RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 MTHFD1P11586 935 aaKnown RBP4.68□□□□□ -1.66
CLK3-219ENST00000567805 SFTPCP11686 197 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 LIFP15018 202 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 ACRV1P26436 265 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 MAP4P27816 1152 aaKnown RBP4.68□□□□□ -1.66
CLK3-219ENST00000567805 NDUFS1P28331 727 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 MC4RP32245 332 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 LEPRP48357 1165 aaKnown RBP4.68□□□□□ -1.66
CLK3-219ENST00000567805 PRLHRP49683 370 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 GDF10P55107 478 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 TMPRSS15P98073 1019 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 GSTM4Q03013 218 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 ABHD18Q0P651 414 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 LAMB3Q13751 1172 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 LY6DQ14210 128 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 MAP7Q14244 749 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 SPARCL1Q14515 664 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 IL11RAQ14626 422 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 POU6F1Q14863 301 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 PLCL1Q15111 1095 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 OASLQ15646 514 aaKnown RBP4.68□□□□□ -1.66
CLK3-219ENST00000567805 IRGCQ6NXR0 463 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 ZNF662Q6ZS27 426 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 DET1Q7L5Y6 550 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 LINC00523Q86TU6 105 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 CFAP206Q8IYR0 622 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 CACNA2D3Q8IZS8 1091 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 NLGN4XQ8N0W4 816 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 NLGN4YQ8NFZ3 816 aaPredicted RBP4.68□□□□□ -1.66
CLK3-219ENST00000567805 GPR150Q8NGU9 434 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 HM13Q8TCT9 377 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 STYXQ8WUJ0 223 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 JPH3Q8WXH2 748 aaPredicted RBP4.68□□□□□ -1.66
CLK3-219ENST00000567805 KLHL6Q8WZ60 621 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 UBXN4Q92575 508 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 RSC1A1Q92681 617 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 MED8Q96G25 268 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 DNAJC1Q96KC8 554 aaKnown RBP4.68□□□□□ -1.66
CLK3-219ENST00000567805 C12orf66Q96MD2 445 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 ALS2CR12Q96Q35 445 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 CD180Q99467 661 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 COPS8Q99627 209 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 CTRCQ99895 268 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 CCM2Q9BSQ5 444 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 EFHD1Q9BUP0 239 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 SPRY4Q9C004 299 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 WWP1Q9H0M0 922 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 TRIT1Q9H3H1 467 aaKnown RBP4.68□□□□□ -1.66
CLK3-219ENST00000567805 APMAPQ9HDC9 416 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 IMP3Q9NV31 184 aaKnown RBP4.68□□□□□ -1.66
CLK3-219ENST00000567805 NLE1Q9NVX2 485 aaPredicted RBP4.68□□□□□ -1.66
CLK3-219ENST00000567805 ZDHHC3Q9NYG2 299 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 SEMA5BQ9P283 1151 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 GUCA1BQ9UMX6 200 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 PSMD13Q9UNM6 376 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 TMEM184BQ9Y519 407 aaPredicted RBP4.68□□□□□ -1.66
CLK3-219ENST00000567805 KCTD3Q9Y597 815 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 HEBP2Q9Y5Z4 205 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 COLEC10Q9Y6Z7 277 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 AHCTF1Q8WYP5 2266 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 TENM4Q6N022 2769 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 PIEZO2Q9H5I5 2752 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 ATRXP46100 2492 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 IGHV5-51A0A0C4DH38 117 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 OR5K3A6NET4 321 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 TLCD2A6NGC4 264 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 MROH6A6NGR9 719 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 ZNF891A8MT65 544 aaPredicted RBP4.67□□□□□ -1.66
CLK3-219ENST00000567805 E7EVH7 732 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 SMAPO00193 183 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 QSOX1O00391 747 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 CCL22O00626 93 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 SUN1O94901 812 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 AP2A2O94973 939 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 DLGAP3O95886 979 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 GAS8O95995 478 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 IFNB1P01574 187 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 CCDC175P0C221 793 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 FGF5P12034 268 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 TPH1P17752 444 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 NELFEP18615 380 aaKnown RBP4.67□□□□□ -1.66
CLK3-219ENST00000567805 WT1P19544 449 aaPredicted RBP4.67□□□□□ -1.66
CLK3-219ENST00000567805 PSMA3P25788 255 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 MSNP26038 577 aaKnown RBP4.67□□□□□ -1.66
CLK3-219ENST00000567805 FDFT1P37268 417 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 STAT5AP42229 794 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 NSG1P42857 185 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 CD151P48509 253 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 LMAN1P49257 510 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 SEPHS1P49903 392 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 SH3BP2P78314 561 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 MC1RQ01726 317 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 CACNG1Q06432 222 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 FOXM1Q08050 763 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 CDH17Q12864 832 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 RPA4Q13156 261 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 SEPT6Q14141 434 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 KRT33BQ14525 404 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 ITIH4Q14624 930 aa4.67□□□□□ -1.66
CLK3-219ENST00000567805 RPS6KA1Q15418 735 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms