PHIPQ8WWQ0 1821 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms