RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 CLIP4Q8N3C7 705 aa15.18■□□□□ 0.02
PNKP-204ENST00000594661 SPATA6LQ8N4H0 392 aa15.18■□□□□ 0.02
PNKP-204ENST00000594661 LSMEM1Q8N8F7 131 aa15.18■□□□□ 0.02
PNKP-204ENST00000594661 TDRD5Q8NAT2 981 aaKnown RBP15.18■□□□□ 0.02
PNKP-204ENST00000594661 RP9Q8TA86 221 aaKnown RBP15.18■□□□□ 0.02
PNKP-204ENST00000594661 AGR3Q8TD06 166 aa15.18■□□□□ 0.02
PNKP-204ENST00000594661 MOCOSQ96EN8 888 aa15.18■□□□□ 0.02
PNKP-204ENST00000594661 SLC46A2Q9BY10 475 aa15.18■□□□□ 0.02
PNKP-204ENST00000594661 TRIT1Q9H3H1 467 aaKnown RBP15.18■□□□□ 0.02
PNKP-204ENST00000594661 RAD21L1Q9H4I0 556 aa15.18■□□□□ 0.02
PNKP-204ENST00000594661 MAGEE1Q9HCI5 957 aa15.18■□□□□ 0.02
PNKP-204ENST00000594661 PCDH12Q9NPG4 1184 aa15.18■□□□□ 0.02
PNKP-204ENST00000594661 ACSS2Q9NR19 701 aa15.18■□□□□ 0.02
PNKP-204ENST00000594661 KLQ9UEF7 1012 aa15.18■□□□□ 0.02
PNKP-204ENST00000594661 ARL5AQ9Y689 179 aa15.18■□□□□ 0.02
PNKP-204ENST00000594661 TYW5A2RUC4 315 aaKnown RBP15.17■□□□□ 0.02
PNKP-204ENST00000594661 LINC01553A4QN01 128 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 SLC22A2O15244 555 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 SEC14L2O76054 403 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 MATN1P21941 496 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 PIK3R1P27986 724 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 DPP6P42658 865 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 GRIA4P48058 902 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 GNG2P59768 71 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 PRAMEP78395 509 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 HSPA14Q0VDF9 509 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 CDH18Q13634 790 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 TUBA3CQ13748 450 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 PTPRCAPQ14761 206 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 ZNF789Q5FWF6 425 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 UGT3A1Q6NUS8 523 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 KIAA0408Q6ZU52 694 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 HTR3DQ70Z44 454 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 SNX32Q86XE0 403 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 STYXQ8WUJ0 223 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 CHAC2Q8WUX2 184 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 S100ZQ8WXG8 99 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 NXNL1Q96CM4 212 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 TCEAL4Q96EI5 215 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 DHRS9Q9BPW9 319 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 COG4Q9H9E3 785 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 CPNE5Q9HCH3 593 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 TLR9Q9NR96 1032 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 XPR1Q9UBH6 696 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 OR51F1A6NGY5 319 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 LEFTY2O00292 366 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 NDST3O95803 873 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 CHRNGP07510 517 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 NAT2P11245 290 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 M6PRP20645 277 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 IFNA8P32881 189 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 IRS1P35568 1242 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 POU4F1Q01851 419 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 OCA2Q04671 838 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 C19orf57Q0VDD7 668 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 SLC14A2Q15849 920 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 CDONQ4KMG0 1287 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 RBM20Q5T481 1227 aaKnown RBP15.17■□□□□ 0.02
PNKP-204ENST00000594661 PTAR1Q7Z6K3 402 aaPredicted RBP15.17■□□□□ 0.02
PNKP-204ENST00000594661 PARP8Q8N3A8 854 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 SNX31Q8N9S9 440 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 GABPB2Q8TAK5 448 aaPredicted RBP15.17■□□□□ 0.02
PNKP-204ENST00000594661 PNPT1Q8TCS8 783 aaKnown RBP15.17■□□□□ 0.02
PNKP-204ENST00000594661 HDAC10Q969S8 669 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 ASB9Q96DX5 294 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 ALG14Q96F25 216 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 CIB1Q99828 191 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 SLC7A5P2Q9GIP4 190 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 OR2B2Q9GZK3 357 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 ILKAPQ9H0C8 392 aaPredicted RBP15.17■□□□□ 0.02
PNKP-204ENST00000594661 C12orf10Q9HB07 376 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 NEK6Q9HC98 313 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 SMOXQ9NWM0 555 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 CLEC4EQ9ULY5 219 aa15.17■□□□□ 0.02
PNKP-204ENST00000594661 SYCE1LA8MT33 242 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 TRIM38O00635 465 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 DLGAP1O14490 977 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 PRLP01236 227 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 GNAO1P09471 354 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 MYOGP15173 224 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 LEPRP48357 1165 aaKnown RBP15.16■□□□□ 0.02
PNKP-204ENST00000594661 PRKAA2P54646 552 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 NAGLUP54802 743 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 PHC1P78364 1004 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 RHDQ02161 417 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 HMBOX1Q6NT76 420 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 ZBTB49Q6ZSB9 765 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 TPGS1Q6ZTW0 290 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 OR6P1Q8NGX9 317 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 PHOSPHO2Q8TCD6 241 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 SLCO4A1Q96BD0 722 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 GPR78Q96P69 363 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 SMIM14Q96QK8 99 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 OMDQ99983 421 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 EFHD1Q9BUP0 239 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 YTHDF1Q9BYJ9 559 aaKnown RBP15.16■□□□□ 0.02
PNKP-204ENST00000594661 MCOLN1Q9GZU1 580 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 WDR41Q9HAD4 459 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 LHX3Q9UBR4 397 aa15.16■□□□□ 0.02
PNKP-204ENST00000594661 CCL26Q9Y258 94 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms