RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 PARP15Q460N3 678 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 C6orf10Q5SRN2 563 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 ZNF678Q5SXM1 525 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 IL31Q6EBC2 164 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 BORAQ6PGQ7 559 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 CYHR1Q6ZMK1 362 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 LARP4Q71RC2 724 aaKnown RBP eCLIP14.43□□□□□ -0.1
CCDC43-203ENST00000588210 ALDH16A1Q8IZ83 802 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 LPGAT1Q92604 370 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 NELL1Q92832 810 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 NMD3Q96D46 503 aaKnown RBP14.43□□□□□ -0.1
CCDC43-203ENST00000588210 RPL10LQ96L21 214 aaKnown RBP14.43□□□□□ -0.1
CCDC43-203ENST00000588210 HHIPQ96QV1 700 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 PRPF18Q99633 342 aaKnown RBP14.43□□□□□ -0.1
CCDC43-203ENST00000588210 SPON2Q9BUD6 331 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 GRIP2Q9C0E4 1043 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 NT5MQ9NPB1 228 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 EBF1Q9UH73 591 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 VPS51Q9UID3 782 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 CROTQ9UKG9 612 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 DMTF1Q9Y222 760 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 WDFY4Q6ZS81 3184 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 MUC22E2RYF6 1773 aaPredicted RBP14.43□□□□□ -0.1
CCDC43-203ENST00000588210 CCDC163A0A0D9SF12 145 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 SYNCRIPO60506 623 aaKnown RBP14.43□□□□□ -0.1
CCDC43-203ENST00000588210 S1PR4O95977 384 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 CD86P42081 329 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 RALGDSQ12967 914 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 RETSATQ6NUM9 610 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 TMEM207Q6UWW9 146 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 B3GNT6Q6ZMB0 384 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 RPS27LQ71UM5 84 aaKnown RBP14.43□□□□□ -0.1
CCDC43-203ENST00000588210 SLCO4A1Q96BD0 722 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 ROPN1LQ96C74 230 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 PHF21BQ96EK2 531 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 OSBPL11Q9BXB4 747 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 SLCO3A1Q9UIG8 710 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 HS3ST2Q9Y278 367 aa14.43□□□□□ -0.1
CCDC43-203ENST00000588210 CHD5Q8TDI0 1954 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 BBIP1A8MTZ0 92 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 H0Y858 1186 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 PDLIM1O00151 329 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 CBX4O00257 560 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 SNAP91O60641 907 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 COL9A1P20849 921 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 NR1H2P55055 460 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 CDKN2DP55273 166 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.42□□□□□ -0.1
CCDC43-203ENST00000588210 UNC50Q53HI1 259 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 MARC1Q5VT66 337 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 ISCA2Q86U28 154 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 SPNS2Q8IVW8 549 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 TEX26Q8N6G2 289 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 LRTOMTQ8WZ04 291 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 TADA1Q96BN2 335 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 C19orf60Q96EN9 201 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 HMCESQ96FZ2 354 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 ALG9Q9H6U8 611 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 COQ10BQ9H8M1 238 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 CNOT6Q9ULM6 557 aaKnown RBP14.42□□□□□ -0.1
CCDC43-203ENST00000588210 TCRBV21S2A2A0A5A6 115 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 C7orf72A4D263 438 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 HLA-EP13747 358 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 ATP6V1B1P15313 513 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 FDXRP22570 491 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 ACVRL1P37023 503 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 STK19P49842 368 aaPredicted RBP14.42□□□□□ -0.1
CCDC43-203ENST00000588210 STX1BP61266 288 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 HERVK_113P63132 956 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 DSC2Q02487 901 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 ACVR1Q04771 509 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 SLC10A7Q0GE19 358 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 CAMK2GQ13555 558 aaPredicted RBP14.42□□□□□ -0.1
CCDC43-203ENST00000588210 MYLK3Q32MK0 819 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 HNRNPA1L2Q32P51 320 aaKnown RBP14.42□□□□□ -0.1
CCDC43-203ENST00000588210 KIAA1211LQ6NV74 962 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 IYDQ6PHW0 289 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 PTAR1Q7Z6K3 402 aaPredicted RBP14.42□□□□□ -0.1
CCDC43-203ENST00000588210 CARM1Q86X55 608 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 MPP4Q96JB8 637 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 EFHD1Q9BUP0 239 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 ERVK-6Q9BXR3 956 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 SP110Q9HB58 689 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 ZSCAN32Q9NX65 697 aa14.42□□□□□ -0.1
CCDC43-203ENST00000588210 ARIH1Q9Y4X5 557 aaPredicted RBP14.42□□□□□ -0.1
CCDC43-203ENST00000588210 KLHL33A6NCF5 533 aa14.41□□□□□ -0.1
CCDC43-203ENST00000588210 J3KR12 359 aa14.41□□□□□ -0.1
CCDC43-203ENST00000588210 KDELR3O43731 214 aa14.41□□□□□ -0.1
CCDC43-203ENST00000588210 SUPT7LO94864 414 aa14.41□□□□□ -0.1
CCDC43-203ENST00000588210 ATXN1LP0C7T5 689 aaKnown RBP14.41□□□□□ -0.1
CCDC43-203ENST00000588210 GPX3P22352 226 aa14.41□□□□□ -0.1
CCDC43-203ENST00000588210 ARSDP51689 593 aa14.41□□□□□ -0.1
CCDC43-203ENST00000588210 RPS6KA3P51812 740 aa14.41□□□□□ -0.1
CCDC43-203ENST00000588210 MAXP61244 160 aa14.41□□□□□ -0.1
CCDC43-203ENST00000588210 PRAMEP78395 509 aa14.41□□□□□ -0.1
CCDC43-203ENST00000588210 ARF5P84085 180 aa14.41□□□□□ -0.1
CCDC43-203ENST00000588210 ITKQ08881 620 aa14.41□□□□□ -0.1
CCDC43-203ENST00000588210 IHHQ14623 411 aa14.41□□□□□ -0.1
CCDC43-203ENST00000588210 UGT3A2Q3SY77 523 aa14.41□□□□□ -0.1
CCDC43-203ENST00000588210 SIRPB2Q5JXA9 342 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms