RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 INSM1Q01101 510 aaPredicted RBP15.07■□□□□ 0
IFT20-208ENST00000578985 HHEXQ03014 270 aa15.07■□□□□ 0
IFT20-208ENST00000578985 RPA4Q13156 261 aa15.07■□□□□ 0
IFT20-208ENST00000578985 NR1D2Q14995 579 aa15.07■□□□□ 0
IFT20-208ENST00000578985 RPE65Q16518 533 aa15.07■□□□□ 0
IFT20-208ENST00000578985 ZNF789Q5FWF6 425 aa15.07■□□□□ 0
IFT20-208ENST00000578985 TRMT10BQ6PF06 316 aaKnown RBP15.07■□□□□ 0
IFT20-208ENST00000578985 PALM2Q8IXS6 379 aa15.07■□□□□ 0
IFT20-208ENST00000578985 KRT222Q8N1A0 295 aa15.07■□□□□ 0
IFT20-208ENST00000578985 LRRN4CLQ8ND94 238 aa15.07■□□□□ 0
IFT20-208ENST00000578985 LKAAEAR1Q8TD35 194 aa15.07■□□□□ 0
IFT20-208ENST00000578985 IFT81Q8WYA0 676 aa15.07■□□□□ 0
IFT20-208ENST00000578985 SH3KBP1Q96B97 665 aa15.07■□□□□ 0
IFT20-208ENST00000578985 CXorf40BQ96DE9 158 aa15.07■□□□□ 0
IFT20-208ENST00000578985 BIRC8Q96P09 236 aa15.07■□□□□ 0
IFT20-208ENST00000578985 PANX3Q96QZ0 392 aa15.07■□□□□ 0
IFT20-208ENST00000578985 FAM129AQ9BZQ8 928 aa15.07■□□□□ 0
IFT20-208ENST00000578985 FBXO6Q9NRD1 293 aaPredicted RBP15.07■□□□□ 0
IFT20-208ENST00000578985 PCDHB1Q9Y5F3 818 aa15.07■□□□□ 0
IFT20-208ENST00000578985 H3BMM5 538 aa15.06■□□□□ 0
IFT20-208ENST00000578985 ZW10O43264 779 aa15.06■□□□□ 0
IFT20-208ENST00000578985 B4GAT1O43505 415 aa15.06■□□□□ 0
IFT20-208ENST00000578985 ESR1P03372 595 aa15.06■□□□□ 0
IFT20-208ENST00000578985 RHOXF2BP0C7M4 288 aa15.06■□□□□ 0
IFT20-208ENST00000578985 PKMP14618 531 aaKnown RBP15.06■□□□□ 0
IFT20-208ENST00000578985 ALDH4A1P30038 563 aa15.06■□□□□ 0
IFT20-208ENST00000578985 MAGEA4P43358 317 aa15.06■□□□□ 0
IFT20-208ENST00000578985 GPR3P46089 330 aa15.06■□□□□ 0
IFT20-208ENST00000578985 PREPP48147 710 aa15.06■□□□□ 0
IFT20-208ENST00000578985 CARSP49589 748 aaKnown RBP15.06■□□□□ 0
IFT20-208ENST00000578985 ADARP55265 1226 aaKnown RBP15.06■□□□□ 0
IFT20-208ENST00000578985 OR1D5P58170 312 aa15.06■□□□□ 0
IFT20-208ENST00000578985 CCL7P80098 99 aa15.06■□□□□ 0
IFT20-208ENST00000578985 MPP1Q00013 466 aa15.06■□□□□ 0
IFT20-208ENST00000578985 BOP1Q14137 746 aaKnown RBP15.06■□□□□ 0
IFT20-208ENST00000578985 BRD3Q15059 726 aa15.06■□□□□ 0
IFT20-208ENST00000578985 SYTL3Q4VX76 610 aa15.06■□□□□ 0
IFT20-208ENST00000578985 CTSL3PQ5NE16 218 aa15.06■□□□□ 0
IFT20-208ENST00000578985 NAPRTQ6XQN6 538 aa15.06■□□□□ 0
IFT20-208ENST00000578985 CAPN12Q6ZSI9 719 aa15.06■□□□□ 0
IFT20-208ENST00000578985 SPRED1Q7Z699 444 aa15.06■□□□□ 0
IFT20-208ENST00000578985 ZNF761Q86XN6 746 aaPredicted RBP15.06■□□□□ 0
IFT20-208ENST00000578985 C2CD4AQ8NCU7 369 aaPredicted RBP15.06■□□□□ 0
IFT20-208ENST00000578985 SPDYE1Q8NFV5 336 aaPredicted RBP15.06■□□□□ 0
IFT20-208ENST00000578985 WDR48Q8TAF3 677 aa15.06■□□□□ 0
IFT20-208ENST00000578985 GSDMBQ8TAX9 411 aa15.06■□□□□ 0
IFT20-208ENST00000578985 RMDN2Q96LZ7 410 aa15.06■□□□□ 0
IFT20-208ENST00000578985 INSM2Q96T92 566 aaPredicted RBP15.06■□□□□ 0
IFT20-208ENST00000578985 SLC38A3Q99624 504 aa15.06■□□□□ 0
IFT20-208ENST00000578985 RHOXF2Q9BQY4 288 aa15.06■□□□□ 0
IFT20-208ENST00000578985 OR52A5Q9H2C5 316 aa15.06■□□□□ 0
IFT20-208ENST00000578985 LRRN3Q9H3W5 708 aa15.06■□□□□ 0
IFT20-208ENST00000578985 SYNDIG1Q9H7V2 258 aa15.06■□□□□ 0
IFT20-208ENST00000578985 POT1Q9NUX5 634 aa15.06■□□□□ 0
IFT20-208ENST00000578985 MTRF1LQ9UGC7 380 aaKnown RBP15.06■□□□□ 0
IFT20-208ENST00000578985 ZFHX4Q86UP3 3567 aa15.05■□□□□ -0
IFT20-208ENST00000578985 MED19A0JLT2 244 aaPredicted RBP15.05■□□□□ -0
IFT20-208ENST00000578985 SLC5A10A0PJK1 596 aa15.05■□□□□ -0
IFT20-208ENST00000578985 HYAL3O43820 417 aaPredicted RBP15.05■□□□□ -0
IFT20-208ENST00000578985 TOP3BO95985 862 aaKnown RBP15.05■□□□□ -0
IFT20-208ENST00000578985 RPLP0P05388 317 aaKnown RBP15.05■□□□□ -0
IFT20-208ENST00000578985 APOA4P06727 396 aa15.05■□□□□ -0
IFT20-208ENST00000578985 MTHFD1P11586 935 aaKnown RBP15.05■□□□□ -0
IFT20-208ENST00000578985 AOAHP28039 575 aa15.05■□□□□ -0
IFT20-208ENST00000578985 PDHA2P29803 388 aa15.05■□□□□ -0
IFT20-208ENST00000578985 CCR7P32248 378 aa15.05■□□□□ -0
IFT20-208ENST00000578985 CSE1LP55060 971 aaKnown RBP15.05■□□□□ -0
IFT20-208ENST00000578985 CLDN6P56747 220 aa15.05■□□□□ -0
IFT20-208ENST00000578985 PLOD1Q02809 727 aaPredicted RBP15.05■□□□□ -0
IFT20-208ENST00000578985 MGAT5Q09328 741 aa15.05■□□□□ -0
IFT20-208ENST00000578985 TMED2Q15363 201 aa15.05■□□□□ -0
IFT20-208ENST00000578985 TEDDM1Q5T9Z0 273 aa15.05■□□□□ -0
IFT20-208ENST00000578985 HES3Q5TGS1 186 aa15.05■□□□□ -0
IFT20-208ENST00000578985 CAPRIN2Q6IMN6 1127 aaKnown RBP15.05■□□□□ -0
IFT20-208ENST00000578985 KIAA0408Q6ZU52 694 aa15.05■□□□□ -0
IFT20-208ENST00000578985 CEP128Q6ZU80 1094 aa15.05■□□□□ -0
IFT20-208ENST00000578985 TMPRSS12Q86WS5 348 aa15.05■□□□□ -0
IFT20-208ENST00000578985 CNTN4Q8IWV2 1026 aa15.05■□□□□ -0
IFT20-208ENST00000578985 GALNT15Q8N3T1 639 aa15.05■□□□□ -0
IFT20-208ENST00000578985 TMEM159Q96B96 161 aa15.05■□□□□ -0
IFT20-208ENST00000578985 C9orf72Q96LT7 481 aa15.05■□□□□ -0
IFT20-208ENST00000578985 C12orf66Q96MD2 445 aa15.05■□□□□ -0
IFT20-208ENST00000578985 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.05■□□□□ -0
IFT20-208ENST00000578985 CCDC68Q9H2F9 335 aa15.05■□□□□ -0
IFT20-208ENST00000578985 UCK1Q9HA47 277 aa15.05■□□□□ -0
IFT20-208ENST00000578985 IMP3Q9NV31 184 aaKnown RBP15.05■□□□□ -0
IFT20-208ENST00000578985 KCNK4Q9NYG8 393 aa15.05■□□□□ -0
IFT20-208ENST00000578985 MOCS1Q9NZB8 636 aa15.05■□□□□ -0
IFT20-208ENST00000578985 CFAP20Q9Y6A4 193 aaKnown RBP15.05■□□□□ -0
IFT20-208ENST00000578985 PRAMEF33A0A0G2JMD5 474 aa15.04■□□□□ -0
IFT20-208ENST00000578985 A0A1W2PQM1 296 aa15.04■□□□□ -0
IFT20-208ENST00000578985 IFRD1O00458 451 aaPredicted RBP15.04■□□□□ -0
IFT20-208ENST00000578985 NTN3O00634 580 aaPredicted RBP15.04■□□□□ -0
IFT20-208ENST00000578985 KPNA5O15131 536 aa15.04■□□□□ -0
IFT20-208ENST00000578985 CASC3O15234 703 aaKnown RBP15.04■□□□□ -0
IFT20-208ENST00000578985 NIPSNAP2O75323 286 aa15.04■□□□□ -0
IFT20-208ENST00000578985 HAUS5O94927 633 aa15.04■□□□□ -0
IFT20-208ENST00000578985 MT-CO3P00414 261 aa15.04■□□□□ -0
IFT20-208ENST00000578985 GSTA2P09210 222 aa15.04■□□□□ -0
IFT20-208ENST00000578985 JUPP14923 745 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms