RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 MVB12BQ9H7P6 319 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 CDH20Q9HBT6 801 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 CHST11Q9NPF2 352 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 ECHDC1Q9NTX5 307 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 ZBTB40Q9NUA8 1239 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 TMEM51Q9NW97 253 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 NLKQ9UBE8 527 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 FBXL2Q9UKC9 423 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 ADAM21Q9UKJ8 722 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 PLAGL1Q9UM63 463 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 MAGI3Q5TCQ9 1506 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 NPHP3Q7Z494 1330 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 ADGRB1O14514 1584 aa1.33□□□□□ -2.2
CTDSPL2-202ENST00000558373 CC2D2AQ9P2K1 1620 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 C2orf92A0A1B0GVN3 265 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 LILRA5A6NI73 299 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 CCDC69A6NI79 296 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 M0QZ24 198 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 ATP2A1O14983 1001 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 ZBTB43O43298 467 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 GPR137BO60478 399 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 RSL1D1O76021 490 aaKnown RBP1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 RAB40ALP0C0E4 278 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 OR2T7P0C7T2 308 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 DESP17661 470 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 TNFRSF8P28908 595 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 HNRNPH1P31943 449 aaKnown RBP1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 CCKBRP32239 447 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 IER3P46695 156 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 EVCP57679 992 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 PDE1BQ01064 536 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 SP2Q02086 613 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 TUBB2AQ13885 445 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 DAZAP2Q15038 168 aaPredicted RBP1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 PGM5Q15124 567 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 RABEP1Q15276 862 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 DUSP6Q16828 381 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 DUOXA1Q1HG43 343 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 SMTNL2Q2TAL5 461 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 ARL13AQ5H913 290 aaPredicted RBP1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 PRAMEF19Q5SWL8 479 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 CCNYL2Q5T2Q4 361 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 FAM91A1Q658Y4 838 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 CD164L2Q6UWJ8 174 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 ARHGEF25Q86VW2 580 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 TMEM173Q86WV6 379 aaPredicted RBP1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 CHSY1Q86X52 802 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 PRIMA1Q86XR5 153 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 KMT5CQ86Y97 462 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 DHX40Q8IX18 779 aaKnown RBP1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 RNF113BQ8IZP6 322 aaKnown RBP1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 HDDC3Q8N4P3 179 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 RASSF8Q8NHQ8 419 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 NCOA7Q8NI08 942 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 WASF1Q92558 559 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 NSMAFQ92636 917 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 IGSF8Q969P0 613 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 HMCESQ96FZ2 354 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 ZNF419Q96HQ0 510 aaPredicted RBP1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 AGAP2Q99490 1192 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 SPXQ9BT56 116 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 MSTO1Q9BUK6 570 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 EFHD1Q9BUP0 239 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 TUBB2BQ9BVA1 445 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 TM2D2Q9BX73 214 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 PRSS22Q9GZN4 317 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 SDCBP2Q9H190 292 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 PCDHB16Q9NRJ7 776 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 SLCO1C1Q9NYB5 712 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 ITGA11Q9UKX5 1188 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 CCPG1Q9ULG6 757 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 STON1Q9Y6Q2 735 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 ARHGEF40Q8TER5 1519 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 DYNC1H1Q14204 4646 aaKnown RBP1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 ZNF804BA4D1E1 1349 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 NCAPD3P42695 1498 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 GPRASP1Q5JY77 1395 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 FEZF1A0PJY2 475 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 NKX6-3A6NJ46 265 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 YDJCA8MPS7 323 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 KDM4EB2RXH2 506 aaPredicted RBP1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 SOCS2O14508 198 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 CPLX1O14810 134 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 HSPA12AO43301 675 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 SEC22BO75396 215 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 RHOBTB1O94844 696 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 SERPINF2P08697 491 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 RNF224P0DH78 156 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 EEF2P13639 858 aaKnown RBP1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 ACHEP22303 614 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 ACAT1P24752 427 aaKnown RBP1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 PTPN3P26045 913 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 KRTAP5-9P26371 169 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 ACADLP28330 430 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 ALDH4A1P30038 563 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 GNL1P36915 607 aaPredicted RBP1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 GARSP41250 739 aaKnown RBP1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 RPL21P46778 160 aaKnown RBP1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 NPBWR1P48145 328 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 KIAA1024LP59773 190 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms