RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 STAMBPL1Q96FJ0 436 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 CD180Q99467 661 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 FAM167BQ9BTA0 163 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 ZMYND15Q9H091 742 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 MVB12BQ9H7P6 319 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 SLC40A1Q9NP59 571 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 THSD1Q9NS62 852 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 ZNF624Q9P2J8 865 aaPredicted RBP13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 PDP2Q9P2J9 529 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 EPHA6Q9UF33 1036 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 MN1Q10571 1320 aaPredicted RBP13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 FAM149AA5PLN7 773 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 OR51F1A6NGY5 319 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 ZNF500O60304 480 aaPredicted RBP13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 AVILO75366 819 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 UBXN7O94888 489 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 ESR1P03372 595 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 RPN2P04844 631 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 ITGA2BP08514 1039 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 ANKRD34CP0C6C1 535 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 THRAP10827 490 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 RPL10P27635 214 aaKnown RBP13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 RBMS1P29558 406 aaKnown RBP13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 PBLDP30039 288 aaPredicted RBP13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 RPL21P46778 160 aaKnown RBP13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 ARCN1P48444 511 aaKnown RBP13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 CDKN1CP49918 316 aaPredicted RBP13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 CAV1Q03135 178 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 FRG1Q14331 258 aaKnown RBP13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 CLCA4Q14CN2 919 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 SEPT7Q16181 437 aaKnown RBP13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 LONRF1Q17RB8 773 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 ZNF658BQ4V348 819 aaPredicted RBP13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 SYTL3Q4VX76 610 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 SPANXN3Q5MJ09 141 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 GALNT7Q86SF2 657 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 CFAP206Q8IYR0 622 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 OTUD6BQ8N6M0 293 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 MNS1Q8NEH6 495 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 ZCCHC14Q8WYQ9 949 aaKnown RBP13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 ELMO1Q92556 727 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 CCDC97Q96F63 343 aaPredicted RBP13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 SIGLEC10Q96LC7 697 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 C12orf66Q96MD2 445 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 EBNA1BP2Q99848 306 aaKnown RBP13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 ERP44Q9BS26 406 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 FAM129AQ9BZQ8 928 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 DPH5Q9H2P9 285 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 KIR3DX1Q9H7L2 352 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 SCHIP1Q9P0W5 487 aaPredicted RBP13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 WHRNQ9P202 907 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 KLHL42Q9P2K6 505 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 SNX24Q9Y343 169 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 UTP11Q9Y3A2 253 aaKnown RBP13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 MAD1L1Q9Y6D9 718 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 FAM169AQ9Y6X4 670 aa13.51□□□□□ -0.25
PRKCSH-202ENST00000585540 ESPNB1AK53 854 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 C1QTNF9BB2RNN3 333 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 PLD2O14939 933 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 EIF3HO15372 352 aaKnown RBP eCLIP13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 APOA4P06727 396 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 C1QTNF9P0C862 333 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 ARNTP27540 789 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 CD82P27701 267 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 MAPK9P45984 424 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 CAPZBP47756 277 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 ITGA8P53708 1063 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 DRG2P55039 364 aaKnown RBP13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 GABREP78334 506 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 HIF1AQ16665 826 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 AMZ1Q400G9 498 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 NEPROQ6NW34 567 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 FAM83HQ6ZRV2 1179 aaPredicted RBP13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 KIAA0408Q6ZU52 694 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 RAB11FIP2Q7L804 512 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 PDZD3Q86UT5 571 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 OOSP2Q86WS3 158 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 PROSER1Q86XN7 944 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 CILP2Q8IUL8 1156 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 SFTPA2Q8IWL1 248 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 NOA1Q8NC60 698 aaKnown RBP13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 PHC3Q8NDX5 983 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 ACVR1CQ8NER5 493 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 SNIP1Q8TAD8 396 aaKnown RBP13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 ZDHHC12Q96GR4 267 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 FOXP3Q9BZS1 431 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 WWP1Q9H0M0 922 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 OR52A5Q9H2C5 316 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 IMP3Q9NV31 184 aaKnown RBP13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 POLG2Q9UHN1 485 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 WDR37Q9Y2I8 494 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 PCDHGA7Q9Y5G6 932 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 AK5Q9Y6K8 562 aa13.5□□□□□ -0.25
PRKCSH-202ENST00000585540 ZCWPW2A0A1B0GU75 182 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 UBA6A0AVT1 1052 aaPredicted RBP13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 SLC5A10A0PJK1 596 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 CTAGE15A4D2H0 777 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 OR52A4PA6NMU1 304 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 TP73O15350 636 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms