RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 SPENQ96T58 3664 aaKnown RBP13.37□□□□□ -0.27
HDAC5-208ENST00000588419 SNRNP200O75643 2136 aaKnown RBP13.37□□□□□ -0.27
HDAC5-208ENST00000588419 GSAPA4D1B5 854 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 BLACEA4D250 179 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 TTLL8A6PVC2 850 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 POLR2CP19387 275 aaPredicted RBP13.37□□□□□ -0.27
HDAC5-208ENST00000588419 CDH3P22223 829 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 CTNNA2P26232 953 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 RBL1P28749 1068 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 PTPN4P29074 926 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 UQCRFS1P47985 274 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 KPNA2P52292 529 aaKnown RBP13.37□□□□□ -0.27
HDAC5-208ENST00000588419 GEMP55040 296 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 PRKAA1Q13131 559 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 SEMA5AQ13591 1074 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 TMTC4Q5T4D3 741 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 PRAMEF17Q5VTA0 474 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 KMT5CQ86Y97 462 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 CNGA4Q8IV77 575 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 FAM26EQ8N5C1 309 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 LILRA3Q8N6C8 439 aaPredicted RBP13.37□□□□□ -0.27
HDAC5-208ENST00000588419 EFCAB3Q8N7B9 438 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 CLIP3Q96DZ5 547 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 RBM41Q96IZ5 413 aaKnown RBP13.37□□□□□ -0.27
HDAC5-208ENST00000588419 RMDN2Q96LZ7 410 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 CD180Q99467 661 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 VAT1Q99536 393 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 FAM118BQ9BPY3 351 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 SLC7A5P2Q9GIP4 190 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 GBA3Q9H227 469 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 FAM96AQ9H5X1 160 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 FANCEQ9HB96 536 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 MAP10Q9P2G4 905 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 PCDHGA6Q9Y5G7 932 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 ALG6Q9Y672 507 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 COL12A1Q99715 3063 aa13.37□□□□□ -0.27
HDAC5-208ENST00000588419 FER1L5A0AVI2 2057 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 MGAT4DA6NG13 374 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 C2orf81A6NN90 581 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 HACD1B0YJ81 288 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 AKR1B15C9JRZ8 316 aaPredicted RBP13.36□□□□□ -0.27
HDAC5-208ENST00000588419 CCL22O00626 93 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 VPS4BO75351 444 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 SRP72O76094 671 aaKnown RBP13.36□□□□□ -0.27
HDAC5-208ENST00000588419 ZRANB2O95218 330 aaKnown RBP eCLIP13.36□□□□□ -0.27
HDAC5-208ENST00000588419 ZBTB11O95625 1053 aaPredicted RBP13.36□□□□□ -0.27
HDAC5-208ENST00000588419 EPOP01588 193 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 LPOP22079 712 aaPredicted RBP13.36□□□□□ -0.27
HDAC5-208ENST00000588419 PSMB4P28070 264 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 MAGEA1P43355 309 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 CCL11P51671 97 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 PGDP52209 483 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 TUBB4BP68371 445 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 GPS2Q13227 327 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 TUBB2AQ13885 445 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 TAZQ16635 292 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 UGT8Q16880 541 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 FAM69BQ5VUD6 431 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 METRNLQ641Q3 311 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 ITPRIPL1Q6GPH6 555 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 SYVN1Q86TM6 617 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 CFAP206Q8IYR0 622 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 KATNAL2Q8IYT4 538 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 D2HGDHQ8N465 521 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 OR4E2Q8NGC2 313 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 OR13C4Q8NGS5 318 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 OR2L2Q8NH16 312 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 KRT35Q92764 455 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 SLC25A23Q9BV35 468 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 TUBB2BQ9BVA1 445 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 KLHL25Q9H0H3 589 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 KIR3DX1Q9H7L2 352 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 SMOXQ9NWM0 555 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 LUZP4Q9P127 313 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 SLC24A2Q9UI40 661 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 TRHDEQ9UKU6 1024 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 INTUQ9ULD6 942 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 VPS4AQ9UN37 437 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 SNX7Q9UNH6 387 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.36□□□□□ -0.27
HDAC5-208ENST00000588419 DNMT3AQ9Y6K1 912 aaPredicted RBP13.36□□□□□ -0.27
HDAC5-208ENST00000588419 RELNP78509 3460 aa13.36□□□□□ -0.27
HDAC5-208ENST00000588419 SHANK1Q9Y566 2161 aa13.35□□□□□ -0.27
HDAC5-208ENST00000588419 SLC9B1P1A6NJY1 282 aa13.35□□□□□ -0.27
HDAC5-208ENST00000588419 TMEM150CB9EJG8 249 aa13.35□□□□□ -0.27
HDAC5-208ENST00000588419 ANXA9O76027 345 aa13.35□□□□□ -0.27
HDAC5-208ENST00000588419 LCA5LO95447 670 aa13.35□□□□□ -0.27
HDAC5-208ENST00000588419 KLK3P07288 261 aaPredicted RBP13.35□□□□□ -0.27
HDAC5-208ENST00000588419 RALBP11234 206 aa13.35□□□□□ -0.27
HDAC5-208ENST00000588419 PTGIRP43119 386 aa13.35□□□□□ -0.27
HDAC5-208ENST00000588419 PRPSAP1Q14558 356 aa13.35□□□□□ -0.27
HDAC5-208ENST00000588419 TAF1AQ15573 450 aaPredicted RBP13.35□□□□□ -0.27
HDAC5-208ENST00000588419 NADK2Q4G0N4 442 aa13.35□□□□□ -0.27
HDAC5-208ENST00000588419 MICALCLQ6ZW33 695 aa13.35□□□□□ -0.27
HDAC5-208ENST00000588419 RCOR2Q8IZ40 523 aa13.35□□□□□ -0.27
HDAC5-208ENST00000588419 ENDOVQ8N8Q3 282 aaKnown RBP13.35□□□□□ -0.27
HDAC5-208ENST00000588419 SEC14L1Q92503 715 aa13.35□□□□□ -0.27
HDAC5-208ENST00000588419 ZNF501Q96CX3 271 aaPredicted RBP13.35□□□□□ -0.27
HDAC5-208ENST00000588419 FERD3LQ96RJ6 166 aa13.35□□□□□ -0.27
HDAC5-208ENST00000588419 FERMT1Q9BQL6 677 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms