RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	ADCY2	Q08462	1091 aa		20.49	■□□□□ 0.87
NECAB3-222	ENST00000607805	ITGA9	Q13797	1035 aa		20.49	■□□□□ 0.87
NECAB3-222	ENST00000607805	PLEKHS1	Q5SXH7	462 aa		20.49	■□□□□ 0.87
NECAB3-222	ENST00000607805	DUS1L	Q6P1R4	473 aa	Known RBP	20.49	■□□□□ 0.87
NECAB3-222	ENST00000607805	SLC25A41	Q8N5S1	370 aa		20.49	■□□□□ 0.87
NECAB3-222	ENST00000607805	BEND7	Q8N7W2	519 aa	Predicted RBP	20.49	■□□□□ 0.87
NECAB3-222	ENST00000607805	TFB1M	Q8WVM0	346 aa	Known RBP	20.49	■□□□□ 0.87
NECAB3-222	ENST00000607805	PPM1M	Q96MI6	270 aa		20.49	■□□□□ 0.87
NECAB3-222	ENST00000607805	WWP1	Q9H0M0	922 aa		20.49	■□□□□ 0.87
NECAB3-222	ENST00000607805	CHST8	Q9H2A9	424 aa		20.49	■□□□□ 0.87
NECAB3-222	ENST00000607805	KIR3DX1	Q9H7L2	352 aa		20.49	■□□□□ 0.87
NECAB3-222	ENST00000607805	IMP3	Q9NV31	184 aa	Known RBP	20.49	■□□□□ 0.87
NECAB3-222	ENST00000607805	PCDHGB7	Q9Y5F8	929 aa		20.49	■□□□□ 0.87
NECAB3-222	ENST00000607805	ARGFX	A6NJG6	315 aa		20.48	■□□□□ 0.87
NECAB3-222	ENST00000607805	BUD23	O43709	281 aa	Known RBP	20.48	■□□□□ 0.87
NECAB3-222	ENST00000607805	SGTA	O43765	313 aa		20.48	■□□□□ 0.87
NECAB3-222	ENST00000607805	RAB40AL	P0C0E4	278 aa		20.48	■□□□□ 0.87
NECAB3-222	ENST00000607805	RORA	P35398	523 aa		20.48	■□□□□ 0.87
NECAB3-222	ENST00000607805	PTGIR	P43119	386 aa		20.48	■□□□□ 0.87
NECAB3-222	ENST00000607805	CCL11	P51671	97 aa		20.48	■□□□□ 0.87
NECAB3-222	ENST00000607805	PPP2R5E	Q16537	467 aa		20.48	■□□□□ 0.87
NECAB3-222	ENST00000607805	FHL5	Q5TD97	284 aa		20.48	■□□□□ 0.87
NECAB3-222	ENST00000607805	BZW1	Q7L1Q6	419 aa	Known RBP	20.48	■□□□□ 0.87
NECAB3-222	ENST00000607805	GLT6D1	Q7Z4J2	308 aa		20.48	■□□□□ 0.87
NECAB3-222	ENST00000607805	OOSP2	Q86WS3	158 aa		20.48	■□□□□ 0.87
NECAB3-222	ENST00000607805	TMEM126B	Q8IUX1	230 aa		20.48	■□□□□ 0.87
NECAB3-222	ENST00000607805	RHOT1	Q8IXI2	618 aa		20.48	■□□□□ 0.87
NECAB3-222	ENST00000607805	DSEL	Q8IZU8	1212 aa		20.48	■□□□□ 0.87
NECAB3-222	ENST00000607805	ZNF567	Q8N184	647 aa		20.48	■□□□□ 0.87
NECAB3-222	ENST00000607805	EFCAB3	Q8N7B9	438 aa		20.48	■□□□□ 0.87
NECAB3-222	ENST00000607805		Q8NA96	180 aa		20.48	■□□□□ 0.87
NECAB3-222	ENST00000607805	SPDYE1	Q8NFV5	336 aa	Predicted RBP	20.48	■□□□□ 0.87
NECAB3-222	ENST00000607805	OR2L2	Q8NH16	312 aa		20.48	■□□□□ 0.87
NECAB3-222	ENST00000607805	MR1	Q95460	341 aa		20.48	■□□□□ 0.87
NECAB3-222	ENST00000607805	ACSS2	Q9NR19	701 aa		20.48	■□□□□ 0.87
NECAB3-222	ENST00000607805	DDX56	Q9NY93	547 aa	Known RBP	20.48	■□□□□ 0.87
NECAB3-222	ENST00000607805	ACSL5	Q9ULC5	683 aa		20.48	■□□□□ 0.87
NECAB3-222	ENST00000607805	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	20.48	■□□□□ 0.87	3e-7	■□□□□ 8.6
NECAB3-222	ENST00000607805	SEMA7A	O75326	666 aa		20.47	■□□□□ 0.87
NECAB3-222	ENST00000607805	AGFG2	O95081	481 aa		20.47	■□□□□ 0.87
NECAB3-222	ENST00000607805	RNF224	P0DH78	156 aa		20.47	■□□□□ 0.87
NECAB3-222	ENST00000607805	HLA-DPA1	P20036	260 aa		20.47	■□□□□ 0.87
NECAB3-222	ENST00000607805	ARL4D	P49703	201 aa		20.47	■□□□□ 0.87
NECAB3-222	ENST00000607805	GSDMD	P57764	484 aa		20.47	■□□□□ 0.87
NECAB3-222	ENST00000607805	PDE1B	Q01064	536 aa		20.47	■□□□□ 0.87
NECAB3-222	ENST00000607805	ABR	Q12979	859 aa		20.47	■□□□□ 0.87
NECAB3-222	ENST00000607805	XRCC4	Q13426	336 aa		20.47	■□□□□ 0.87
NECAB3-222	ENST00000607805	PTPRCAP	Q14761	206 aa		20.47	■□□□□ 0.87
NECAB3-222	ENST00000607805	TCEAL1	Q15170	157 aa		20.47	■□□□□ 0.87
NECAB3-222	ENST00000607805	ZNF789	Q5FWF6	425 aa		20.47	■□□□□ 0.87
NECAB3-222	ENST00000607805	FNBP1L	Q5T0N5	605 aa		20.47	■□□□□ 0.87
NECAB3-222	ENST00000607805	PRAMEF17	Q5VTA0	474 aa		20.47	■□□□□ 0.87
NECAB3-222	ENST00000607805	FBXO38	Q6PIJ6	1188 aa		20.47	■□□□□ 0.87
NECAB3-222	ENST00000607805	RHOT2	Q8IXI1	618 aa		20.47	■□□□□ 0.87
NECAB3-222	ENST00000607805	OR8K1	Q8NGG5	319 aa		20.47	■□□□□ 0.87
NECAB3-222	ENST00000607805	ZNF398	Q8TD17	642 aa		20.47	■□□□□ 0.87
NECAB3-222	ENST00000607805	BLOC1S5	Q8TDH9	187 aa		20.47	■□□□□ 0.87
NECAB3-222	ENST00000607805	LINC00615	Q96LM1	132 aa	Predicted RBP	20.47	■□□□□ 0.87
NECAB3-222	ENST00000607805	C12orf66	Q96MD2	445 aa		20.47	■□□□□ 0.87
NECAB3-222	ENST00000607805	SYCE3	A1L190	88 aa		20.46	■□□□□ 0.87
NECAB3-222	ENST00000607805	KLHL33	A6NCF5	533 aa		20.46	■□□□□ 0.87
NECAB3-222	ENST00000607805	OR6C74	A6NCV1	312 aa		20.46	■□□□□ 0.87
NECAB3-222	ENST00000607805	AGAP14	A8MT82	685 aa		20.46	■□□□□ 0.87
NECAB3-222	ENST00000607805	MEN1	O00255	615 aa		20.46	■□□□□ 0.87
NECAB3-222	ENST00000607805	CST8	O60676	142 aa		20.46	■□□□□ 0.87
NECAB3-222	ENST00000607805	MSL3P1	P0C860	447 aa		20.46	■□□□□ 0.87
NECAB3-222	ENST00000607805	SLC1A1	P43005	524 aa		20.46	■□□□□ 0.87
NECAB3-222	ENST00000607805	MPP3	Q13368	585 aa		20.46	■□□□□ 0.87
NECAB3-222	ENST00000607805	TFDP2	Q14188	446 aa		20.46	■□□□□ 0.87
NECAB3-222	ENST00000607805	LONRF2	Q1L5Z9	754 aa		20.46	■□□□□ 0.87
NECAB3-222	ENST00000607805	BCL7A	Q4VC05	210 aa		20.46	■□□□□ 0.87
NECAB3-222	ENST00000607805	ENDOV	Q8N8Q3	282 aa	Known RBP	20.46	■□□□□ 0.87
NECAB3-222	ENST00000607805	SSC4D	Q8WTU2	575 aa		20.46	■□□□□ 0.87
NECAB3-222	ENST00000607805	NAT14	Q8WUY8	206 aa		20.46	■□□□□ 0.87
NECAB3-222	ENST00000607805	RMDN2	Q96LZ7	410 aa		20.46	■□□□□ 0.87
NECAB3-222	ENST00000607805	VAT1	Q99536	393 aa		20.46	■□□□□ 0.87
NECAB3-222	ENST00000607805	CHP1	Q99653	195 aa		20.46	■□□□□ 0.87
NECAB3-222	ENST00000607805	GORASP1	Q9BQQ3	440 aa		20.46	■□□□□ 0.87
NECAB3-222	ENST00000607805	NLN	Q9BYT8	704 aa		20.46	■□□□□ 0.87
NECAB3-222	ENST00000607805	POMT2	Q9UKY4	750 aa		20.46	■□□□□ 0.87
NECAB3-222	ENST00000607805	PKP3	Q9Y446	797 aa		20.46	■□□□□ 0.87
NECAB3-222	ENST00000607805	ZNF451	Q9Y4E5	1061 aa		20.46	■□□□□ 0.87
NECAB3-222	ENST00000607805	HYOU1	Q9Y4L1	999 aa		20.46	■□□□□ 0.87
NECAB3-222	ENST00000607805	MSH3	P20585	1137 aa		20.45	■□□□□ 0.86
NECAB3-222	ENST00000607805	PBLD	P30039	288 aa	Predicted RBP	20.45	■□□□□ 0.86
NECAB3-222	ENST00000607805	INPP5J	Q15735	1006 aa	Predicted RBP	20.45	■□□□□ 0.86
NECAB3-222	ENST00000607805	TMTC4	Q5T4D3	741 aa		20.45	■□□□□ 0.86
NECAB3-222	ENST00000607805	JMJD6	Q6NYC1	403 aa	Predicted RBP	20.45	■□□□□ 0.86
NECAB3-222	ENST00000607805	LILRA3	Q8N6C8	439 aa	Predicted RBP	20.45	■□□□□ 0.86
NECAB3-222	ENST00000607805	C1GALT1	Q9NS00	363 aa		20.45	■□□□□ 0.86
NECAB3-222	ENST00000607805	SPTLC3	Q9NUV7	552 aa		20.45	■□□□□ 0.86
NECAB3-222	ENST00000607805	CUEDC1	Q9NWM3	386 aa	Predicted RBP	20.45	■□□□□ 0.86
NECAB3-222	ENST00000607805	TCFL5	Q9UL49	500 aa		20.45	■□□□□ 0.86
NECAB3-222	ENST00000607805	CSMD1	Q96PZ7	3565 aa		20.45	■□□□□ 0.86
NECAB3-222	ENST00000607805	SLC9B1P1	A6NJY1	282 aa		20.44	■□□□□ 0.86
NECAB3-222	ENST00000607805		F5H423	210 aa	Predicted RBP	20.44	■□□□□ 0.86
NECAB3-222	ENST00000607805	AKR1B10	O60218	316 aa		20.44	■□□□□ 0.86
NECAB3-222	ENST00000607805	LCA5L	O95447	670 aa		20.44	■□□□□ 0.86
NECAB3-222	ENST00000607805	PRAMEF1	O95521	474 aa		20.44	■□□□□ 0.86
NECAB3-222	ENST00000607805	KLK3	P07288	261 aa	Predicted RBP	20.44	■□□□□ 0.86

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms