RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 MED16Q9Y2X0 877 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 CNOT1A5YKK6 2376 aaKnown RBP18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 LIN7AO14910 233 aaPredicted RBP18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 CSRP1P21291 193 aaKnown RBP18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 PDHA2P29803 388 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 DAB2P98082 770 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 DNAJC3Q13217 504 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 NR0B2Q15466 257 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 AGAP9Q5VTM2 703 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 IYDQ6PHW0 289 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 ABRAXAS1Q6UWZ7 409 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 WASH2PQ6VEQ5 465 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 TRMT10CQ7L0Y3 403 aaKnown RBP18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 C17orf82Q86X59 251 aaPredicted RBP18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 SPNS2Q8IVW8 549 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 SFRP1Q8N474 314 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 UHMK1Q8TAS1 419 aaKnown RBP18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 CDC6Q99741 560 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 RTKNQ9BST9 563 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 FUT8Q9BYC5 575 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 PARD6BQ9BYG5 372 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 WWP1Q9H0M0 922 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 SLC32A1Q9H598 525 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 ACSS3Q9H6R3 686 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 SARS2Q9NP81 518 aaKnown RBP18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 WASH6PQ9NQA3 447 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 RABGEF1Q9UJ41 708 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 ACSL5Q9ULC5 683 aa18.59■□□□□ 0.57
CLPTM1-209ENST00000588855 SPTBN4Q9H254 2564 aa18.58■□□□□ 0.56
CLPTM1-209ENST00000588855 SLC5A10A0PJK1 596 aa18.58■□□□□ 0.56
CLPTM1-209ENST00000588855 OR52A4PA6NMU1 304 aa18.58■□□□□ 0.56
CLPTM1-209ENST00000588855 E5RI56 91 aa18.58■□□□□ 0.56
CLPTM1-209ENST00000588855 SLC35G4P0C7Q5 338 aa18.58■□□□□ 0.56
CLPTM1-209ENST00000588855 CKMT1AP12532 417 aa18.58■□□□□ 0.56
CLPTM1-209ENST00000588855 CHRM3P20309 590 aa18.58■□□□□ 0.56
CLPTM1-209ENST00000588855 AOAHP28039 575 aa18.58■□□□□ 0.56
CLPTM1-209ENST00000588855 CLCA4Q14CN2 919 aa18.58■□□□□ 0.56
CLPTM1-209ENST00000588855 GUSBP11Q6P575 273 aa18.58■□□□□ 0.56
CLPTM1-209ENST00000588855 ZC3HC1Q86WB0 502 aaKnown RBP18.58■□□□□ 0.56
CLPTM1-209ENST00000588855 ARL14Q8N4G2 192 aa18.58■□□□□ 0.56
CLPTM1-209ENST00000588855 GPATCH11Q8N954 259 aa18.58■□□□□ 0.56
CLPTM1-209ENST00000588855 SPDYE1Q8NFV5 336 aaPredicted RBP18.58■□□□□ 0.56
CLPTM1-209ENST00000588855 MAPK15Q8TD08 544 aa18.58■□□□□ 0.56
CLPTM1-209ENST00000588855 KCNJ9Q92806 393 aa18.58■□□□□ 0.56
CLPTM1-209ENST00000588855 RMDN2Q96LZ7 410 aa18.58■□□□□ 0.56
CLPTM1-209ENST00000588855 SLC30A3Q99726 388 aa18.58■□□□□ 0.56
CLPTM1-209ENST00000588855 MCMBPQ9BTE3 642 aa18.58■□□□□ 0.56
CLPTM1-209ENST00000588855 OR52A5Q9H2C5 316 aa18.58■□□□□ 0.56
CLPTM1-209ENST00000588855 PADI4Q9UM07 663 aa18.58■□□□□ 0.56
CLPTM1-209ENST00000588855 CDYLQ9Y232 598 aa18.58■□□□□ 0.56
CLPTM1-209ENST00000588855 COMMD10Q9Y6G5 202 aa18.58■□□□□ 0.56
CLPTM1-209ENST00000588855 RP1P56715 2156 aa18.57■□□□□ 0.56
CLPTM1-209ENST00000588855 RIPK2O43353 540 aa18.57■□□□□ 0.56
CLPTM1-209ENST00000588855 SLC2A4P14672 509 aa18.57■□□□□ 0.56
CLPTM1-209ENST00000588855 CKMT2P17540 419 aa18.57■□□□□ 0.56
CLPTM1-209ENST00000588855 SDHBP21912 280 aa18.57■□□□□ 0.56
CLPTM1-209ENST00000588855 HALP42357 657 aa18.57■□□□□ 0.56
CLPTM1-209ENST00000588855 RPIAP49247 311 aa18.57■□□□□ 0.56
CLPTM1-209ENST00000588855 CLCN7P51798 805 aa18.57■□□□□ 0.56
CLPTM1-209ENST00000588855 HSPA14Q0VDF9 509 aa18.57■□□□□ 0.56
CLPTM1-209ENST00000588855 RPA4Q13156 261 aa18.57■□□□□ 0.56
CLPTM1-209ENST00000588855 TRIP6Q15654 476 aaKnown RBP18.57■□□□□ 0.56
CLPTM1-209ENST00000588855 OTOAQ7RTW8 1153 aa18.57■□□□□ 0.56
CLPTM1-209ENST00000588855 VRK3Q8IV63 474 aa18.57■□□□□ 0.56
CLPTM1-209ENST00000588855 GIMAP7Q8NHV1 300 aa18.57■□□□□ 0.56
CLPTM1-209ENST00000588855 TMEM159Q96B96 161 aa18.57■□□□□ 0.56
CLPTM1-209ENST00000588855 CYTH2Q99418 400 aa18.57■□□□□ 0.56
CLPTM1-209ENST00000588855 GPR21Q99679 349 aa18.57■□□□□ 0.56
CLPTM1-209ENST00000588855 CPNE1Q99829 537 aa18.57■□□□□ 0.56
CLPTM1-209ENST00000588855 EPB41L4BQ9H329 900 aa18.57■□□□□ 0.56
CLPTM1-209ENST00000588855 DLL3Q9NYJ7 618 aa18.57■□□□□ 0.56
CLPTM1-209ENST00000588855 NCKIPSDQ9NZQ3 722 aa18.57■□□□□ 0.56
CLPTM1-209ENST00000588855 ZNF624Q9P2J8 865 aaPredicted RBP18.57■□□□□ 0.56
CLPTM1-209ENST00000588855 TXNDC16Q9P2K2 825 aa18.57■□□□□ 0.56
CLPTM1-209ENST00000588855 CORO1CQ9ULV4 474 aaPredicted RBP18.57■□□□□ 0.56
CLPTM1-209ENST00000588855 CFAP20Q9Y6A4 193 aaKnown RBP18.57■□□□□ 0.56
CLPTM1-209ENST00000588855 ASXL3Q9C0F0 2248 aa18.56■□□□□ 0.56
CLPTM1-209ENST00000588855 A0A087WUV0 522 aaPredicted RBP18.56■□□□□ 0.56
CLPTM1-209ENST00000588855 KIR2DS5A0A0G2JLQ3 304 aa18.56■□□□□ 0.56
CLPTM1-209ENST00000588855 A0A0G2JNG1 304 aa18.56■□□□□ 0.56
CLPTM1-209ENST00000588855 OR5K4A6NMS3 321 aa18.56■□□□□ 0.56
CLPTM1-209ENST00000588855 KIR2DS3K7RE56 304 aa18.56■□□□□ 0.56
CLPTM1-209ENST00000588855 GIPC1O14908 333 aa18.56■□□□□ 0.56
CLPTM1-209ENST00000588855 TNFSF14O43557 240 aa18.56■□□□□ 0.56
CLPTM1-209ENST00000588855 GPC4O75487 556 aa18.56■□□□□ 0.56
CLPTM1-209ENST00000588855 FAM155BO75949 473 aa18.56■□□□□ 0.56
CLPTM1-209ENST00000588855 APOA4P06727 396 aa18.56■□□□□ 0.56
CLPTM1-209ENST00000588855 GP5P40197 560 aa18.56■□□□□ 0.56
CLPTM1-209ENST00000588855 NOVA1P51513 510 aaKnown RBP18.56■□□□□ 0.56
CLPTM1-209ENST00000588855 CDKN2DP55273 166 aa18.56■□□□□ 0.56
CLPTM1-209ENST00000588855 TIAL1Q01085 375 aaKnown RBP eCLIP18.56■□□□□ 0.56
CLPTM1-209ENST00000588855 NAB1Q13506 487 aa18.56■□□□□ 0.56
CLPTM1-209ENST00000588855 KIR2DS5Q14953 304 aa18.56■□□□□ 0.56
CLPTM1-209ENST00000588855 TMED2Q15363 201 aa18.56■□□□□ 0.56
CLPTM1-209ENST00000588855 CAPRIN2Q6IMN6 1127 aaKnown RBP18.56■□□□□ 0.56
CLPTM1-209ENST00000588855 DUS1LQ6P1R4 473 aaKnown RBP18.56■□□□□ 0.56
CLPTM1-209ENST00000588855 SIDT2Q8NBJ9 832 aaKnown RBP18.56■□□□□ 0.56
CLPTM1-209ENST00000588855 ACVR1CQ8NER5 493 aa18.56■□□□□ 0.56
CLPTM1-209ENST00000588855 AENQ8WTP8 325 aaKnown RBP18.56■□□□□ 0.56
CLPTM1-209ENST00000588855 ASZ1Q8WWH4 475 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms