RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 CNOT6Q9ULM6 557 aaKnown RBP9.28□□□□□ -0.92
BRCA1-226ENST00000591534 OAS3Q9Y6K5 1087 aaKnown RBP9.28□□□□□ -0.92
BRCA1-226ENST00000591534 COL12A1Q99715 3063 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 SCN8AQ9UQD0 1980 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 A0A0U1RQS6 177 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 MACROD2A1Z1Q3 448 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 C21orf140B9A014 251 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 VPS4BO75351 444 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 KATNA1O75449 491 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 RFPL1O75677 317 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 EML2O95834 649 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 PRLP01236 227 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 JCHAINP01591 159 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 C9P02748 559 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 ZFXP17010 805 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-226ENST00000591534 OAS2P29728 719 aaKnown RBP9.27□□□□□ -0.93
BRCA1-226ENST00000591534 GJC1P36383 396 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 CD86P42081 329 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 ARL4DP49703 201 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 TERF1P54274 439 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 TAS2R40P59535 323 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 UBE2IP63279 158 aaKnown RBP9.27□□□□□ -0.93
BRCA1-226ENST00000591534 PDE1BQ01064 536 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 RPS6KA1Q15418 735 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 IGFBP7Q16270 282 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 WHAMMP3Q1A5X7 153 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 CCDC181Q5TID7 509 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 NCBP2-AS2Q69YL0 99 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 WASH2PQ6VEQ5 465 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 TIPARPQ7Z3E1 657 aaKnown RBP9.27□□□□□ -0.93
BRCA1-226ENST00000591534 PPP1R3BQ86XI6 285 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 SLC35G2Q8TBE7 412 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 ARRDC2Q8TBH0 407 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 BRSK1Q8TDC3 778 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-226ENST00000591534 HDAC11Q96DB2 347 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 PBKQ96KB5 322 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 TGM7Q96PF1 710 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 FCRL4Q96PJ5 515 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 PLEKHG4BQ96PX9 1271 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 OR6C1Q96RD1 312 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 TIMM29Q9BSF4 260 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 TBC1D10AQ9BXI6 508 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 GPR63Q9BZJ6 419 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 BRD8Q9H0E9 1235 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 ZNF768Q9H5H4 540 aaKnown RBP9.27□□□□□ -0.93
BRCA1-226ENST00000591534 MAGEE1Q9HCI5 957 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 APMAPQ9HDC9 416 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 WASH6PQ9NQA3 447 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 HOMER3Q9NSC5 361 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 SIDT1Q9NXL6 827 aaKnown RBP9.27□□□□□ -0.93
BRCA1-226ENST00000591534 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.27□□□□□ -0.93
BRCA1-226ENST00000591534 ATXN10Q9UBB4 475 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 CROTQ9UKG9 612 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 VPS4AQ9UN37 437 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 TFR2Q9UP52 801 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 SAR1BQ9Y6B6 198 aa9.27□□□□□ -0.93
BRCA1-226ENST00000591534 GOLGA6L10A0A0M3HER8 536 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 TMEM238LA0A1B0GVL6 79 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 PIPSLA2A3N6 862 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 FADS2P1A8MWK0 482 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 PPP1R12AO14974 1030 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-226ENST00000591534 SPOPO43791 374 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 FBXO24O75426 580 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 CDK14O94921 469 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 HLA-DQB2P05538 268 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 FGF5P12034 268 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 ZNF7P17097 686 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-226ENST00000591534 ZNF8P17098 575 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-226ENST00000591534 TYRP1P17643 537 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 MCM3P25205 808 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 CAPZBP47756 277 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 SEPHS1P49903 392 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 ARSEP51690 589 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 NIPAL4Q0D2K0 466 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 ERV3-1Q14264 604 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 PDK1Q15118 436 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 LRRC38Q5VT99 294 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 AGAP9Q5VTM2 703 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 CACHD1Q5VU97 1274 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 ZDHHC20Q5W0Z9 365 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 ABRAXAS1Q6UWZ7 409 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 ASB18Q6ZVZ8 466 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 BZW1Q7L1Q6 419 aaKnown RBP9.26□□□□□ -0.93
BRCA1-226ENST00000591534 PRSS42Q7Z5A4 293 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 NT5DC3Q86UY8 548 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 GALNT6Q8NCL4 622 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 THAP4Q8WY91 577 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 UBXN4Q92575 508 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 GLYATL1Q969I3 302 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 RUNDC3BQ96NL0 473 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 GPR87Q9BY21 358 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 TWSG1Q9GZX9 223 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 RAB33BQ9H082 229 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 LRRC4CQ9HCJ2 640 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 DDX56Q9NY93 547 aaKnown RBP9.26□□□□□ -0.93
BRCA1-226ENST00000591534 NFKBIL1Q9UBC1 381 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-226ENST00000591534 EPHA6Q9UF33 1036 aa9.26□□□□□ -0.93
BRCA1-226ENST00000591534 FEZ2Q9UHY8 353 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-226ENST00000591534 LNPEPQ9UIQ6 1025 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms