RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 FBLL1A6NHQ2 334 aaKnown RBP3.04□□□□□ -1.92
CHD9-216ENST00000565803 SH2D7A6NKC9 451 aaPredicted RBP3.04□□□□□ -1.92
CHD9-216ENST00000565803 CALUO43852 315 aaPredicted RBP3.04□□□□□ -1.92
CHD9-216ENST00000565803 CD1AP06126 327 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 RD3LP0DJH9 198 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 CALM1P0DP23 149 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 CALM2P0DP24 149 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 CALM3P0DP25 149 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 DRD2P14416 443 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 CPB1P15086 417 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 PTPN1P18031 435 aaKnown RBP3.04□□□□□ -1.92
CHD9-216ENST00000565803 DRD1P21728 446 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 TUBG1P23258 451 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 TBXAS1P24557 533 aaPredicted RBP3.04□□□□□ -1.92
CHD9-216ENST00000565803 IL13P35225 146 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 CASP3P42574 277 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 POU3F4P49335 361 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 FLT3LGP49771 235 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 SERPINH1P50454 418 aaKnown RBP3.04□□□□□ -1.92
CHD9-216ENST00000565803 TUBB4BP68371 445 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 CSNK2A1P68400 391 aaPredicted RBP3.04□□□□□ -1.92
CHD9-216ENST00000565803 NIPAL4Q0D2K0 466 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 TP53BP2Q13625 1128 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 AP5B1Q2VPB7 878 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 CYP27C1Q4G0S4 372 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 IQCCQ4KMZ1 466 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 PRAMEF8Q5VWM4 474 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 CARD17Q5XLA6 110 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 LYSMD3Q7Z3D4 306 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 SLC46A3Q7Z3Q1 461 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 GPR142Q7Z601 462 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 PIGWQ7Z7B1 504 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 LRRC8AQ8IWT6 810 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 FNDC5Q8NAU1 212 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 SMYD1Q8NB12 490 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 CSNK2A3Q8NEV1 391 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 SLC24A4Q8NFF2 622 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 OR4A15Q8NGL6 344 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 OR6S1Q8NH40 331 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 RAB3IL1Q8TBN0 382 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 ENKURQ8TC29 256 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 LKAAEAR1Q8TD35 194 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 TANKQ92844 425 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 SEMA4DQ92854 862 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 SPSB4Q96A44 273 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 DGCR14Q96DF8 476 aaKnown RBP3.04□□□□□ -1.92
CHD9-216ENST00000565803 SLC47A1Q96FL8 570 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 RCC1LQ96I51 464 aaKnown RBP3.04□□□□□ -1.92
CHD9-216ENST00000565803 MRGPRX4Q96LA9 322 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 INSM2Q96T92 566 aaPredicted RBP3.04□□□□□ -1.92
CHD9-216ENST00000565803 SAV1Q9H4B6 383 aaPredicted RBP3.04□□□□□ -1.92
CHD9-216ENST00000565803 KCNK13Q9HB14 408 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 DDX4Q9NQI0 724 aaKnown RBP3.04□□□□□ -1.92
CHD9-216ENST00000565803 TUBG2Q9NRH3 451 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 RXFP3Q9NSD7 469 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 MTCH1Q9NZJ7 389 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 KCND2Q9NZV8 630 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 MARCH2Q9P0N8 246 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 TJP2Q9UDY2 1190 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 SCOCQ9UIL1 159 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 ADAM28Q9UKQ2 775 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 WBP11Q9Y2W2 641 aaKnown RBP3.04□□□□□ -1.92
CHD9-216ENST00000565803 SF3B6Q9Y3B4 125 aaKnown RBP3.04□□□□□ -1.92
CHD9-216ENST00000565803 CFAP20Q9Y6A4 193 aaKnown RBP3.04□□□□□ -1.92
CHD9-216ENST00000565803 MAU2Q9Y6X3 613 aa3.04□□□□□ -1.92
CHD9-216ENST00000565803 KAT6AQ92794 2004 aa3.03□□□□□ -1.92
CHD9-216ENST00000565803 UBA6A0AVT1 1052 aaPredicted RBP3.03□□□□□ -1.92
CHD9-216ENST00000565803 TMEM8BA6NDV4 472 aa3.03□□□□□ -1.92
CHD9-216ENST00000565803 ANKRD61A6NGH8 418 aa3.03□□□□□ -1.92
CHD9-216ENST00000565803 OR6C70A6NIJ9 312 aa3.03□□□□□ -1.92
CHD9-216ENST00000565803 M0QYG6 137 aa3.03□□□□□ -1.92
CHD9-216ENST00000565803 QSOX1O00391 747 aa3.03□□□□□ -1.92
CHD9-216ENST00000565803 CXCL11O14625 94 aa3.03□□□□□ -1.92
CHD9-216ENST00000565803 HAT1O14929 419 aa3.03□□□□□ -1.92
CHD9-216ENST00000565803 BCAT2O15382 392 aaPredicted RBP3.03□□□□□ -1.92
CHD9-216ENST00000565803 SH3BGRLO75368 114 aa3.03□□□□□ -1.92
CHD9-216ENST00000565803 NDUFS6O75380 124 aaKnown RBP3.03□□□□□ -1.92
CHD9-216ENST00000565803 NME6O75414 186 aaPredicted RBP3.03□□□□□ -1.92
CHD9-216ENST00000565803 RHBDL1O75783 438 aa3.03□□□□□ -1.92
CHD9-216ENST00000565803 GAAP10253 952 aa3.03□□□□□ -1.92
CHD9-216ENST00000565803 SELLP14151 372 aa3.03□□□□□ -1.92
CHD9-216ENST00000565803 DARSP14868 501 aaKnown RBP3.03□□□□□ -1.92
CHD9-216ENST00000565803 EGR1P18146 543 aa3.03□□□□□ -1.92
CHD9-216ENST00000565803 TNNI1P19237 187 aa3.03□□□□□ -1.92
CHD9-216ENST00000565803 MARCKSP29966 332 aaPredicted RBP3.03□□□□□ -1.92
CHD9-216ENST00000565803 PTDSS1P48651 473 aaKnown RBP3.03□□□□□ -1.92
CHD9-216ENST00000565803 CASP4P49662 377 aa3.03□□□□□ -1.92
CHD9-216ENST00000565803 HNRNPFP52597 415 aaKnown RBP3.03□□□□□ -1.92
CHD9-216ENST00000565803 UCP3P55916 312 aa3.03□□□□□ -1.92
CHD9-216ENST00000565803 TSPAN5P62079 268 aa3.03□□□□□ -1.92
CHD9-216ENST00000565803 POLR2GP62487 172 aaKnown RBP eCLIP3.03□□□□□ -1.92
CHD9-216ENST00000565803 TAP1Q03518 808 aa3.03□□□□□ -1.92
CHD9-216ENST00000565803 KCNMA1Q12791 1236 aa3.03□□□□□ -1.92
CHD9-216ENST00000565803 NONOQ15233 471 aaKnown RBP eCLIP3.03□□□□□ -1.92
CHD9-216ENST00000565803 SGCBQ16585 318 aa3.03□□□□□ -1.92
CHD9-216ENST00000565803 ST3GAL2Q16842 350 aa3.03□□□□□ -1.92
CHD9-216ENST00000565803 SGSM1Q2NKQ1 1148 aa3.03□□□□□ -1.92
CHD9-216ENST00000565803 HNRNPA1L2Q32P51 320 aaKnown RBP3.03□□□□□ -1.92
CHD9-216ENST00000565803 ZMAT1Q5H9K5 638 aa3.03□□□□□ -1.92
CHD9-216ENST00000565803 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms