RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 HEBP2Q9Y5Z4 205 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 COMMD10Q9Y6G5 202 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 TEX264Q9Y6I9 313 aa13.73□□□□□ -0.21
PKNOX1-209ENST00000560448 TMX2-CTNND1H3BSU7 103 aa13.72□□□□□ -0.21
PKNOX1-209ENST00000560448 ESR1P03372 595 aa13.72□□□□□ -0.21
PKNOX1-209ENST00000560448 PMS2P54278 862 aa13.72□□□□□ -0.21
PKNOX1-209ENST00000560448 GABPB1Q06547 395 aaPredicted RBP13.72□□□□□ -0.21
PKNOX1-209ENST00000560448 SQSTM1Q13501 440 aa13.72□□□□□ -0.21
PKNOX1-209ENST00000560448 CRYMQ14894 314 aa13.72□□□□□ -0.21
PKNOX1-209ENST00000560448 TCEA2Q15560 299 aa13.72□□□□□ -0.21
PKNOX1-209ENST00000560448 PLA2G4EQ3MJ16 856 aa13.72□□□□□ -0.21
PKNOX1-209ENST00000560448 BBS9Q3SYG4 887 aa13.72□□□□□ -0.21
PKNOX1-209ENST00000560448 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.72□□□□□ -0.21
PKNOX1-209ENST00000560448 KIAA0408Q6ZU52 694 aa13.72□□□□□ -0.21
PKNOX1-209ENST00000560448 DET1Q7L5Y6 550 aa13.72□□□□□ -0.21
PKNOX1-209ENST00000560448 OTUD6BQ8N6M0 293 aa13.72□□□□□ -0.21
PKNOX1-209ENST00000560448 SLC37A2Q8TED4 501 aa13.72□□□□□ -0.21
PKNOX1-209ENST00000560448 UBLCP1Q8WVY7 318 aaPredicted RBP13.72□□□□□ -0.21
PKNOX1-209ENST00000560448 ARL8AQ96BM9 186 aa13.72□□□□□ -0.21
PKNOX1-209ENST00000560448 CCDC3Q9BQI4 270 aa13.72□□□□□ -0.21
PKNOX1-209ENST00000560448 CAAP1Q9H8G2 361 aa13.72□□□□□ -0.21
PKNOX1-209ENST00000560448 ZC3H7BQ9UGR2 993 aaKnown RBP13.72□□□□□ -0.21
PKNOX1-209ENST00000560448 DNAJC16Q9Y2G8 782 aa13.72□□□□□ -0.21
PKNOX1-209ENST00000560448 PLEKHM1Q9Y4G2 1056 aa13.72□□□□□ -0.21
PKNOX1-209ENST00000560448 NEUROG3Q9Y4Z2 214 aa13.72□□□□□ -0.21
PKNOX1-209ENST00000560448 BPTFQ12830 3046 aa13.71□□□□□ -0.21
PKNOX1-209ENST00000560448 LILRA5A6NI73 299 aa13.71□□□□□ -0.22
PKNOX1-209ENST00000560448 GOLGA8KD6RF30 607 aa13.71□□□□□ -0.22
PKNOX1-209ENST00000560448 GSTA2P09210 222 aa13.71□□□□□ -0.22
PKNOX1-209ENST00000560448 NUDT17P0C025 328 aa13.71□□□□□ -0.22
PKNOX1-209ENST00000560448 SLC35G4P0C7Q5 338 aa13.71□□□□□ -0.22
PKNOX1-209ENST00000560448 NFE2L1Q14494 772 aa13.71□□□□□ -0.22
PKNOX1-209ENST00000560448 SLMAPQ14BN4 828 aa13.71□□□□□ -0.22
PKNOX1-209ENST00000560448 TTMPQ5BVD1 217 aa13.71□□□□□ -0.22
PKNOX1-209ENST00000560448 STEAP4Q687X5 459 aa13.71□□□□□ -0.22
PKNOX1-209ENST00000560448 KCNMB4Q86W47 210 aa13.71□□□□□ -0.22
PKNOX1-209ENST00000560448 CNTN4Q8IWV2 1026 aa13.71□□□□□ -0.22
PKNOX1-209ENST00000560448 TRIM48Q8IWZ4 208 aa13.71□□□□□ -0.22
PKNOX1-209ENST00000560448 AGGF1Q8N302 714 aaeCLIP13.71□□□□□ -0.22
PKNOX1-209ENST00000560448 CLDN19Q8N6F1 224 aa13.71□□□□□ -0.22
PKNOX1-209ENST00000560448 CCDC74AQ96AQ1 378 aa13.71□□□□□ -0.22
PKNOX1-209ENST00000560448 DEPDC7Q96QD5 511 aa13.71□□□□□ -0.22
PKNOX1-209ENST00000560448 P2RY12Q9H244 342 aa13.71□□□□□ -0.22
PKNOX1-209ENST00000560448 PRDM8Q9NQV8 689 aa13.71□□□□□ -0.22
PKNOX1-209ENST00000560448 C20orf96Q9NUD7 363 aaPredicted RBP13.71□□□□□ -0.22
PKNOX1-209ENST00000560448 CPNE7Q9UBL6 633 aa13.71□□□□□ -0.22
PKNOX1-209ENST00000560448 RNF215Q9Y6U7 377 aa13.71□□□□□ -0.22
PKNOX1-209ENST00000560448 CACNA1AO00555 2505 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 IFRD1O00458 451 aaPredicted RBP13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 NTN3O00634 580 aaPredicted RBP13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 SNX2O60749 519 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 VIPP01282 170 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 ELK3P41970 407 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 UBE2IP63279 158 aaKnown RBP13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 INSM1Q01101 510 aaPredicted RBP13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 ZNF844Q08AG5 666 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 PDIA2Q13087 525 aaKnown RBP13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 SPIDRQ14159 915 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 TMED2Q15363 201 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 ZNF658BQ4V348 819 aaPredicted RBP13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 CDCP2Q5VXM1 449 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 ZNF470Q6ECI4 717 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 PTRHD1Q6GMV3 140 aaKnown RBP13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 CES3Q6UWW8 571 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 DHRS13Q6UX07 377 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 CYS1Q717R9 158 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 SPRED1Q7Z699 444 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 CFAP206Q8IYR0 622 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 DCBLD1Q8N8Z6 715 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 OR10G6Q8NH81 332 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 GSDMBQ8TAX9 411 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 ASZ1Q8WWH4 475 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 LPGAT1Q92604 370 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 CXorf40BQ96DE9 158 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 CERS2Q96G23 380 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 FCRL3Q96P31 734 aaPredicted RBP13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 RUFY1Q96T51 708 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 SLC38A3Q99624 504 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 COG4Q9H9E3 785 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 TMBIM4Q9HC24 238 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 NSMCE4AQ9NXX6 385 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 MARCH4Q9P2E8 410 aaPredicted RBP13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 KLHL42Q9P2K6 505 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 ANGPTL2Q9UKU9 493 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 CORO1CQ9ULV4 474 aaPredicted RBP13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 WASF3Q9UPY6 502 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 CLCA2Q9UQC9 943 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 COLEC10Q9Y6Z7 277 aa13.7□□□□□ -0.22
PKNOX1-209ENST00000560448 KDM1AO60341 852 aa13.69□□□□□ -0.22
PKNOX1-209ENST00000560448 SPAG6O75602 509 aa13.69□□□□□ -0.22
PKNOX1-209ENST00000560448 APOA4P06727 396 aa13.69□□□□□ -0.22
PKNOX1-209ENST00000560448 PRSS56P0CW18 603 aa13.69□□□□□ -0.22
PKNOX1-209ENST00000560448 BRAFP15056 766 aa13.69□□□□□ -0.22
PKNOX1-209ENST00000560448 RPL10P27635 214 aaKnown RBP13.69□□□□□ -0.22
PKNOX1-209ENST00000560448 MAZP56270 477 aaKnown RBP13.69□□□□□ -0.22
PKNOX1-209ENST00000560448 FOXC1Q12948 553 aa13.69□□□□□ -0.22
PKNOX1-209ENST00000560448 SEMA3AQ14563 771 aa13.69□□□□□ -0.22
PKNOX1-209ENST00000560448 MSS51Q4VC12 460 aa13.69□□□□□ -0.22
PKNOX1-209ENST00000560448 SYTL3Q4VX76 610 aa13.69□□□□□ -0.22
PKNOX1-209ENST00000560448 PERM1Q5SV97 790 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms