RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 ITIH5Q86UX2 942 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 PHYKPLQ8IUZ5 450 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 SLC15A3Q8IY34 581 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 RBFAQ8N0V3 343 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 MYO1HQ8N1T3 1032 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 SIDT2Q8NBJ9 832 aaKnown RBP7.3□□□□□ -1.24
ZNF540-206ENST00000589117 TNIP2Q8NFZ5 429 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 METTL6Q8TCB7 284 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 CD200R1Q8TD46 325 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 NAT14Q8WUY8 206 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 CANT1Q8WVQ1 401 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 NCSTNQ92542 709 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 NKD1Q969G9 470 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 ACDQ96AP0 544 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 CENPNQ96H22 339 aaPredicted RBP7.3□□□□□ -1.24
ZNF540-206ENST00000589117 PRICKLE1Q96MT3 831 aaPredicted RBP7.3□□□□□ -1.24
ZNF540-206ENST00000589117 ZBTB18Q99592 522 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 CIB1Q99828 191 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 KCTD14Q9BQ13 255 aaPredicted RBP7.3□□□□□ -1.24
ZNF540-206ENST00000589117 FEM1AQ9BSK4 669 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 IRF2BPLQ9H1B7 796 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 TUBB1Q9H4B7 451 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 BPIFA1Q9NP55 256 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 GKN1Q9NS71 199 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 PNPLA3Q9NST1 481 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 DZANK1Q9NVP4 752 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 AIG1Q9NVV5 245 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 GALPQ9UBC7 116 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 STOML2Q9UJZ1 356 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 MAFFQ9ULX9 164 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 ZNF510Q9Y2H8 683 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 TIMM22Q9Y584 194 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 ANGPTL3Q9Y5C1 460 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 FRMPD3Q5JV73 1810 aa7.3□□□□□ -1.24
ZNF540-206ENST00000589117 LRRC14BA6NHZ5 514 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 ZNF839A8K0R7 811 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 TBL1XO60907 577 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 NIPSNAP2O75323 286 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 EEDO75530 441 aaKnown RBP7.29□□□□□ -1.24
ZNF540-206ENST00000589117 BAIAP3O94812 1187 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 ABLIM3O94929 683 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 PGM3O95394 542 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 H6PDO95479 791 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 PRR35P0CG20 571 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 MBL2P11226 248 aaPredicted RBP7.29□□□□□ -1.24
ZNF540-206ENST00000589117 HMGA1P17096 107 aaKnown RBP7.29□□□□□ -1.24
ZNF540-206ENST00000589117 ITGALP20701 1170 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 CAPN3P20807 821 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 SLC6A2P23975 617 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 GATMP50440 423 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 FOXA1P55317 472 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 PRMT2P55345 433 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 ESRRGP62508 458 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 SMAD3P84022 425 aaKnown RBP7.29□□□□□ -1.24
ZNF540-206ENST00000589117 BCL2L1Q07817 233 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 PCBP2Q15366 365 aaKnown RBP eCLIP7.29□□□□□ -1.24
ZNF540-206ENST00000589117 SLC5A9Q2M3M2 681 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 TTLL9Q3SXZ7 439 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 C6orf10Q5SRN2 563 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 TMTC4Q5T4D3 741 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 PSAPL1Q6NUJ1 521 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 SATL1Q86VE3 508 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 SPPL2CQ8IUH8 684 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 SLITRK4Q8IW52 837 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 PIANPQ8IYJ0 282 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 TBC1D21Q8IYX1 336 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 TMEM199Q8N511 208 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 TRPV3Q8NET8 790 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 TSPAN14Q8NG11 270 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 SH3RF2Q8TEC5 729 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 POP5Q969H6 163 aaKnown RBP7.29□□□□□ -1.24
ZNF540-206ENST00000589117 TMEM169Q96HH4 297 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 IGSF21Q96ID5 467 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 PPP3R2Q96LZ3 170 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 KCNA7Q96RP8 456 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 SLC39A3Q9BRY0 314 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 ZFYVE1Q9HBF4 777 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 UBAP1Q9NZ09 502 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 IL17CQ9P0M4 197 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 CNOT6Q9ULM6 557 aaKnown RBP7.29□□□□□ -1.24
ZNF540-206ENST00000589117 DMTF1Q9Y222 760 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 AP3M1Q9Y2T2 418 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 MED16Q9Y2X0 877 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 PABPN1LA6NDY0 278 aaKnown RBP7.29□□□□□ -1.24
ZNF540-206ENST00000589117 E2F3O00716 465 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 NME4O00746 187 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 OR1I1O60431 355 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 TIPRLO75663 272 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 PRSS56P0CW18 603 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 ATP6V1B1P15313 513 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 RPS3P23396 243 aaKnown RBP eCLIP7.29□□□□□ -1.24
ZNF540-206ENST00000589117 HMOX2P30519 316 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 CASP2P42575 452 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 PIK3CGP48736 1102 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 DIO3P55073 304 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 TUBA4AP68366 448 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 ARF5P84085 180 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 CREB5Q02930 508 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 EMX2Q04743 252 aa7.29□□□□□ -1.24
ZNF540-206ENST00000589117 CYP51A1Q16850 503 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms