RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 SYTL2Q9HCH5 934 aa13.6□□□□□ -0.23
LINC01543-201ENST00000578367 FSCN3Q9NQT6 498 aa13.6□□□□□ -0.23
LINC01543-201ENST00000578367 TRMT6Q9UJA5 497 aaKnown RBP13.6□□□□□ -0.23
LINC01543-201ENST00000578367 KCNK6Q9Y257 313 aa13.6□□□□□ -0.23
LINC01543-201ENST00000578367 MED16Q9Y2X0 877 aa13.6□□□□□ -0.23
LINC01543-201ENST00000578367 PRKAB1Q9Y478 270 aa13.6□□□□□ -0.23
LINC01543-201ENST00000578367 MYLKQ15746 1914 aa13.6□□□□□ -0.23
LINC01543-201ENST00000578367 DOCK9Q9BZ29 2069 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 IFRD1O00458 451 aaPredicted RBP13.59□□□□□ -0.23
LINC01543-201ENST00000578367 CDH16O75309 829 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 SNRPAP09012 282 aaKnown RBP13.59□□□□□ -0.23
LINC01543-201ENST00000578367 SLC35G4P0C7Q5 338 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 GIMD1P0DJR0 217 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 STMN1P16949 149 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 XRCC1P18887 633 aaPredicted RBP13.59□□□□□ -0.23
LINC01543-201ENST00000578367 HOXD11P31277 338 aaPredicted RBP13.59□□□□□ -0.23
LINC01543-201ENST00000578367 RGS4P49798 205 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 DUSP3P51452 185 aaPredicted RBP13.59□□□□□ -0.23
LINC01543-201ENST00000578367 C1orf61Q13536 156 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 NFE2L1Q14494 772 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 SMAD1Q15797 465 aaKnown RBP13.59□□□□□ -0.23
LINC01543-201ENST00000578367 BEND6Q5SZJ8 279 aaPredicted RBP13.59□□□□□ -0.23
LINC01543-201ENST00000578367 STPG1Q5TH74 334 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 CAPRIN2Q6IMN6 1127 aaKnown RBP13.59□□□□□ -0.23
LINC01543-201ENST00000578367 SLC30A9Q6PML9 568 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 MICALCLQ6ZW33 695 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 SFRP1Q8N474 314 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 NKAPQ8N5F7 415 aaKnown RBP13.59□□□□□ -0.23
LINC01543-201ENST00000578367 PNPLA1Q8N8W4 532 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 GPATCH11Q8N954 259 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 FAM46DQ8NEK8 389 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 GPR156Q8NFN8 814 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 ZDHHC1Q8WTX9 485 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 ISL2Q96A47 359 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 SH3KBP1Q96B97 665 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 PDLIM5Q96HC4 596 aaKnown RBP13.59□□□□□ -0.23
LINC01543-201ENST00000578367 ELMO2Q96JJ3 720 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 CDC6Q99741 560 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 OR52A5Q9H2C5 316 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 OSGEPL1Q9H4B0 414 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 UCK1Q9HA47 277 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 POT1Q9NUX5 634 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 UCKL1Q9NWZ5 548 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.59□□□□□ -0.23
LINC01543-201ENST00000578367 PSMC3IPQ9P2W1 217 aaPredicted RBP13.59□□□□□ -0.23
LINC01543-201ENST00000578367 TBC1D29Q9UFV1 150 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 ST14Q9Y5Y6 855 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 DMDP11532 3685 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 KNL1Q8NG31 2342 aa13.59□□□□□ -0.23
LINC01543-201ENST00000578367 EP300Q09472 2414 aaPredicted RBP13.59□□□□□ -0.23
LINC01543-201ENST00000578367 IQANK1A0A1B0GTG1 560 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 IQCF5A8MTL0 148 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 PDZK1P1A8MUH7 402 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 ZW10O43264 779 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 KDM1AO60341 852 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 SDC3O75056 442 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 NIPSNAP2O75323 286 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 RPN2P04844 631 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 MPC1LP0DKB6 136 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 CD59P13987 128 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 PNLIPP16233 465 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 AK4P27144 223 aaPredicted RBP13.58□□□□□ -0.24
LINC01543-201ENST00000578367 FASLGP48023 281 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 HSPA14Q0VDF9 509 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 PDAP1Q13442 181 aaKnown RBP13.58□□□□□ -0.24
LINC01543-201ENST00000578367 USP10Q14694 798 aaKnown RBP13.58□□□□□ -0.24
LINC01543-201ENST00000578367 ZKSCAN8Q15776 578 aaPredicted RBP13.58□□□□□ -0.24
LINC01543-201ENST00000578367 PLA2G4EQ3MJ16 856 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 RBM20Q5T481 1227 aaKnown RBP13.58□□□□□ -0.24
LINC01543-201ENST00000578367 LRIG3Q6UXM1 1119 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 UNC5DQ6UXZ4 953 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 TIFABQ6ZNK6 161 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 SLC9B2Q86UD5 537 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 PDZD3Q86UT5 571 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 CCL4L1Q8NHW4 92 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 CD200R1Q8TD46 325 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 DCAKDQ8WVC6 231 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 FOPNLQ96NB1 174 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 GPR21Q99679 349 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 SARS2Q9NP81 518 aaKnown RBP13.58□□□□□ -0.24
LINC01543-201ENST00000578367 SLC17A6Q9P2U8 582 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 CDYLQ9Y232 598 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 DNAJC16Q9Y2G8 782 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 MTO1Q9Y2Z2 717 aaKnown RBP13.58□□□□□ -0.24
LINC01543-201ENST00000578367 COLEC10Q9Y6Z7 277 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 MYO15AQ9UKN7 3530 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 PI4KAP42356 2102 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 VPS13AQ96RL7 3174 aa13.58□□□□□ -0.24
LINC01543-201ENST00000578367 ZFHX2Q9C0A1 2572 aaPredicted RBP13.58□□□□□ -0.24
LINC01543-201ENST00000578367 C4orf47A7E2U8 309 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 POC1B-GALNT4F8VUJ3 575 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 H2AFXP16104 143 aaPredicted RBP13.57□□□□□ -0.24
LINC01543-201ENST00000578367 ACADLP28330 430 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 PBLDP30039 288 aaPredicted RBP13.57□□□□□ -0.24
LINC01543-201ENST00000578367 CCNFP41002 786 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 SERPINB8P50452 374 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 CDKN2DP55273 166 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 TAS2R39P59534 338 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 IL2P60568 153 aa13.57□□□□□ -0.24
LINC01543-201ENST00000578367 RAB10P61026 200 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms