RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 MANEALQ5VSG8 457 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 SULT1C3Q6IMI6 304 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 KIAA1161Q6NSJ0 714 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 CYP20A1Q6UW02 462 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 SLC44A2Q8IWA5 706 aaPredicted RBP9.95□□□□□ -0.82
SMG6-213ENST00000573166 C2CD4AQ8NCU7 369 aaPredicted RBP9.95□□□□□ -0.82
SMG6-213ENST00000573166 EEF1AKMT1Q8WVE0 214 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 SEC14L1Q92503 715 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 PYCR2Q96C36 320 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 LENG8Q96PV6 779 aaPredicted RBP9.95□□□□□ -0.82
SMG6-213ENST00000573166 SMIM14Q96QK8 99 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 FAM83CQ9BQN1 747 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 THTPAQ9BU02 230 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 Q9H521 79 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 IL17CQ9P0M4 197 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 SUSD2Q9UGT4 822 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 OR1A2Q9Y585 309 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 HEBP2Q9Y5Z4 205 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 TRIP11Q15643 1979 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 URADA6NGE7 173 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 DCXO43602 365 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 PRIM2P49643 509 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 C1orf61Q13536 156 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 LPAL2Q16609 132 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 PRRT3Q5FWE3 981 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 GJD3Q8N144 294 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 TMIEQ8NEW7 156 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 KCNJ9Q92806 393 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 CNDP1Q96KN2 507 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 RANBP9Q96S59 729 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 YIPF3Q9GZM5 350 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 NOL11Q9H8H0 719 aaKnown RBP9.95□□□□□ -0.82
SMG6-213ENST00000573166 EFCAB1Q9HAE3 211 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 EIF2B4Q9UI10 523 aaKnown RBP9.95□□□□□ -0.82
SMG6-213ENST00000573166 TRAF6Q9Y4K3 522 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 ATG2BQ96BY7 2078 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 PI15O43692 258 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 VPS4BO75351 444 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 E2F6O75461 281 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 CCNDBP1O95273 360 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 PENKP01210 267 aaPredicted RBP9.95□□□□□ -0.82
SMG6-213ENST00000573166 HGFP14210 728 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 SERPINB3P29508 390 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 CCNFP41002 786 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 EIF2DP41214 584 aaKnown RBP9.95□□□□□ -0.82
SMG6-213ENST00000573166 HPCAP84074 193 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 CREB5Q02930 508 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 RGS1Q08116 209 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 CHIT1Q13231 466 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 CUZD1Q86UP6 607 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 SLC44A3Q8N4M1 653 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 EFCAB3Q8N7B9 438 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 TOE1Q96GM8 510 aaKnown RBP9.95□□□□□ -0.82
SMG6-213ENST00000573166 NOL6Q9H6R4 1146 aaKnown RBP9.95□□□□□ -0.82
SMG6-213ENST00000573166 RUBCNLQ9H714 662 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 PRSS16Q9NQE7 514 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 CCDC167Q9P0B6 97 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 PADI4Q9UM07 663 aa9.95□□□□□ -0.82
SMG6-213ENST00000573166 RP1L1Q8IWN7 2480 aaPredicted RBP9.95□□□□□ -0.82
SMG6-213ENST00000573166 A0A0G2JMZ2 1700 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 LIN7AO14910 233 aaPredicted RBP9.94□□□□□ -0.82
SMG6-213ENST00000573166 HNRNPCL1O60812 293 aaKnown RBP9.94□□□□□ -0.82
SMG6-213ENST00000573166 GUCY1B2O75343 617 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 SRFP11831 508 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 TIMP2P16035 220 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 NDUFS1P28331 727 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 CMPK1P30085 196 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 CYLC2Q14093 348 aaPredicted RBP9.94□□□□□ -0.82
SMG6-213ENST00000573166 AP5B1Q2VPB7 878 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 DNAL1Q4LDG9 190 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 C16orf89Q6UX73 402 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 HM13Q8TCT9 377 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 MAGED4Q96JG8 741 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 OR2M4Q96R27 311 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 BBS4Q96RK4 519 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 GATA5Q9BWX5 397 aaPredicted RBP9.94□□□□□ -0.82
SMG6-213ENST00000573166 SGK2Q9HBY8 427 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 IL26Q9NPH9 171 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 THAP10Q9P2Z0 257 aaPredicted RBP9.94□□□□□ -0.82
SMG6-213ENST00000573166 MTCH2Q9Y6C9 303 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 ENO4A6NNW6 628 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 A8MUI8 341 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 PRRT4C9JH25 899 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 AURKAO14965 403 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 TCEA3O75764 348 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 EGFP01133 1207 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 CSNK1DP48730 415 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 MCCD1P59942 119 aaPredicted RBP9.94□□□□□ -0.82
SMG6-213ENST00000573166 NFYCQ13952 458 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 ARL13AQ5H913 290 aaPredicted RBP9.94□□□□□ -0.82
SMG6-213ENST00000573166 ZYG11AQ6WRX3 759 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 LIPIQ6XZB0 460 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 CYP4V2Q6ZWL3 525 aaPredicted RBP9.94□□□□□ -0.82
SMG6-213ENST00000573166 BTN2A2Q8WVV5 523 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 DNASE1L2Q92874 299 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 SPDL1Q96EA4 605 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 TMEM245Q9H330 911 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 TFB2MQ9H5Q4 396 aaKnown RBP9.94□□□□□ -0.82
SMG6-213ENST00000573166 TBC1D17Q9HA65 648 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 TRIM39Q9HCM9 518 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms