RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 A8MV72 311 aaPredicted RBP20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 SLC7A4O43246 635 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 PAPSS2O95340 614 aaPredicted RBP20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 CHRNA1P02708 482 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 PCMT1P22061 227 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 CDK5R2Q13319 367 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 CRY1Q16526 586 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 IRAK1BP1Q5VVH5 260 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 P2RY8Q86VZ1 359 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 MIB1Q86YT6 1006 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 C10orf111Q8N326 155 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 CDCA5Q96FF9 252 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 MFSD1Q9H3U5 465 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 MAGEL2Q9UJ55 1249 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 FAM92AA1XBS5 289 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 BCKDKO14874 412 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 MLYCDO95822 493 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 C1QCP02747 245 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 MT-ND2P03891 347 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 MMP2P08253 660 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 MYCLP1P12525 358 aaPredicted RBP20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 ERVPABLB-1P60509 514 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 HMGCS1Q01581 520 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 PTPRNQ16849 979 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 LETMD1Q6P1Q0 360 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 MICU2Q8IYU8 434 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 PGBD5Q8N414 524 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 KRTCAP2Q8N6L1 136 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 SMARCD1Q96GM5 515 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 ZNF599Q96NL3 588 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 RNF167Q9H6Y7 350 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 NMUR1Q9HB89 426 aa20.2■□□□□ 0.82
MAP1LC3B-206ENST00000564844 TRIP12Q14669 1992 aaPredicted RBP20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 GABRDO14764 452 aa20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 SNPHO15079 494 aa20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 IRAK2O43187 625 aa20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 SLC25A27O95847 323 aa20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 POMCP01189 267 aa20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 RPL38P63173 70 aaKnown RBP20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 EPS8Q12929 822 aa20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 AP5B1Q2VPB7 878 aa20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 FAM174BQ3ZCQ3 159 aa20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 LRRTM3Q86VH5 581 aa20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 IMP4Q96G21 291 aaKnown RBP20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 ZBTB20Q9HC78 741 aaPredicted RBP20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 CATSPERZQ9NTU4 200 aa20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 HACD3Q9P035 362 aa20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 PGLSO95336 258 aa20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 ZNF682O95780 498 aa20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 DNTTP04053 509 aa20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 ERVK-8P63133 956 aa20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 AGAP7PQ5VUJ5 663 aa20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 CYP20A1Q6UW02 462 aa20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 LEMD2Q8NC56 503 aa20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 OR4L1Q8NH43 312 aa20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 EEF1AKMT1Q8WVE0 214 aa20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 FUBP1Q96AE4 644 aaKnown RBP20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 ASPSCR1Q9BZE9 553 aa20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 VNN3Q9NY84 501 aa20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 PCDHB14Q9Y5E9 798 aa20.19■□□□□ 0.82
MAP1LC3B-206ENST00000564844 B3GAT3O94766 335 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 MYL3P08590 195 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 SCNN1GP51170 649 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 COPZ1P61923 177 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 FOXM1Q08050 763 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 SLC14A2Q15849 920 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 TIGD5Q53EQ6 642 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 UBE2UQ5VVX9 321 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 THOC7Q6I9Y2 204 aaKnown RBP20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 MRNIPQ6NTE8 343 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 GPRIN3Q6ZVF9 776 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 MCFD2Q8NI22 146 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 TP63Q9H3D4 680 aaPredicted RBP20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 ACTL8Q9H568 366 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 MRM3Q9HC36 420 aaKnown RBP20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 SLC6A13Q9NSD5 602 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 INTS6Q9UL03 887 aaKnown RBP20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 PAPPA2Q9BXP8 1791 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 SSC5DA1L4H1 1573 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 FAM234BA2RU67 622 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 MUSKO15146 869 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 SMIM10L2AP0DMW4 78 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 SMIM10L2BP0DMW5 78 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 GRIK1P39086 918 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 DCTP40126 519 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 GDF5P43026 501 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 HK3P52790 923 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 AHSA2Q719I0 299 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 CCDC103Q8IW40 242 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 RMDN1Q96DB5 314 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 PGAP3Q96FM1 320 aaPredicted RBP20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 CNDP2Q96KP4 475 aaKnown RBP20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 FARSBQ9NSD9 589 aaKnown RBP20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 ANKMY1Q9P2S6 941 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 GGT1P19440 569 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 CD40LGP29965 261 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 MASP1P48740 699 aa20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 CLK1P49759 484 aaKnown RBP20.18■□□□□ 0.82
MAP1LC3B-206ENST00000564844 RENBPP51606 427 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms