RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 MYF5P13349 255 aa21.24■□□□□ 0.99
SNX1-206ENST00000559389 CKMT2P17540 419 aa21.24■□□□□ 0.99
SNX1-206ENST00000559389 RPL10P27635 214 aaKnown RBP21.24■□□□□ 0.99
SNX1-206ENST00000559389 ABCG1P45844 678 aa21.24■□□□□ 0.99
SNX1-206ENST00000559389 PREPP48147 710 aa21.24■□□□□ 0.99
SNX1-206ENST00000559389 DAB2P98082 770 aa21.24■□□□□ 0.99
SNX1-206ENST00000559389 NAB1Q13506 487 aa21.24■□□□□ 0.99
SNX1-206ENST00000559389 KIR2DS5Q14953 304 aa21.24■□□□□ 0.99
SNX1-206ENST00000559389 EFTUD2Q15029 972 aaKnown RBP eCLIP21.24■□□□□ 0.997e-14■■■■■ 31
SNX1-206ENST00000559389 SYTL3Q4VX76 610 aa21.24■□□□□ 0.99
SNX1-206ENST00000559389 CCNI2Q6ZMN8 369 aaPredicted RBP21.24■□□□□ 0.99
SNX1-206ENST00000559389 TRMT10CQ7L0Y3 403 aaKnown RBP21.24■□□□□ 0.99
SNX1-206ENST00000559389 STRA8Q7Z7C7 330 aa21.24■□□□□ 0.99
SNX1-206ENST00000559389 RMDN2Q96LZ7 410 aa21.24■□□□□ 0.99
SNX1-206ENST00000559389 MCMBPQ9BTE3 642 aa21.24■□□□□ 0.99
SNX1-206ENST00000559389 OR52A5Q9H2C5 316 aa21.24■□□□□ 0.99
SNX1-206ENST00000559389 SCHIP1Q9P0W5 487 aaPredicted RBP21.24■□□□□ 0.99
SNX1-206ENST00000559389 OR5K4A6NMS3 321 aa21.23■□□□□ 0.99
SNX1-206ENST00000559389 CEACAM1P13688 526 aa21.23■□□□□ 0.99
SNX1-206ENST00000559389 ACP1P24666 158 aa21.23■□□□□ 0.99
SNX1-206ENST00000559389 AOAHP28039 575 aa21.23■□□□□ 0.99
SNX1-206ENST00000559389 HALP42357 657 aa21.23■□□□□ 0.99
SNX1-206ENST00000559389 ACADVLP49748 655 aa21.23■□□□□ 0.99
SNX1-206ENST00000559389 NOVA1P51513 510 aaKnown RBP21.23■□□□□ 0.99
SNX1-206ENST00000559389 TMED2Q15363 201 aa21.23■□□□□ 0.99
SNX1-206ENST00000559389 RBM20Q5T481 1227 aaKnown RBP21.23■□□□□ 0.99
SNX1-206ENST00000559389 GUSBP11Q6P575 273 aa21.23■□□□□ 0.99
SNX1-206ENST00000559389 NAPRTQ6XQN6 538 aa21.23■□□□□ 0.99
SNX1-206ENST00000559389 ZC3HC1Q86WB0 502 aaKnown RBP21.23■□□□□ 0.99
SNX1-206ENST00000559389 MAPK15Q8TD08 544 aa21.23■□□□□ 0.99
SNX1-206ENST00000559389 NAT6Q93015 286 aa21.23■□□□□ 0.99
SNX1-206ENST00000559389 NDNQ99608 321 aa21.23■□□□□ 0.99
SNX1-206ENST00000559389 WWP1Q9H0M0 922 aa21.23■□□□□ 0.99
SNX1-206ENST00000559389 ACSS3Q9H6R3 686 aa21.23■□□□□ 0.99
SNX1-206ENST00000559389 RABGEF1Q9UJ41 708 aa21.23■□□□□ 0.99
SNX1-206ENST00000559389 PADI4Q9UM07 663 aa21.23■□□□□ 0.99
SNX1-206ENST00000559389 PSMD13Q9UNM6 376 aa21.23■□□□□ 0.99
SNX1-206ENST00000559389 CDYLQ9Y232 598 aa21.23■□□□□ 0.99
SNX1-206ENST00000559389 ARHGEF17Q96PE2 2063 aaPredicted RBP21.23■□□□□ 0.99
SNX1-206ENST00000559389 PTPRZ1P23471 2315 aaPredicted RBP21.23■□□□□ 0.99
SNX1-206ENST00000559389 EME2A4GXA9 379 aaPredicted RBP21.22■□□□□ 0.99
SNX1-206ENST00000559389 E5RI56 91 aa21.22■□□□□ 0.99
SNX1-206ENST00000559389 KPNA5O15131 536 aa21.22■□□□□ 0.99
SNX1-206ENST00000559389 GPC4O75487 556 aa21.22■□□□□ 0.99
SNX1-206ENST00000559389 APOA4P06727 396 aa21.22■□□□□ 0.99
SNX1-206ENST00000559389 ABHD2P08910 425 aa21.22■□□□□ 0.99
SNX1-206ENST00000559389 GP5P40197 560 aa21.22■□□□□ 0.99
SNX1-206ENST00000559389 FASLGP48023 281 aa21.22■□□□□ 0.99
SNX1-206ENST00000559389 DUSP3P51452 185 aaPredicted RBP21.22■□□□□ 0.99
SNX1-206ENST00000559389 PMS2P54278 862 aa21.22■□□□□ 0.99
SNX1-206ENST00000559389 UBE2IP63279 158 aaKnown RBP21.22■□□□□ 0.99
SNX1-206ENST00000559389 PLOD1Q02809 727 aaPredicted RBP21.22■□□□□ 0.99
SNX1-206ENST00000559389 DNAJC3Q13217 504 aa21.22■□□□□ 0.99
SNX1-206ENST00000559389 CLCA4Q14CN2 919 aa21.22■□□□□ 0.99
SNX1-206ENST00000559389 TRIP6Q15654 476 aaKnown RBP21.22■□□□□ 0.99
SNX1-206ENST00000559389 CTAGE3PQ8IX95 158 aa21.22■□□□□ 0.99
SNX1-206ENST00000559389 ARL14Q8N4G2 192 aa21.22■□□□□ 0.99
SNX1-206ENST00000559389 AVL9Q8NBF6 648 aa21.22■□□□□ 0.99
SNX1-206ENST00000559389 SPDYE1Q8NFV5 336 aaPredicted RBP21.22■□□□□ 0.99
SNX1-206ENST00000559389 GIMAP7Q8NHV1 300 aa21.22■□□□□ 0.99
SNX1-206ENST00000559389 TMEM159Q96B96 161 aa21.22■□□□□ 0.99
SNX1-206ENST00000559389 CPNE1Q99829 537 aa21.22■□□□□ 0.99
SNX1-206ENST00000559389 RHOJQ9H4E5 214 aa21.22■□□□□ 0.99
SNX1-206ENST00000559389 LATS2Q9NRM7 1088 aa21.22■□□□□ 0.99
SNX1-206ENST00000559389 POT1Q9NUX5 634 aa21.22■□□□□ 0.99
SNX1-206ENST00000559389 ZNF624Q9P2J8 865 aaPredicted RBP21.22■□□□□ 0.99
SNX1-206ENST00000559389 OR52A4PA6NMU1 304 aa21.21■□□□□ 0.99
SNX1-206ENST00000559389 GLB1P16278 677 aa21.21■□□□□ 0.99
SNX1-206ENST00000559389 CHRM3P20309 590 aa21.21■□□□□ 0.99
SNX1-206ENST00000559389 PDHA2P29803 388 aa21.21■□□□□ 0.99
SNX1-206ENST00000559389 CLCN7P51798 805 aa21.21■□□□□ 0.99
SNX1-206ENST00000559389 CSE1LP55060 971 aaKnown RBP21.21■□□□□ 0.99
SNX1-206ENST00000559389 ILF2Q12905 390 aaKnown RBP21.21■□□□□ 0.99
SNX1-206ENST00000559389 GBX1Q14549 363 aa21.21■□□□□ 0.99
SNX1-206ENST00000559389 BRD3Q15059 726 aa21.21■□□□□ 0.99
SNX1-206ENST00000559389 CAPRIN2Q6IMN6 1127 aaKnown RBP21.21■□□□□ 0.99
SNX1-206ENST00000559389 OTOAQ7RTW8 1153 aa21.21■□□□□ 0.99
SNX1-206ENST00000559389 ZNF438Q7Z4V0 828 aa21.21■□□□□ 0.99
SNX1-206ENST00000559389 PDZD3Q86UT5 571 aa21.21■□□□□ 0.99
SNX1-206ENST00000559389 SLC22A15Q8IZD6 547 aa21.21■□□□□ 0.99
SNX1-206ENST00000559389 PPM1NQ8N819 430 aa21.21■□□□□ 0.99
SNX1-206ENST00000559389 ASZ1Q8WWH4 475 aa21.21■□□□□ 0.99
SNX1-206ENST00000559389 FAM136AQ96C01 138 aa21.21■□□□□ 0.99
SNX1-206ENST00000559389 ATXN7L3BQ96GX2 97 aa21.21■□□□□ 0.99
SNX1-206ENST00000559389 CYTH2Q99418 400 aa21.21■□□□□ 0.99
SNX1-206ENST00000559389 RBBP8Q99708 897 aa21.21■□□□□ 0.99
SNX1-206ENST00000559389 SARS2Q9NP81 518 aaKnown RBP21.21■□□□□ 0.99
SNX1-206ENST00000559389 TOR4AQ9NXH8 423 aa21.21■□□□□ 0.99
SNX1-206ENST00000559389 TXNDC16Q9P2K2 825 aa21.21■□□□□ 0.99
SNX1-206ENST00000559389 KLHL42Q9P2K6 505 aa21.21■□□□□ 0.99
SNX1-206ENST00000559389 RNF215Q9Y6U7 377 aa21.21■□□□□ 0.99
SNX1-206ENST00000559389 SPAARA0A1B0GVQ0 90 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 GIPC1O14908 333 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 RIPK2O43353 540 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 NUDT21O43809 227 aaKnown RBP21.2■□□□□ 0.98
SNX1-206ENST00000559389 VPS26AO75436 327 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 SLCO2B1O94956 709 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 KCNK5O95279 499 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 MTHFD1P11586 935 aaKnown RBP21.2■□□□□ 0.98
SNX1-206ENST00000559389 XRCC1P18887 633 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms