RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 FAM111BQ6SJ93 734 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 ASAP3Q8TDY4 903 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 DUSP23Q9BVJ7 150 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 RC3H2Q9HBD1 1191 aaKnown RBP6.58□□□□□ -1.36
SMG1-217ENST00000569764 TXNDC16Q9P2K2 825 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 SLC13A4Q9UKG4 626 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 TRBV23-1A0A0A0MS06 115 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 C2orf92A0A1B0GVN3 265 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.57□□□□□ -1.36
SMG1-217ENST00000569764 ZBTB42B2RXF5 422 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 LATS1O95835 1130 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 RHOCP08134 193 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 CD58P19256 250 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 CD40LGP29965 261 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 GIPRP48546 466 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 BST2Q10589 180 aaKnown RBP6.57□□□□□ -1.36
SMG1-217ENST00000569764 GPS1Q13098 491 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 ZNF235Q14590 738 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 KIAA1211LQ6NV74 962 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 SCARA5Q6ZMJ2 495 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 TRAPPC11Q7Z392 1133 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 RASGEF1CQ8N431 466 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 BBS1Q8NFJ9 593 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 GPR150Q8NGU9 434 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 SH3RF2Q8TEC5 729 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 LRRC46Q96FV0 321 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 ZBTB45Q96K62 511 aaPredicted RBP6.57□□□□□ -1.36
SMG1-217ENST00000569764 HSFY1Q96LI6 401 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 SYT11Q9BT88 431 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 SLC29A3Q9BZD2 475 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 VCXQ9H320 206 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 TMEM8AQ9HCN3 771 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 WHRNQ9P202 907 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 PSMC3IPQ9P2W1 217 aaPredicted RBP6.57□□□□□ -1.36
SMG1-217ENST00000569764 PLCL2Q9UPR0 1127 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 HEY1Q9Y5J3 304 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 NUMBLQ9Y6R0 609 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 PRUNE2Q8WUY3 3088 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 ANK1P16157 1881 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 PPM1BO75688 479 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 TGM6O95932 706 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 IGSF6O95976 241 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 CHRNB1P11230 501 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 HSPA7P48741 367 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 NCKAP1LP55160 1127 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 GTF2BQ00403 316 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 TBCCQ15814 346 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 PTRHD1Q6GMV3 140 aaKnown RBP6.57□□□□□ -1.36
SMG1-217ENST00000569764 ANO7Q6IWH7 933 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 PRSS55Q6UWB4 352 aaPredicted RBP6.57□□□□□ -1.36
SMG1-217ENST00000569764 PAGE2Q7Z2X7 111 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 SLC51BQ86UW2 128 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 LNX1Q8TBB1 728 aaPredicted RBP6.57□□□□□ -1.36
SMG1-217ENST00000569764 DTD1Q8TEA8 209 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 SLC22A17Q8WUG5 538 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 SLC5A11Q8WWX8 675 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 SLC39A7Q92504 469 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 SLC25A18Q9H1K4 315 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 PDZD7Q9H5P4 517 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 SP110Q9HB58 689 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 SGK2Q9HBY8 427 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 ZNF275Q9NSD4 429 aaPredicted RBP6.57□□□□□ -1.36
SMG1-217ENST00000569764 GCNT4Q9P109 453 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 RABGEF1Q9UJ41 708 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 A0A1W2PRU2 124 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 SLC38A8A6NNN8 435 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 M0QYV0 167 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 SEMA3DO95025 777 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 ADH1BP00325 375 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 BRCC3P46736 316 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 FMO5P49326 533 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 PCYT1AP49585 367 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 SEC24CP53992 1094 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 EXOC3L4Q17RC7 722 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 SULT1C3Q6IMI6 304 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 FAM122CQ6P4D5 195 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 CCDC137Q6PK04 289 aaKnown RBP6.57□□□□□ -1.36
SMG1-217ENST00000569764 TMEM270Q6UE05 265 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 CHSY3Q70JA7 882 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 CPNE8Q86YQ8 564 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 SLC38A6Q8IZM9 456 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 OFCC1Q8IZS5 231 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 AHI1Q8N157 1196 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 CXorf40AQ8TE69 158 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 RHBDD1Q8TEB9 315 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 CAPSLQ8WWF8 208 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 ZNF516Q92618 1163 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 CLSTN3Q9BQT9 956 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 KATNBL1Q9H079 304 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 EMC7Q9NPA0 242 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 PNO1Q9NRX1 252 aaKnown RBP6.57□□□□□ -1.36
SMG1-217ENST00000569764 ASNSD1Q9NWL6 643 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 SMPD4Q9NXE4 827 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 VPS51Q9UID3 782 aa6.57□□□□□ -1.36
SMG1-217ENST00000569764 PLXNB2O15031 1838 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 WDR27A2RRH5 827 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 ARHGAP42A6NI28 874 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 SOX1O00570 391 aaPredicted RBP6.56□□□□□ -1.36
SMG1-217ENST00000569764 RASGRF2O14827 1237 aa6.56□□□□□ -1.36
SMG1-217ENST00000569764 ADAM20O43506 726 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms