RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 CDT1Q9H211 546 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 IL25Q9H293 177 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 NDST4Q9H3R1 872 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 SLC28A3Q9HAS3 691 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 SPATS2LQ9NUQ6 558 aaKnown RBP3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 TMEM51Q9NW97 253 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 HCFC1R1Q9NWW0 138 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 OCIAD1Q9NX40 245 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 ALKBH4Q9NXW9 302 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 SLC25A10Q9UBX3 287 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 SARDHQ9UL12 918 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 AGO1Q9UL18 857 aaKnown RBP3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 PROCRQ9UNN8 238 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 LYVE1Q9Y5Y7 322 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 DDX49Q9Y6V7 483 aaKnown RBP3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 NLRC5Q86WI3 1866 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 FLT1P17948 1338 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 XIRP2A4UGR9 3374 aa3.38□□□□□ -1.87
HMGB1P6-201ENST00000569046 SIP14410 1827 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 MYH7BA7E2Y1 1941 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 IGLV5-52A0A0A0MRZ9 124 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 A0A1B0GVM2 712 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 A0A1W2PQ09 198 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 A0A1W2PRG0 241 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 ARHGAP10A1A4S6 786 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 HSPB2A8KAH6 182 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 IFNL4K9M1U5 179 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 TSPAN4O14817 238 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 SLC7A4O43246 635 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 GUCY1B2O75343 617 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 ZBTB11O95625 1053 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 SPARCP09486 303 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 FCGR1AP12314 374 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 NFKBIAP25963 317 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 GCH1P30793 250 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 BSGP35613 385 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 PSMB10P40306 273 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 EIF2DP41214 584 aaKnown RBP3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 EFNA5P52803 228 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 RARSP54136 660 aaKnown RBP3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 CLDN2P57739 230 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 CCNA1P78396 465 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 COG2Q14746 738 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 NFATC4Q14934 902 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 MED22Q15528 200 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 HSPB2Q16082 182 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 EDRF1Q3B7T1 1238 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 BMP2KLQ5H9B9 411 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 GPR139Q6DWJ6 353 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 SHQ1Q6PI26 577 aaKnown RBP3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 CYP20A1Q6UW02 462 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 DEFB128Q7Z7B8 93 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 FOXP4Q8IVH2 680 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 HSCBQ8IWL3 235 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 DCP1BQ8IZD4 617 aaKnown RBP3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 CARNMT1Q8N4J0 409 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 FRMD1Q8N878 549 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 AVL9Q8NBF6 648 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 GOT1L1Q8NHS2 421 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 ARRDC2Q8TBH0 407 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 ZCCHC10Q8TBK6 192 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 ARNTL2Q8WYA1 636 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 SPATA17Q96L03 361 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 PIP5K1AQ99755 562 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 MRPL9Q9BYD2 267 aaKnown RBP3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 EDEM3Q9BZQ6 932 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 SPATC1LQ9H0A9 340 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 TRPV6Q9H1D0 765 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 ARGLU1Q9NWB6 273 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 ANKRD10Q9NXR5 420 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 PEMTQ9UBM1 199 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 NDRG3Q9UGV2 375 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 MTUS1Q9ULD2 1270 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 MTCH2Q9Y6C9 303 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 FAM169AQ9Y6X4 670 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 KIF16BQ96L93 1317 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 SYNRGQ9UMZ2 1314 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 MUC3AQ02505 3323 aa3.37□□□□□ -1.87
HMGB1P6-201ENST00000569046 LCTP09848 1927 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 BDP1A6H8Y1 2624 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 TRANK1O15050 2925 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 A8MV72 311 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 KLRF2D3W0D1 207 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 CLGNO14967 610 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 LDLRAD4O15165 306 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 KCNJ13O60928 360 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 ATP2C2O75185 946 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 FLOT1O75955 427 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 CCNDBP1O95273 360 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 URODP06132 367 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 ASGR1P07306 291 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 CA3P07451 260 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 UBTFL1P0CB47 393 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 CBSLP0DN79 551 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 FGF3P11487 239 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 RARGP13631 454 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 IL9P15248 144 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 ITGAXP20702 1163 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 MYF6P23409 242 aa3.36□□□□□ -1.87
HMGB1P6-201ENST00000569046 C21orf33P30042 268 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms