RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 CCDC3Q9BQI4 270 aa25.03■■□□□ 1.6
SMAD6-202ENST00000557916 WWP1Q9H0M0 922 aa25.03■■□□□ 1.6
SMAD6-202ENST00000557916 TSPYL1Q9H0U9 437 aa25.03■■□□□ 1.6
SMAD6-202ENST00000557916 STN1Q9H668 368 aaKnown RBP25.03■■□□□ 1.6
SMAD6-202ENST00000557916 SARS2Q9NP81 518 aaKnown RBP25.03■■□□□ 1.6
SMAD6-202ENST00000557916 ZNF624Q9P2J8 865 aaPredicted RBP25.03■■□□□ 1.6
SMAD6-202ENST00000557916 CPNE7Q9UBL6 633 aa25.03■■□□□ 1.6
SMAD6-202ENST00000557916 RABGEF1Q9UJ41 708 aa25.03■■□□□ 1.6
SMAD6-202ENST00000557916 PIKFYVEQ9Y2I7 2098 aa25.02■■□□□ 1.6
SMAD6-202ENST00000557916 OR52A4PA6NMU1 304 aa25.02■■□□□ 1.6
SMAD6-202ENST00000557916 H3BMM5 538 aa25.02■■□□□ 1.6
SMAD6-202ENST00000557916 PPM1DO15297 605 aa25.02■■□□□ 1.6
SMAD6-202ENST00000557916 HAUS5O94927 633 aa25.02■■□□□ 1.6
SMAD6-202ENST00000557916 SLC35G4P0C7Q5 338 aa25.02■■□□□ 1.6
SMAD6-202ENST00000557916 PKMP14618 531 aaKnown RBP25.02■■□□□ 1.6
SMAD6-202ENST00000557916 PNLIPP16233 465 aa25.02■■□□□ 1.6
SMAD6-202ENST00000557916 CCR7P32248 378 aa25.02■■□□□ 1.6
SMAD6-202ENST00000557916 SLC19A1P41440 591 aa25.02■■□□□ 1.6
SMAD6-202ENST00000557916 PREPP48147 710 aa25.02■■□□□ 1.6
SMAD6-202ENST00000557916 E2F1Q01094 437 aa25.02■■□□□ 1.6
SMAD6-202ENST00000557916 HHEXQ03014 270 aa25.02■■□□□ 1.6
SMAD6-202ENST00000557916 RPA4Q13156 261 aa25.02■■□□□ 1.6
SMAD6-202ENST00000557916 BOP1Q14137 746 aaKnown RBP25.02■■□□□ 1.6
SMAD6-202ENST00000557916 BRD3Q15059 726 aa25.02■■□□□ 1.6
SMAD6-202ENST00000557916 NAPRTQ6XQN6 538 aa25.02■■□□□ 1.6
SMAD6-202ENST00000557916 KIAA0408Q6ZU52 694 aa25.02■■□□□ 1.6
SMAD6-202ENST00000557916 C3orf62Q6ZUJ4 267 aa25.02■■□□□ 1.6
SMAD6-202ENST00000557916 AVL9Q8NBF6 648 aa25.02■■□□□ 1.6
SMAD6-202ENST00000557916 ZFATQ9P243 1243 aa25.02■■□□□ 1.6
SMAD6-202ENST00000557916 SLC17A6Q9P2U8 582 aa25.02■■□□□ 1.6
SMAD6-202ENST00000557916 GSTA2P09210 222 aa25.01■■□□□ 1.59
SMAD6-202ENST00000557916 PDHA2P29803 388 aa25.01■■□□□ 1.59
SMAD6-202ENST00000557916 UBE2IP63279 158 aaKnown RBP25.01■■□□□ 1.59
SMAD6-202ENST00000557916 RPE65Q16518 533 aa25.01■■□□□ 1.59
SMAD6-202ENST00000557916 SYTL3Q4VX76 610 aa25.01■■□□□ 1.59
SMAD6-202ENST00000557916 CHCHD2P9Q5T1J5 151 aaPredicted RBP25.01■■□□□ 1.59
SMAD6-202ENST00000557916 DHRS13Q6UX07 377 aa25.01■■□□□ 1.59
SMAD6-202ENST00000557916 TRIM48Q8IWZ4 208 aa25.01■■□□□ 1.59
SMAD6-202ENST00000557916 Q8N9G6 341 aaPredicted RBP25.01■■□□□ 1.59
SMAD6-202ENST00000557916 SPDYE1Q8NFV5 336 aaPredicted RBP25.01■■□□□ 1.59
SMAD6-202ENST00000557916 CXorf40BQ96DE9 158 aa25.01■■□□□ 1.59
SMAD6-202ENST00000557916 INSM2Q96T92 566 aaPredicted RBP25.01■■□□□ 1.59
SMAD6-202ENST00000557916 ABCG4Q9H172 646 aa25.01■■□□□ 1.59
SMAD6-202ENST00000557916 OR52A5Q9H2C5 316 aa25.01■■□□□ 1.59
SMAD6-202ENST00000557916 CCDC68Q9H2F9 335 aa25.01■■□□□ 1.59
SMAD6-202ENST00000557916 NFU1Q9UMS0 254 aa25.01■■□□□ 1.59
SMAD6-202ENST00000557916 SLC5A10A0PJK1 596 aa25■■□□□ 1.59
SMAD6-202ENST00000557916 VIPP01282 170 aa25■■□□□ 1.59
SMAD6-202ENST00000557916 GPX6P59796 221 aa25■■□□□ 1.59
SMAD6-202ENST00000557916 PLOD1Q02809 727 aaPredicted RBP25■■□□□ 1.59
SMAD6-202ENST00000557916 CNSTQ6PJW8 725 aa25■■□□□ 1.59
SMAD6-202ENST00000557916 ZNF438Q7Z4V0 828 aa25■■□□□ 1.59
SMAD6-202ENST00000557916 ADAMTS14Q8WXS8 1223 aa25■■□□□ 1.59
SMAD6-202ENST00000557916 TMEM159Q96B96 161 aa25■■□□□ 1.59
SMAD6-202ENST00000557916 SH3KBP1Q96B97 665 aa25■■□□□ 1.59
SMAD6-202ENST00000557916 RMDN2Q96LZ7 410 aa25■■□□□ 1.59
SMAD6-202ENST00000557916 LRRC4CQ9HCJ2 640 aa25■■□□□ 1.59
SMAD6-202ENST00000557916 KPNA5O15131 536 aa24.99■■□□□ 1.59
SMAD6-202ENST00000557916 OPA1O60313 960 aa24.99■■□□□ 1.59
SMAD6-202ENST00000557916 NIPSNAP2O75323 286 aa24.99■■□□□ 1.59
SMAD6-202ENST00000557916 SLU7O95391 586 aaKnown RBP24.99■■□□□ 1.59
SMAD6-202ENST00000557916 AHSGP02765 367 aa24.99■■□□□ 1.59
SMAD6-202ENST00000557916 CHRM3P20309 590 aa24.99■■□□□ 1.59
SMAD6-202ENST00000557916 AOAHP28039 575 aa24.99■■□□□ 1.59
SMAD6-202ENST00000557916 GABRB3P28472 473 aa24.99■■□□□ 1.59
SMAD6-202ENST00000557916 CSE1LP55060 971 aaKnown RBP24.99■■□□□ 1.59
SMAD6-202ENST00000557916 CAPRIN2Q6IMN6 1127 aaKnown RBP24.99■■□□□ 1.59
SMAD6-202ENST00000557916 GALNT7Q86SF2 657 aa24.99■■□□□ 1.59
SMAD6-202ENST00000557916 ASZ1Q8WWH4 475 aa24.99■■□□□ 1.59
SMAD6-202ENST00000557916 C12orf66Q96MD2 445 aa24.99■■□□□ 1.59
SMAD6-202ENST00000557916 SLC38A3Q99624 504 aa24.99■■□□□ 1.59
SMAD6-202ENST00000557916 POT1Q9NUX5 634 aa24.99■■□□□ 1.59
SMAD6-202ENST00000557916 IMP3Q9NV31 184 aaKnown RBP24.99■■□□□ 1.59
SMAD6-202ENST00000557916 CFAP20Q9Y6A4 193 aaKnown RBP24.99■■□□□ 1.59
SMAD6-202ENST00000557916 SPTBN2O15020 2390 aa24.98■■□□□ 1.59
SMAD6-202ENST00000557916 TCRBV9S1A1TA0A576 114 aa24.98■■□□□ 1.59
SMAD6-202ENST00000557916 E5RI56 91 aa24.98■■□□□ 1.59
SMAD6-202ENST00000557916 IFRD1O00458 451 aaPredicted RBP24.98■■□□□ 1.59
SMAD6-202ENST00000557916 APOA4P06727 396 aa24.98■■□□□ 1.59
SMAD6-202ENST00000557916 ALDH4A1P30038 563 aa24.98■■□□□ 1.59
SMAD6-202ENST00000557916 HSPA14Q0VDF9 509 aa24.98■■□□□ 1.59
SMAD6-202ENST00000557916 NR1D2Q14995 579 aa24.98■■□□□ 1.59
SMAD6-202ENST00000557916 TMED2Q15363 201 aa24.98■■□□□ 1.59
SMAD6-202ENST00000557916 ZNF549Q6P9A3 640 aa24.98■■□□□ 1.59
SMAD6-202ENST00000557916 CYS1Q717R9 158 aa24.98■■□□□ 1.59
SMAD6-202ENST00000557916 SPRED1Q7Z699 444 aa24.98■■□□□ 1.59
SMAD6-202ENST00000557916 COMMD10Q9Y6G5 202 aa24.98■■□□□ 1.59
SMAD6-202ENST00000557916 ASXL3Q9C0F0 2248 aa24.98■■□□□ 1.59
SMAD6-202ENST00000557916 ZW10O43264 779 aa24.97■■□□□ 1.59
SMAD6-202ENST00000557916 MTHFD1P11586 935 aaKnown RBP24.97■■□□□ 1.59
SMAD6-202ENST00000557916 GPR3P46089 330 aa24.97■■□□□ 1.59
SMAD6-202ENST00000557916 CD151P48509 253 aa24.97■■□□□ 1.59
SMAD6-202ENST00000557916 OR1D5P58170 312 aa24.97■■□□□ 1.59
SMAD6-202ENST00000557916 OTOAQ7RTW8 1153 aa24.97■■□□□ 1.59
SMAD6-202ENST00000557916 ZNF761Q86XN6 746 aaPredicted RBP24.97■■□□□ 1.59
SMAD6-202ENST00000557916 RELL1Q8IUW5 271 aa24.97■■□□□ 1.59
SMAD6-202ENST00000557916 FAM136AQ96C01 138 aa24.97■■□□□ 1.59
SMAD6-202ENST00000557916 LDHAL6BQ9BYZ2 381 aaPredicted RBP24.97■■□□□ 1.59
SMAD6-202ENST00000557916 SLC40A1Q9NP59 571 aa24.97■■□□□ 1.59
SMAD6-202ENST00000557916 PRAMEF33A0A0G2JMD5 474 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms