RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 H0YAE9 185 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 ARVCFO00192 962 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 UPK1AO00322 258 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 TBL1XO60907 577 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 TULP3O75386 442 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 KATNA1O75449 491 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 PGLSO95336 258 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 SNAP29O95721 258 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 MT-ND1P03886 318 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 ANXA6P08133 673 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 ZNF7P17097 686 aaPredicted RBP8.8□□□□□ -1
NCBP3-204ENST00000574911 GGT1P19440 569 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 DGKQP52824 942 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 MTPNP58546 118 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 RHOAP61586 193 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 CTBSQ01459 385 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 TWF1Q12792 350 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 RFTN2Q52LD8 501 aaPredicted RBP8.8□□□□□ -1
NCBP3-204ENST00000574911 HABP4Q5JVS0 413 aaKnown RBP8.8□□□□□ -1
NCBP3-204ENST00000574911 ATXN7L2Q5T6C5 722 aaPredicted RBP8.8□□□□□ -1
NCBP3-204ENST00000574911 PTRHD1Q6GMV3 140 aaKnown RBP8.8□□□□□ -1
NCBP3-204ENST00000574911 MILR1Q7Z6M3 343 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 GPR180Q86V85 440 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 CLVS1Q8IUQ0 354 aaPredicted RBP8.8□□□□□ -1
NCBP3-204ENST00000574911 OFCC1Q8IZS5 231 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 OR8J3Q8NGG0 315 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 LKAAEAR1Q8TD35 194 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 ISOC1Q96CN7 298 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 VPS50Q96JG6 964 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 PPP3R2Q96LZ3 170 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 RNF145Q96MT1 663 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 CCDC115Q96NT0 180 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 FEM1AQ9BSK4 669 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 IPPKQ9H8X2 491 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 EBF1Q9UH73 591 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 TSR3Q9UJK0 312 aaKnown RBP8.8□□□□□ -1
NCBP3-204ENST00000574911 FCF1Q9Y324 198 aaKnown RBP8.8□□□□□ -1
NCBP3-204ENST00000574911 CENPFP49454 3210 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 H0Y626 953 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 HOXA2O43364 376 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 ALPIP09923 528 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 HMOX2P30519 316 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 HSPA7P48741 367 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 SMU1Q2TAY7 513 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 ARMC12Q5T9G4 340 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 AADATQ8N5Z0 425 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 LEMD2Q8NC56 503 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 ALG14Q96F25 216 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 MYO19Q96H55 970 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 ZNF583Q96ND8 569 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 HBEGFQ99075 208 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 BOCQ9BWV1 1114 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 CIPCQ9C0C6 399 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 CLPBQ9H078 707 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 NSUN3Q9H649 340 aaKnown RBP8.8□□□□□ -1
NCBP3-204ENST00000574911 SOX17Q9H6I2 414 aaPredicted RBP8.8□□□□□ -1
NCBP3-204ENST00000574911 AFF4Q9UHB7 1163 aaKnown RBP8.8□□□□□ -1
NCBP3-204ENST00000574911 GNPTGQ9UJJ9 305 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 PCDHGA11Q9Y5H2 935 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 PRSS21Q9Y6M0 314 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 V9GYQ6 96 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 GFRA2O00451 464 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 LATS1O95835 1130 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 RAP2AP10114 183 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 ARL1P40616 181 aaPredicted RBP8.79□□□□□ -1
NCBP3-204ENST00000574911 AP1S1P61966 158 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 PMS2P3Q13401 168 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 DCTN2Q13561 401 aaKnown RBP8.79□□□□□ -1
NCBP3-204ENST00000574911 CDKN3Q16667 212 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 LHX8Q68G74 356 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 FAM151BQ6UXP7 276 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 SNX20Q7Z614 316 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 FAM126BQ8IXS8 530 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 RBFAQ8N0V3 343 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 UBTD2Q8WUN7 234 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 C19orf43Q9BQ61 176 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 VN1R3Q9BXE9 311 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 FAM126AQ9BYI3 521 aaPredicted RBP8.79□□□□□ -1
NCBP3-204ENST00000574911 CD244Q9BZW8 370 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 GORASP2Q9H8Y8 452 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 SMPD4Q9NXE4 827 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 VPS51Q9UID3 782 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 ZMYM5Q9UJ78 669 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 CDH7Q9ULB5 785 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 HEMK1Q9Y5R4 338 aaPredicted RBP8.79□□□□□ -1
NCBP3-204ENST00000574911 PLXNA4Q9HCM2 1894 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 TRBV5-4A0A0C4DH59 114 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.79□□□□□ -1
NCBP3-204ENST00000574911 SLC28A1O00337 649 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 RGS14O43566 566 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 DFNA5O60443 496 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 WDR47O94967 919 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 KCNH1O95259 989 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 PRAMEF1O95521 474 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 ALDH1A1P00352 501 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 SLC2A4P14672 509 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 ITGB6P18564 788 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 DGKAP23743 735 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 CSKP41240 450 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 RGS4P49798 205 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms