RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 ANKS6Q68DC2 871 aa12.31□□□□□ -0.44
LRRC28-214ENST00000559433 IRGCQ6NXR0 463 aa12.31□□□□□ -0.44
LRRC28-214ENST00000559433 DUS1LQ6P1R4 473 aaKnown RBP12.31□□□□□ -0.44
LRRC28-214ENST00000559433 KLHL35Q6PF15 583 aa12.31□□□□□ -0.44
LRRC28-214ENST00000559433 INO80CQ6PI98 192 aaPredicted RBP12.31□□□□□ -0.44
LRRC28-214ENST00000559433 XKR5Q6UX68 686 aa12.31□□□□□ -0.44
LRRC28-214ENST00000559433 C4orf22Q6V702 233 aa12.31□□□□□ -0.44
LRRC28-214ENST00000559433 CFAP206Q8IYR0 622 aa12.31□□□□□ -0.44
LRRC28-214ENST00000559433 LILRA3Q8N6C8 439 aaPredicted RBP12.31□□□□□ -0.44
LRRC28-214ENST00000559433 IL22RA1Q8N6P7 574 aa12.31□□□□□ -0.44
LRRC28-214ENST00000559433 BMPERQ8N8U9 685 aa12.31□□□□□ -0.44
LRRC28-214ENST00000559433 PPHLN1Q8NEY8 458 aaKnown RBP12.31□□□□□ -0.44
LRRC28-214ENST00000559433 ZDHHC12Q96GR4 267 aa12.31□□□□□ -0.44
LRRC28-214ENST00000559433 RANBP9Q96S59 729 aa12.31□□□□□ -0.44
LRRC28-214ENST00000559433 INSM2Q96T92 566 aaPredicted RBP12.31□□□□□ -0.44
LRRC28-214ENST00000559433 ZPBPQ9BS86 351 aa12.31□□□□□ -0.44
LRRC28-214ENST00000559433 CCM2Q9BSQ5 444 aa12.31□□□□□ -0.44
LRRC28-214ENST00000559433 EIF2B3Q9NR50 452 aaKnown RBP12.31□□□□□ -0.44
LRRC28-214ENST00000559433 HOMER3Q9NSC5 361 aa12.31□□□□□ -0.44
LRRC28-214ENST00000559433 SMARCAL1Q9NZC9 954 aa12.31□□□□□ -0.44
LRRC28-214ENST00000559433 SLC2A6Q9UGQ3 507 aa12.31□□□□□ -0.44
LRRC28-214ENST00000559433 JRKLQ9Y4A0 524 aa12.31□□□□□ -0.44
LRRC28-214ENST00000559433 PCDHGA3Q9Y5H0 932 aa12.31□□□□□ -0.44
LRRC28-214ENST00000559433 B3GALT1Q9Y5Z6 326 aa12.31□□□□□ -0.44
LRRC28-214ENST00000559433 MGAQ8IWI9 3026 aa12.3□□□□□ -0.44
LRRC28-214ENST00000559433 ZSCAN12O43309 604 aa12.3□□□□□ -0.44
LRRC28-214ENST00000559433 ADRA1DP25100 572 aa12.3□□□□□ -0.44
LRRC28-214ENST00000559433 PSMA3P25788 255 aa12.3□□□□□ -0.44
LRRC28-214ENST00000559433 FOXN2P32314 431 aa12.3□□□□□ -0.44
LRRC28-214ENST00000559433 KCNJ1P48048 391 aa12.3□□□□□ -0.44
LRRC28-214ENST00000559433 SEPHS1P49903 392 aa12.3□□□□□ -0.44
LRRC28-214ENST00000559433 SESN2P58004 480 aaPredicted RBP12.3□□□□□ -0.44
LRRC28-214ENST00000559433 MC2RQ01718 297 aa12.3□□□□□ -0.44
LRRC28-214ENST00000559433 TSTD2Q5T7W7 516 aa12.3□□□□□ -0.44
LRRC28-214ENST00000559433 AFTPHQ6ULP2 937 aa12.3□□□□□ -0.44
LRRC28-214ENST00000559433 CEACAM20Q6UY09 585 aa12.3□□□□□ -0.44
LRRC28-214ENST00000559433 FAM92BQ6ZTR7 304 aa12.3□□□□□ -0.44
LRRC28-214ENST00000559433 NLRP9Q7RTR0 991 aa12.3□□□□□ -0.44
LRRC28-214ENST00000559433 VASH2Q86V25 355 aa12.3□□□□□ -0.44
LRRC28-214ENST00000559433 CLDN19Q8N6F1 224 aa12.3□□□□□ -0.44
LRRC28-214ENST00000559433 PRELID2Q8N945 189 aa12.3□□□□□ -0.44
LRRC28-214ENST00000559433 OR13J1Q8NGT2 312 aa12.3□□□□□ -0.44
LRRC28-214ENST00000559433 HDAC10Q969S8 669 aa12.3□□□□□ -0.44
LRRC28-214ENST00000559433 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.3□□□□□ -0.44
LRRC28-214ENST00000559433 RMDN2Q96LZ7 410 aa12.3□□□□□ -0.44
LRRC28-214ENST00000559433 TEFMQ96QE5 360 aaKnown RBP12.3□□□□□ -0.44
LRRC28-214ENST00000559433 CTRCQ99895 268 aa12.3□□□□□ -0.44
LRRC28-214ENST00000559433 ARHGAP9Q9BRR9 750 aa12.3□□□□□ -0.44
LRRC28-214ENST00000559433 COG4Q9H9E3 785 aa12.3□□□□□ -0.44
LRRC28-214ENST00000559433 TCAF1Q9Y4C2 921 aa12.3□□□□□ -0.44
LRRC28-214ENST00000559433 C17orf113A0A1B0GUU1 675 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.29□□□□□ -0.44
LRRC28-214ENST00000559433 POLR1CO15160 346 aaPredicted RBP12.29□□□□□ -0.44
LRRC28-214ENST00000559433 TOX3O15405 576 aaPredicted RBP12.29□□□□□ -0.44
LRRC28-214ENST00000559433 AP2A2O94973 939 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 GOT2P00505 430 aaKnown RBP12.29□□□□□ -0.44
LRRC28-214ENST00000559433 NSG1P42857 185 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 ARL4DP49703 201 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 PPP1CAP62136 330 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 PRAMEP78395 509 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 FOXM1Q08050 763 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 SRSF6Q13247 344 aaKnown RBP12.29□□□□□ -0.44
LRRC28-214ENST00000559433 COL9A2Q14055 689 aaPredicted RBP12.29□□□□□ -0.44
LRRC28-214ENST00000559433 ITIH4Q14624 930 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 CACHD1Q5VU97 1274 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 ARMC6Q6NXE6 501 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 PACS1Q6VY07 963 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 PRSS42Q7Z5A4 293 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 DTX1Q86Y01 620 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 REXO1L1PQ8IX06 675 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 OR6P1Q8NGX9 317 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 WBP1Q96G27 269 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 MS4A3Q96HJ5 214 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 MS4A14Q96JA4 679 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 PBKQ96KB5 322 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 BBC3Q96PG8 261 aaPredicted RBP12.29□□□□□ -0.44
LRRC28-214ENST00000559433 KCNF1Q9H3M0 494 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 ZNF768Q9H5H4 540 aaKnown RBP12.29□□□□□ -0.44
LRRC28-214ENST00000559433 KIR3DX1Q9H7L2 352 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 FBXO8Q9NRD0 319 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 RIMKLBQ9ULI2 386 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 HEBP2Q9Y5Z4 205 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 PRSS21Q9Y6M0 314 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 COLEC10Q9Y6Z7 277 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 KALRNO60229 2985 aa12.29□□□□□ -0.44
LRRC28-214ENST00000559433 QSOX1O00391 747 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 IFRD1O00458 451 aaPredicted RBP12.28□□□□□ -0.44
LRRC28-214ENST00000559433 EFSO43281 561 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 KIF1CO43896 1103 aaKnown RBP12.28□□□□□ -0.44
LRRC28-214ENST00000559433 FTH1P02794 183 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 GSTM1P09488 218 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 NDUFS1P28331 727 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 PREPP48147 710 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 VPS41P49754 854 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 TERF1P54274 439 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 CRADDP78560 199 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 GSTM4Q03013 218 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 ACVR1Q04771 509 aa12.28□□□□□ -0.44
LRRC28-214ENST00000559433 TRIP13Q15645 432 aaPredicted RBP12.28□□□□□ -0.44
LRRC28-214ENST00000559433 KCTD19Q17RG1 926 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms