RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 ANHXE9PGG2 379 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 H7C0S8 307 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 PSMD12O00232 456 aaPredicted RBP5.68□□□□□ -1.5
SDF2-206ENST00000587788 TRIM38O00635 465 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 SDHDO14521 159 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 NEMP1O14524 444 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 AIM2O14862 343 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 WIPF1O43516 503 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 ADAM11O75078 769 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 VPS26AO75436 327 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 STAMBPO95630 424 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 BAG2O95816 211 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 MLYCDO95822 493 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 GOT2P00505 430 aaKnown RBP5.68□□□□□ -1.5
SDF2-206ENST00000587788 CTSBP07858 339 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 SNRPB2P08579 225 aaKnown RBP5.68□□□□□ -1.5
SDF2-206ENST00000587788 CD1DP15813 335 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 CR2P20023 1033 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 ME2P23368 584 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 LORP23490 312 aaPredicted RBP5.68□□□□□ -1.5
SDF2-206ENST00000587788 HOXD9P28356 352 aaPredicted RBP5.68□□□□□ -1.5
SDF2-206ENST00000587788 SLC6A4P31645 630 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 DNAJA1P31689 397 aaKnown RBP5.68□□□□□ -1.5
SDF2-206ENST00000587788 ACVRL1P37023 503 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 HSPA13P48723 471 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 CSNK1DP48730 415 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 MRPL19P49406 292 aaKnown RBP5.68□□□□□ -1.5
SDF2-206ENST00000587788 ARL4DP49703 201 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 NUDT2P50583 147 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 ZNF140P52738 457 aaPredicted RBP5.68□□□□□ -1.5
SDF2-206ENST00000587788 EPHB1P54762 984 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 CDKN2DP55273 166 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 MAXP61244 160 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 AP1S1P61966 158 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 CYP4F8P98187 520 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 SULT2A1Q06520 285 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 TRAP1Q12931 704 aaKnown RBP5.68□□□□□ -1.5
SDF2-206ENST00000587788 CCNIQ14094 377 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 SUZ12Q15022 739 aaKnown RBP5.68□□□□□ -1.5
SDF2-206ENST00000587788 CRY1Q16526 586 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 ZNF678Q5SXM1 525 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 RBM20Q5T481 1227 aaKnown RBP5.68□□□□□ -1.5
SDF2-206ENST00000587788 IRAK1BP1Q5VVH5 260 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 LYPLAL1Q5VWZ2 237 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 TRIM68Q6AZZ1 485 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 LINC00114Q6XXX2 140 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 CERS6Q6ZMG9 384 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 ATG14Q6ZNE5 492 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 SPATA19Q7Z5L4 167 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 CUZD1Q86UP6 607 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 CFAP52Q8N1V2 620 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 PELI3Q8N2H9 469 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 SLC44A3Q8N4M1 653 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 PCYOX1LQ8NBM8 494 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 DTX3LQ8TDB6 740 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 SLC26A7Q8TE54 656 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 SH3RF2Q8TEC5 729 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 NRG4Q8WWG1 115 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 EDAQ92838 391 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 SMARCD2Q92925 531 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.68□□□□□ -1.5
SDF2-206ENST00000587788 KIAA1191Q96A73 305 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 FAM136AQ96C01 138 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 MIEF2Q96C03 454 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 ROPN1LQ96C74 230 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 RMDN1Q96DB5 314 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 RSPRY1Q96DX4 576 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 CLPTM1LQ96KA5 538 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 DNAJC1Q96KC8 554 aaKnown RBP5.68□□□□□ -1.5
SDF2-206ENST00000587788 BTBD9Q96Q07 612 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 SLC22A12Q96S37 553 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 CDRT15Q96T59 188 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 ECSITQ9BQ95 431 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 FEM1AQ9BSK4 669 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 NUSAP1Q9BXS6 441 aaKnown RBP5.68□□□□□ -1.5
SDF2-206ENST00000587788 KLHL4Q9C0H6 718 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 GSTO2Q9H4Y5 243 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 WDR41Q9HAD4 459 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 SMPD4Q9NXE4 827 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 PDP2Q9P2J9 529 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 PSMD13Q9UNM6 376 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 COPG1Q9Y678 874 aaKnown RBP5.68□□□□□ -1.5
SDF2-206ENST00000587788 OAS3Q9Y6K5 1087 aaKnown RBP5.68□□□□□ -1.5
SDF2-206ENST00000587788 ATG2BQ96BY7 2078 aa5.68□□□□□ -1.5
SDF2-206ENST00000587788 EML5Q05BV3 1969 aa5.67□□□□□ -1.5
SDF2-206ENST00000587788 FANCMQ8IYD8 2048 aa5.67□□□□□ -1.5
SDF2-206ENST00000587788 LOC100289279A0A1B0GTE1 492 aa5.67□□□□□ -1.5
SDF2-206ENST00000587788 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.67□□□□□ -1.5
SDF2-206ENST00000587788 A0A1W2PQ67 120 aa5.67□□□□□ -1.5
SDF2-206ENST00000587788 DYTNA2CJ06 578 aa5.67□□□□□ -1.5
SDF2-206ENST00000587788 TMEM221A6NGB7 291 aa5.67□□□□□ -1.5
SDF2-206ENST00000587788 ANKRD66B4E2M5 251 aa5.67□□□□□ -1.5
SDF2-206ENST00000587788 H0YJX3 145 aa5.67□□□□□ -1.5
SDF2-206ENST00000587788 H3BMM5 538 aa5.67□□□□□ -1.5
SDF2-206ENST00000587788 STX16-NPEPL1H3BU86 382 aa5.67□□□□□ -1.5
SDF2-206ENST00000587788 M0R296 226 aa5.67□□□□□ -1.5
SDF2-206ENST00000587788 STX16O14662 325 aa5.67□□□□□ -1.5
SDF2-206ENST00000587788 AZIN1O14977 448 aa5.67□□□□□ -1.5
SDF2-206ENST00000587788 STX7O15400 261 aaKnown RBP5.67□□□□□ -1.5
SDF2-206ENST00000587788 TSPAN3O60637 253 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms