RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 IPMKQ8NFU5 416 aa22.34■■□□□ 1.17
CNEP1R1-209ENST00000567712 TFB1MQ8WVM0 346 aaKnown RBP22.34■■□□□ 1.17
CNEP1R1-209ENST00000567712 C12orf66Q96MD2 445 aa22.34■■□□□ 1.17
CNEP1R1-209ENST00000567712 CD180Q99467 661 aa22.34■■□□□ 1.17
CNEP1R1-209ENST00000567712 GORASP1Q9BQQ3 440 aa22.34■■□□□ 1.17
CNEP1R1-209ENST00000567712 KCND1Q9NSA2 647 aa22.34■■□□□ 1.17
CNEP1R1-209ENST00000567712 LUZP4Q9P127 313 aa22.34■■□□□ 1.17
CNEP1R1-209ENST00000567712 SLC24A2Q9UI40 661 aa22.34■■□□□ 1.17
CNEP1R1-209ENST00000567712 VPS4AQ9UN37 437 aa22.34■■□□□ 1.17
CNEP1R1-209ENST00000567712 PCDHGA9Q9Y5G4 932 aaKnown RBP22.34■■□□□ 1.17
CNEP1R1-209ENST00000567712 SSU72P8A0A1W2PR75 194 aa22.33■■□□□ 1.17
CNEP1R1-209ENST00000567712 CST8O60676 142 aa22.33■■□□□ 1.17
CNEP1R1-209ENST00000567712 ARL4DP49703 201 aa22.33■■□□□ 1.17
CNEP1R1-209ENST00000567712 RPS15P62841 145 aaKnown RBP22.33■■□□□ 1.17
CNEP1R1-209ENST00000567712 TPM4P67936 248 aa22.33■■□□□ 1.17
CNEP1R1-209ENST00000567712 XRCC4Q13426 336 aa22.33■■□□□ 1.17
CNEP1R1-209ENST00000567712 DAAM2Q86T65 1068 aa22.33■■□□□ 1.17
CNEP1R1-209ENST00000567712 ZC3H18Q86VM9 953 aaKnown RBP22.33■■□□□ 1.17
CNEP1R1-209ENST00000567712 Q8NA96 180 aa22.33■■□□□ 1.17
CNEP1R1-209ENST00000567712 RMDN2Q96LZ7 410 aa22.33■■□□□ 1.17
CNEP1R1-209ENST00000567712 FCRL5Q96RD9 977 aa22.33■■□□□ 1.17
CNEP1R1-209ENST00000567712 ACSS2Q9NR19 701 aa22.33■■□□□ 1.17
CNEP1R1-209ENST00000567712 SMOXQ9NWM0 555 aa22.33■■□□□ 1.17
CNEP1R1-209ENST00000567712 PLEKHB1Q9UF11 243 aaPredicted RBP22.33■■□□□ 1.17
CNEP1R1-209ENST00000567712 ARL5AQ9Y689 179 aa22.33■■□□□ 1.17
CNEP1R1-209ENST00000567712 MDC1Q14676 2089 aaKnown RBP22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 MGAT4DA6NG13 374 aa22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 SNRNP200O75643 2136 aaKnown RBP22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 AGFG2O95081 481 aa22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 ZBTB11O95625 1053 aaPredicted RBP22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 CAPN1P07384 714 aa22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 POLR2CP19387 275 aaPredicted RBP22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 COMTP21964 271 aa22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 LPOP22079 712 aaPredicted RBP22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 OLIG2Q13516 323 aa22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 ZNF789Q5FWF6 425 aa22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 FHL5Q5TD97 284 aa22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 IZUMO3Q5VZ72 239 aa22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 ZDHHC20Q5W0Z9 365 aa22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 KAZNQ674X7 775 aa22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 OOSP2Q86WS3 158 aa22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 EFCAB3Q8N7B9 438 aa22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 ENDOVQ8N8Q3 282 aaKnown RBP22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 ZNF398Q8TD17 642 aa22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 HAUS1Q96CS2 278 aa22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 TLR10Q9BXR5 811 aa22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 ZCCHC2Q9C0B9 1178 aaKnown RBP22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 GOLPH3Q9H4A6 298 aa22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 DEF6Q9H4E7 631 aa22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 C10orf88Q9H8K7 445 aa22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 KLHL8Q9P2G9 620 aaPredicted RBP22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 BTRCQ9Y297 605 aa22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.32■■□□□ 1.16
CNEP1R1-209ENST00000567712 AKR1B10O60218 316 aa22.31■■□□□ 1.16
CNEP1R1-209ENST00000567712 CEACAM4O75871 244 aa22.31■■□□□ 1.16
CNEP1R1-209ENST00000567712 AGTP01019 485 aa22.31■■□□□ 1.16
CNEP1R1-209ENST00000567712 NR2C2P49116 596 aa22.31■■□□□ 1.16
CNEP1R1-209ENST00000567712 SPOCD1Q6ZMY3 1216 aa22.31■■□□□ 1.16
CNEP1R1-209ENST00000567712 PID1Q7Z2X4 250 aa22.31■■□□□ 1.16
CNEP1R1-209ENST00000567712 DSELQ8IZU8 1212 aa22.31■■□□□ 1.16
CNEP1R1-209ENST00000567712 FDCSPQ8NFU4 85 aa22.31■■□□□ 1.16
CNEP1R1-209ENST00000567712 OR8K1Q8NGG5 319 aa22.31■■□□□ 1.16
CNEP1R1-209ENST00000567712 OR2L2Q8NH16 312 aa22.31■■□□□ 1.16
CNEP1R1-209ENST00000567712 SEC14L1Q92503 715 aa22.31■■□□□ 1.16
CNEP1R1-209ENST00000567712 KIR3DX1Q9H7L2 352 aa22.31■■□□□ 1.16
CNEP1R1-209ENST00000567712 DDX56Q9NY93 547 aaKnown RBP22.31■■□□□ 1.16
CNEP1R1-209ENST00000567712 HACD3Q9P035 362 aa22.31■■□□□ 1.16
CNEP1R1-209ENST00000567712 SLC9B1P1A6NJY1 282 aa22.3■■□□□ 1.16
CNEP1R1-209ENST00000567712 PRAMEF1O95521 474 aa22.3■■□□□ 1.16
CNEP1R1-209ENST00000567712 POLBP06746 335 aa22.3■■□□□ 1.16
CNEP1R1-209ENST00000567712 MSH3P20585 1137 aa22.3■■□□□ 1.16
CNEP1R1-209ENST00000567712 AKT1P31749 480 aa22.3■■□□□ 1.16
CNEP1R1-209ENST00000567712 RORAP35398 523 aa22.3■■□□□ 1.16
CNEP1R1-209ENST00000567712 ITGA1P56199 1179 aa22.3■■□□□ 1.16
CNEP1R1-209ENST00000567712 PDE1BQ01064 536 aa22.3■■□□□ 1.16
CNEP1R1-209ENST00000567712 ITGA9Q13797 1035 aa22.3■■□□□ 1.16
CNEP1R1-209ENST00000567712 OR4E2Q8NGC2 313 aa22.3■■□□□ 1.16
CNEP1R1-209ENST00000567712 OR1L3Q8NH93 324 aa22.3■■□□□ 1.16
CNEP1R1-209ENST00000567712 NUDT9Q9BW91 350 aa22.3■■□□□ 1.16
CNEP1R1-209ENST00000567712 MFRPQ9BY79 579 aa22.3■■□□□ 1.16
CNEP1R1-209ENST00000567712 SOHLH2Q9NX45 425 aa22.3■■□□□ 1.16
CNEP1R1-209ENST00000567712 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.3■■□□□ 1.16
CNEP1R1-209ENST00000567712 PKP3Q9Y446 797 aa22.3■■□□□ 1.16
CNEP1R1-209ENST00000567712 ANKRD12Q6UB98 2062 aa22.3■■□□□ 1.16
CNEP1R1-209ENST00000567712 ITPR2Q14571 2701 aa22.3■■□□□ 1.16
CNEP1R1-209ENST00000567712 MEN1O00255 615 aa22.29■■□□□ 1.16
CNEP1R1-209ENST00000567712 HLA-DPA1P20036 260 aa22.29■■□□□ 1.16
CNEP1R1-209ENST00000567712 MPP3Q13368 585 aa22.29■■□□□ 1.16
CNEP1R1-209ENST00000567712 MRPL49Q13405 166 aaKnown RBP22.29■■□□□ 1.16
CNEP1R1-209ENST00000567712 INPP5JQ15735 1006 aaPredicted RBP22.29■■□□□ 1.16
CNEP1R1-209ENST00000567712 LONRF2Q1L5Z9 754 aa22.29■■□□□ 1.16
CNEP1R1-209ENST00000567712 FAM198BQ6UWH4 519 aa22.29■■□□□ 1.16
CNEP1R1-209ENST00000567712 RHOT2Q8IXI1 618 aa22.29■■□□□ 1.16
CNEP1R1-209ENST00000567712 RBMXL3Q8N7X1 1067 aaKnown RBP22.29■■□□□ 1.16
CNEP1R1-209ENST00000567712 LRFN5Q96NI6 719 aa22.29■■□□□ 1.16
CNEP1R1-209ENST00000567712 NHEJ1Q9H9Q4 299 aaPredicted RBP22.29■■□□□ 1.16
CNEP1R1-209ENST00000567712 LATS2Q9NRM7 1088 aa22.29■■□□□ 1.16
CNEP1R1-209ENST00000567712 FKBPLQ9UIM3 349 aa22.29■■□□□ 1.16
CNEP1R1-209ENST00000567712 POMT2Q9UKY4 750 aa22.29■■□□□ 1.16
CNEP1R1-209ENST00000567712 TCFL5Q9UL49 500 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms