RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 HOMER3Q9NSC5 361 aa17.43■□□□□ 0.38
CMTM3-204ENST00000562357 EPHA6Q9UF33 1036 aa17.43■□□□□ 0.38
CMTM3-204ENST00000562357 PPP2R2CQ9Y2T4 447 aa17.43■□□□□ 0.38
CMTM3-204ENST00000562357 CFAP20Q9Y6A4 193 aaKnown RBP17.43■□□□□ 0.38
CMTM3-204ENST00000562357 NBEAQ8NFP9 2946 aa17.42■□□□□ 0.38
CMTM3-204ENST00000562357 ZNF106Q9H2Y7 1883 aaKnown RBP17.42■□□□□ 0.38
CMTM3-204ENST00000562357 IGLV3-16A0A075B6K0 115 aa17.42■□□□□ 0.38
CMTM3-204ENST00000562357 TRBV5-4A0A0C4DH59 114 aa17.42■□□□□ 0.38
CMTM3-204ENST00000562357 MROH6A6NGR9 719 aa17.42■□□□□ 0.38
CMTM3-204ENST00000562357 EFSO43281 561 aa17.42■□□□□ 0.38
CMTM3-204ENST00000562357 CEP104O60308 925 aa17.42■□□□□ 0.38
CMTM3-204ENST00000562357 RAD1O60671 282 aa17.42■□□□□ 0.38
CMTM3-204ENST00000562357 AP2A2O94973 939 aa17.42■□□□□ 0.38
CMTM3-204ENST00000562357 NSG1P42857 185 aa17.42■□□□□ 0.38
CMTM3-204ENST00000562357 LEPRP48357 1165 aaKnown RBP17.42■□□□□ 0.38
CMTM3-204ENST00000562357 ARL4DP49703 201 aa17.42■□□□□ 0.38
CMTM3-204ENST00000562357 CCDC38Q502W7 563 aa17.42■□□□□ 0.38
CMTM3-204ENST00000562357 LYPLAL1Q5VWZ2 237 aa17.42■□□□□ 0.38
CMTM3-204ENST00000562357 KIAA1614Q5VZ46 1190 aa17.42■□□□□ 0.38
CMTM3-204ENST00000562357 DRICH1Q6PGQ1 229 aaPredicted RBP17.42■□□□□ 0.38
CMTM3-204ENST00000562357 NLRP9Q7RTR0 991 aa17.42■□□□□ 0.38
CMTM3-204ENST00000562357 NAT14Q8WUY8 206 aa17.42■□□□□ 0.38
CMTM3-204ENST00000562357 UBXN4Q92575 508 aa17.42■□□□□ 0.38
CMTM3-204ENST00000562357 NKD1Q969G9 470 aa17.42■□□□□ 0.38
CMTM3-204ENST00000562357 INSM2Q96T92 566 aaPredicted RBP17.42■□□□□ 0.38
CMTM3-204ENST00000562357 TRIT1Q9H3H1 467 aaKnown RBP17.42■□□□□ 0.38
CMTM3-204ENST00000562357 SMARCAL1Q9NZC9 954 aa17.42■□□□□ 0.38
CMTM3-204ENST00000562357 AP3B1O00203 1094 aa17.41■□□□□ 0.38
CMTM3-204ENST00000562357 ADRA1DP25100 572 aa17.41■□□□□ 0.38
CMTM3-204ENST00000562357 PPARGP37231 505 aaPredicted RBP17.41■□□□□ 0.38
CMTM3-204ENST00000562357 PRAMEP78395 509 aa17.41■□□□□ 0.38
CMTM3-204ENST00000562357 BASP1P80723 227 aaKnown RBP17.41■□□□□ 0.38
CMTM3-204ENST00000562357 C19orf57Q0VDD7 668 aa17.41■□□□□ 0.38
CMTM3-204ENST00000562357 ITIH4Q14624 930 aa17.41■□□□□ 0.38
CMTM3-204ENST00000562357 DNTTIP2Q5QJE6 756 aaKnown RBP17.41■□□□□ 0.38
CMTM3-204ENST00000562357 AFTPHQ6ULP2 937 aa17.41■□□□□ 0.38
CMTM3-204ENST00000562357 NLGN4XQ8N0W4 816 aa17.41■□□□□ 0.38
CMTM3-204ENST00000562357 PPHLN1Q8NEY8 458 aaKnown RBP17.41■□□□□ 0.38
CMTM3-204ENST00000562357 SPDYE1Q8NFV5 336 aaPredicted RBP17.41■□□□□ 0.38
CMTM3-204ENST00000562357 NLGN4YQ8NFZ3 816 aaPredicted RBP17.41■□□□□ 0.38
CMTM3-204ENST00000562357 RANBP9Q96S59 729 aa17.41■□□□□ 0.38
CMTM3-204ENST00000562357 CD180Q99467 661 aa17.41■□□□□ 0.38
CMTM3-204ENST00000562357 EFHD1Q9BUP0 239 aa17.41■□□□□ 0.38
CMTM3-204ENST00000562357 KIR3DX1Q9H7L2 352 aa17.41■□□□□ 0.38
CMTM3-204ENST00000562357 COG4Q9H9E3 785 aa17.41■□□□□ 0.38
CMTM3-204ENST00000562357 DRG1Q9Y295 367 aaKnown RBP17.41■□□□□ 0.38
CMTM3-204ENST00000562357 PCDHGA4Q9Y5G9 962 aa17.41■□□□□ 0.38
CMTM3-204ENST00000562357 UBA6A0AVT1 1052 aaPredicted RBP17.4■□□□□ 0.38
CMTM3-204ENST00000562357 OR5K3A6NET4 321 aa17.4■□□□□ 0.38
CMTM3-204ENST00000562357 SGTAO43765 313 aa17.4■□□□□ 0.38
CMTM3-204ENST00000562357 STK17BO94768 372 aa17.4■□□□□ 0.38
CMTM3-204ENST00000562357 FTH1P02794 183 aa17.4■□□□□ 0.38
CMTM3-204ENST00000562357 ETS1P14921 441 aa17.4■□□□□ 0.38
CMTM3-204ENST00000562357 MAP4P27816 1152 aaKnown RBP17.4■□□□□ 0.38
CMTM3-204ENST00000562357 CDKN1CP49918 316 aaPredicted RBP17.4■□□□□ 0.38
CMTM3-204ENST00000562357 ARSDP51689 593 aa17.4■□□□□ 0.38
CMTM3-204ENST00000562357 PRKAA1Q13131 559 aa17.4■□□□□ 0.38
CMTM3-204ENST00000562357 RPA4Q13156 261 aa17.4■□□□□ 0.38
CMTM3-204ENST00000562357 SRSF6Q13247 344 aaKnown RBP17.4■□□□□ 0.38
CMTM3-204ENST00000562357 IL11RAQ14626 422 aa17.4■□□□□ 0.38
CMTM3-204ENST00000562357 DBN1Q16643 649 aa17.4■□□□□ 0.38
CMTM3-204ENST00000562357 TSTD2Q5T7W7 516 aa17.4■□□□□ 0.38
CMTM3-204ENST00000562357 DUS1LQ6P1R4 473 aaKnown RBP17.4■□□□□ 0.38
CMTM3-204ENST00000562357 CERS6Q6ZMG9 384 aa17.4■□□□□ 0.38
CMTM3-204ENST00000562357 OR6P1Q8NGX9 317 aa17.4■□□□□ 0.38
CMTM3-204ENST00000562357 RMDN2Q96LZ7 410 aa17.4■□□□□ 0.38
CMTM3-204ENST00000562357 OR6C1Q96RD1 312 aa17.4■□□□□ 0.38
CMTM3-204ENST00000562357 ARHGAP9Q9BRR9 750 aa17.4■□□□□ 0.38
CMTM3-204ENST00000562357 TLR10Q9BXR5 811 aa17.4■□□□□ 0.38
CMTM3-204ENST00000562357 APMAPQ9HDC9 416 aa17.4■□□□□ 0.38
CMTM3-204ENST00000562357 CASS4Q9NQ75 786 aa17.4■□□□□ 0.38
CMTM3-204ENST00000562357 EIF2B3Q9NR50 452 aaKnown RBP17.4■□□□□ 0.38
CMTM3-204ENST00000562357 HRASLS2Q9NWW9 162 aa17.4■□□□□ 0.38
CMTM3-204ENST00000562357 SIDT1Q9NXL6 827 aaKnown RBP17.4■□□□□ 0.38
CMTM3-204ENST00000562357 SLC24A2Q9UI40 661 aa17.4■□□□□ 0.38
CMTM3-204ENST00000562357 RIMKLBQ9ULI2 386 aa17.4■□□□□ 0.38
CMTM3-204ENST00000562357 ATRXP46100 2492 aa17.39■□□□□ 0.37
CMTM3-204ENST00000562357 BPTFQ12830 3046 aa17.39■□□□□ 0.37
CMTM3-204ENST00000562357 CCDC162PA2VCL2 907 aa17.39■□□□□ 0.37
CMTM3-204ENST00000562357 OR56A5P0C7T3 313 aa17.39■□□□□ 0.37
CMTM3-204ENST00000562357 CXCR5P32302 372 aa17.39■□□□□ 0.37
CMTM3-204ENST00000562357 RPL22P35268 128 aaKnown RBP17.39■□□□□ 0.37
CMTM3-204ENST00000562357 SIX1Q15475 284 aaPredicted RBP17.39■□□□□ 0.37
CMTM3-204ENST00000562357 AARS2Q5JTZ9 985 aaKnown RBP17.39■□□□□ 0.37
CMTM3-204ENST00000562357 CAPRIN2Q6IMN6 1127 aaKnown RBP17.39■□□□□ 0.37
CMTM3-204ENST00000562357 PRUNE1Q86TP1 453 aa17.39■□□□□ 0.37
CMTM3-204ENST00000562357 KMT5CQ86Y97 462 aa17.39■□□□□ 0.37
CMTM3-204ENST00000562357 RASGRP3Q8IV61 690 aa17.39■□□□□ 0.37
CMTM3-204ENST00000562357 PIANPQ8IYJ0 282 aa17.39■□□□□ 0.37
CMTM3-204ENST00000562357 CLDN19Q8N6F1 224 aa17.39■□□□□ 0.37
CMTM3-204ENST00000562357 SIDT2Q8NBJ9 832 aaKnown RBP17.39■□□□□ 0.37
CMTM3-204ENST00000562357 ACVR1CQ8NER5 493 aa17.39■□□□□ 0.37
CMTM3-204ENST00000562357 KLHL6Q8WZ60 621 aa17.39■□□□□ 0.37
CMTM3-204ENST00000562357 TTC9Q92623 222 aa17.39■□□□□ 0.37
CMTM3-204ENST00000562357 PEX13Q92968 403 aa17.39■□□□□ 0.37
CMTM3-204ENST00000562357 HDAC10Q969S8 669 aa17.39■□□□□ 0.37
CMTM3-204ENST00000562357 FERD3LQ96RJ6 166 aa17.39■□□□□ 0.37
CMTM3-204ENST00000562357 TSSK1BQ9BXA7 367 aa17.39■□□□□ 0.37
CMTM3-204ENST00000562357 ULBP3Q9BZM4 244 aa17.39■□□□□ 0.37
CMTM3-204ENST00000562357 GPN2Q9H9Y4 310 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms