RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 CTIFO43310 598 aaKnown RBP8□□□□□ -1.13
CDH13-208ENST00000566333 GPC4O75487 556 aa8□□□□□ -1.13
CDH13-208ENST00000566333 FAM155BO75949 473 aa8□□□□□ -1.13
CDH13-208ENST00000566333 WISP3O95389 354 aaPredicted RBP8□□□□□ -1.13
CDH13-208ENST00000566333 GSTM1P09488 218 aa8□□□□□ -1.13
CDH13-208ENST00000566333 MYF5P13349 255 aa8□□□□□ -1.13
CDH13-208ENST00000566333 F3P13726 295 aa8□□□□□ -1.13
CDH13-208ENST00000566333 PKMP14618 531 aaKnown RBP8□□□□□ -1.13
CDH13-208ENST00000566333 ITGB6P18564 788 aa8□□□□□ -1.13
CDH13-208ENST00000566333 FDXRP22570 491 aa8□□□□□ -1.13
CDH13-208ENST00000566333 RPL10P27635 214 aaKnown RBP8□□□□□ -1.13
CDH13-208ENST00000566333 GCAP28676 217 aa8□□□□□ -1.13
CDH13-208ENST00000566333 PDHA2P29803 388 aa8□□□□□ -1.13
CDH13-208ENST00000566333 FMO4P31512 558 aa8□□□□□ -1.13
CDH13-208ENST00000566333 PGGT1BP53609 377 aa8□□□□□ -1.13
CDH13-208ENST00000566333 LIMK2P53671 638 aa8□□□□□ -1.13
CDH13-208ENST00000566333 CSE1LP55060 971 aaKnown RBP8□□□□□ -1.13
CDH13-208ENST00000566333 MAZP56270 477 aaKnown RBP8□□□□□ -1.13
CDH13-208ENST00000566333 UBE2IP63279 158 aaKnown RBP8□□□□□ -1.13
CDH13-208ENST00000566333 GSTM4Q03013 218 aa8□□□□□ -1.13
CDH13-208ENST00000566333 BOP1Q14137 746 aaKnown RBP8□□□□□ -1.13
CDH13-208ENST00000566333 CLCA4Q14CN2 919 aa8□□□□□ -1.13
CDH13-208ENST00000566333 SEPT7Q16181 437 aaKnown RBP8□□□□□ -1.13
CDH13-208ENST00000566333 INAVAQ3KP66 663 aa8□□□□□ -1.13
CDH13-208ENST00000566333 PTRHD1Q6GMV3 140 aaKnown RBP8□□□□□ -1.13
CDH13-208ENST00000566333 EMBQ6PCB8 327 aa8□□□□□ -1.13
CDH13-208ENST00000566333 OGFOD3Q6PK18 319 aa8□□□□□ -1.13
CDH13-208ENST00000566333 WASH2PQ6VEQ5 465 aa8□□□□□ -1.13
CDH13-208ENST00000566333 TRMT10CQ7L0Y3 403 aaKnown RBP8□□□□□ -1.13
CDH13-208ENST00000566333 STRA8Q7Z7C7 330 aa8□□□□□ -1.13
CDH13-208ENST00000566333 PDZD3Q86UT5 571 aa8□□□□□ -1.13
CDH13-208ENST00000566333 PPM1NQ8N819 430 aa8□□□□□ -1.13
CDH13-208ENST00000566333 ARL10Q8N8L6 244 aa8□□□□□ -1.13
CDH13-208ENST00000566333 FAM46DQ8NEK8 389 aa8□□□□□ -1.13
CDH13-208ENST00000566333 UHMK1Q8TAS1 419 aaKnown RBP8□□□□□ -1.13
CDH13-208ENST00000566333 SLC37A2Q8TED4 501 aa8□□□□□ -1.13
CDH13-208ENST00000566333 ZDHHC1Q8WTX9 485 aa8□□□□□ -1.13
CDH13-208ENST00000566333 SLC44A1Q8WWI5 657 aa8□□□□□ -1.13
CDH13-208ENST00000566333 ELMO1Q92556 727 aa8□□□□□ -1.13
CDH13-208ENST00000566333 CDKL2Q92772 493 aa8□□□□□ -1.13
CDH13-208ENST00000566333 GLMNQ92990 594 aa8□□□□□ -1.13
CDH13-208ENST00000566333 CAVIN3Q969G5 261 aa8□□□□□ -1.13
CDH13-208ENST00000566333 ATXN7L3BQ96GX2 97 aa8□□□□□ -1.13
CDH13-208ENST00000566333 APOLD1Q96LR9 279 aa8□□□□□ -1.13
CDH13-208ENST00000566333 PAFAH2Q99487 392 aa8□□□□□ -1.13
CDH13-208ENST00000566333 GPR22Q99680 433 aa8□□□□□ -1.13
CDH13-208ENST00000566333 RBBP8Q99708 897 aa8□□□□□ -1.13
CDH13-208ENST00000566333 OLFM1Q99784 485 aa8□□□□□ -1.13
CDH13-208ENST00000566333 CPNE1Q99829 537 aa8□□□□□ -1.13
CDH13-208ENST00000566333 DHRS4Q9BTZ2 278 aa8□□□□□ -1.13
CDH13-208ENST00000566333 DUSP23Q9BVJ7 150 aa8□□□□□ -1.13
CDH13-208ENST00000566333 RHOJQ9H4E5 214 aa8□□□□□ -1.13
CDH13-208ENST00000566333 WASH6PQ9NQA3 447 aa8□□□□□ -1.13
CDH13-208ENST00000566333 TOR4AQ9NXH8 423 aa8□□□□□ -1.13
CDH13-208ENST00000566333 NSMCE4AQ9NXX6 385 aa8□□□□□ -1.13
CDH13-208ENST00000566333 SIRPGQ9P1W8 387 aa8□□□□□ -1.13
CDH13-208ENST00000566333 CORO1CQ9ULV4 474 aaPredicted RBP8□□□□□ -1.13
CDH13-208ENST00000566333 KNTC1P50748 2209 aa8□□□□□ -1.13
CDH13-208ENST00000566333 FRYQ5TBA9 3013 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 FREM2Q5SZK8 3169 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 A0A087WUV0 522 aaPredicted RBP7.99□□□□□ -1.13
CDH13-208ENST00000566333 PRAMEF33A0A0G2JMD5 474 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 PDZK1P1A8MUH7 402 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 LIN7AO14910 233 aaPredicted RBP7.99□□□□□ -1.13
CDH13-208ENST00000566333 PFDN6O15212 129 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 CASC3O15234 703 aaKnown RBP7.99□□□□□ -1.13
CDH13-208ENST00000566333 KCNJ13O60928 360 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 SLCO2B1O94956 709 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 TRIM16O95361 564 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 TSPAN12O95859 305 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 SHBGP04278 402 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 ALPPL2P10696 532 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 CKMT1AP12532 417 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 VCLP18206 1134 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 CD9P21926 228 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 IDSP22304 550 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 ACADLP28330 430 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 ATP5DP30049 168 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 PHBP35232 272 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 GP5P40197 560 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 FASLGP48023 281 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 ACADVLP49748 655 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 CSRP3P50461 194 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 RPA4Q13156 261 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 DNAJC3Q13217 504 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 ZNF460Q14592 562 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 NR1D2Q14995 579 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 RSPO4Q2I0M5 234 aaPredicted RBP7.99□□□□□ -1.13
CDH13-208ENST00000566333 SYTL3Q4VX76 610 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 C14orf28Q4W4Y0 310 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.99□□□□□ -1.13
CDH13-208ENST00000566333 HECTD2Q5U5R9 776 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 CAPRIN2Q6IMN6 1127 aaKnown RBP7.99□□□□□ -1.13
CDH13-208ENST00000566333 DUS1LQ6P1R4 473 aaKnown RBP7.99□□□□□ -1.13
CDH13-208ENST00000566333 GUSBP11Q6P575 273 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 IYDQ6PHW0 289 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 ABRAXAS1Q6UWZ7 409 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 ZNF438Q7Z4V0 828 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 RASGRP3Q8IV61 690 aa7.99□□□□□ -1.13
CDH13-208ENST00000566333 CTAGE3PQ8IX95 158 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms