RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 LIN7AO14910 233 aaPredicted RBP9.35□□□□□ -0.91
RFFL-210ENST00000582308 KPNA5O15131 536 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 RGS16O15492 202 aaPredicted RBP9.35□□□□□ -0.91
RFFL-210ENST00000582308 SLCO2B1O94956 709 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 TSPAN12O95859 305 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 MT-ND3P03897 115 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 MYZAPP0CAP1 466 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 SLC35E2BP0CK96 405 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 KRT15P19012 456 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 AK4P27144 223 aaPredicted RBP9.35□□□□□ -0.91
RFFL-210ENST00000582308 CRABP2P29373 138 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 PDHA2P29803 388 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 NBL1P41271 181 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 PREPP48147 710 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 RXRGP48443 463 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 BLKP51451 505 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 CLCNKAP51800 687 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 IRX4P78413 519 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 HSPA14Q0VDF9 509 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 PDAP1Q13442 181 aaKnown RBP9.35□□□□□ -0.91
RFFL-210ENST00000582308 C1orf61Q13536 156 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 BOP1Q14137 746 aaKnown RBP9.35□□□□□ -0.91
RFFL-210ENST00000582308 ZNF423Q2M1K9 1284 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 HLA-BQ31612 363 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 TRIM61Q5EBN2 209 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 PRRT3Q5FWE3 981 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 PLEKHS1Q5SXH7 462 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 UGT3A1Q6NUS8 523 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 TRABD2AQ86V40 505 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 CPNE9Q8IYJ1 553 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 GPBAR1Q8TDU6 330 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 EEF1AKMT1Q8WVE0 214 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 ANKRD49Q8WVL7 239 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 ASZ1Q8WWH4 475 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 ARL8AQ96BM9 186 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 PGM2Q96G03 612 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 RUFY1Q96T51 708 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 LRRC61Q9BV99 259 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 COG4Q9H9E3 785 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 POPDC3Q9HBV1 291 aa9.35□□□□□ -0.91
RFFL-210ENST00000582308 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.35□□□□□ -0.91
RFFL-210ENST00000582308 APOBEC3BQ9UH17 382 aaKnown RBP9.35□□□□□ -0.91
RFFL-210ENST00000582308 RIF1Q5UIP0 2472 aaKnown RBP9.34□□□□□ -0.91
RFFL-210ENST00000582308 ASXL3Q9C0F0 2248 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 KLHL33A6NCF5 533 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 ARHGAP33O14559 1287 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 ATP8B1O43520 1251 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 KCNJ13O60928 360 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 PIAS2O75928 621 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 EML2O95834 649 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 TOP3BO95985 862 aaKnown RBP9.34□□□□□ -0.91
RFFL-210ENST00000582308 MPOP05164 745 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 APOA4P06727 396 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 RETP07949 1114 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 CCDC166P0CW27 439 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 PYGBP11216 843 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 CTSEP14091 401 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 CREB1P16220 341 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 ZNF37AP17032 561 aaPredicted RBP9.34□□□□□ -0.91
RFFL-210ENST00000582308 VCLP18206 1134 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 IL2P60568 153 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 HNRNPKP61978 463 aaKnown RBP eCLIP9.34□□□□□ -0.91
RFFL-210ENST00000582308 IRF9Q00978 393 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 DLG1Q12959 904 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 BNIP3Q12983 259 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 LRP8Q14114 963 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 TTLL9Q3SXZ7 439 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 TCEAL6Q6IPX3 200 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 SLC30A9Q6PML9 568 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 CYHR1Q6ZMK1 362 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 RAPH1Q70E73 1250 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 EXOC3L1Q86VI1 746 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 SRRM1Q8IYB3 904 aaKnown RBP9.34□□□□□ -0.91
RFFL-210ENST00000582308 SLC22A15Q8IZD6 547 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 CENPLQ8N0S6 344 aaPredicted RBP9.34□□□□□ -0.91
RFFL-210ENST00000582308 CNPY4Q8N129 248 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 PLD6Q8N2A8 252 aaKnown RBP9.34□□□□□ -0.91
RFFL-210ENST00000582308 SPATA6LQ8N4H0 392 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 ZNF548Q8NEK5 533 aaPredicted RBP9.34□□□□□ -0.91
RFFL-210ENST00000582308 OR2I1PQ8NGU4 316 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 ACMSDQ8TDX5 336 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 TCEAL3Q969E4 200 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 TMEM159Q96B96 161 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 UBXN10Q96LJ8 280 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 ELF4Q99607 663 aaPredicted RBP9.34□□□□□ -0.91
RFFL-210ENST00000582308 VPS11Q9H270 941 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 OR52A5Q9H2C5 316 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 OSGEPL1Q9H4B0 414 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 IL21RQ9HBE5 538 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 GPAMQ9HCL2 828 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 PRDM8Q9NQV8 689 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 UCKL1Q9NWZ5 548 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 TBC1D29Q9UFV1 150 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 TSR3Q9UJK0 312 aaKnown RBP9.34□□□□□ -0.91
RFFL-210ENST00000582308 TLK1Q9UKI8 766 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 IKZF3Q9UKT9 509 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 ACSL5Q9ULC5 683 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 ACOT9Q9Y305 439 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 RP1P56715 2156 aa9.34□□□□□ -0.91
RFFL-210ENST00000582308 A0A087X1B8 175 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms