RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 JMJD7P0C870 316 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 THRAP10827 490 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 HOXB3P14651 431 aaPredicted RBP12.21□□□□□ -0.45
SLIRP-209ENST00000557342 CSF2RBP32927 897 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 CD151P48509 253 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 GPR18Q14330 331 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 KRT33BQ14525 404 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 SEMA3AQ14563 771 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 MORF4L2Q15014 288 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 TBC1D25Q3MII6 688 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 ANKRD20A4Q4UJ75 823 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 DNAJC21Q5F1R6 531 aaKnown RBP12.21□□□□□ -0.45
SLIRP-209ENST00000557342 RNF187Q5TA31 235 aaPredicted RBP12.21□□□□□ -0.45
SLIRP-209ENST00000557342 KLHL35Q6PF15 583 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 FOXR1Q6PIV2 292 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 CES3Q6UWW8 571 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 ZNF574Q6ZN55 896 aaPredicted RBP12.21□□□□□ -0.45
SLIRP-209ENST00000557342 TMPRSS9Q7Z410 1059 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 ELMO1Q92556 727 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 ZNF669Q96BR6 464 aaPredicted RBP12.21□□□□□ -0.45
SLIRP-209ENST00000557342 CCDC74BQ96LY2 380 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 SLC46A1Q96NT5 459 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 TCF12Q99081 682 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 KRT12Q99456 494 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 CARD6Q9BX69 1037 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 THSD1Q9NS62 852 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.21□□□□□ -0.45
SLIRP-209ENST00000557342 PDP2Q9P2J9 529 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 GNPTGQ9UJJ9 305 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 VPS9D1Q9Y2B5 631 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 LOXL2Q9Y4K0 774 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 MAD1L1Q9Y6D9 718 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 RPS6KL1Q9Y6S9 549 aa12.21□□□□□ -0.45
SLIRP-209ENST00000557342 TTI1O43156 1089 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 OR1I1O60431 355 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 TUBB4AP04350 444 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 ITGA2BP08514 1039 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 OGNP20774 298 aaKnown RBP12.2□□□□□ -0.46
SLIRP-209ENST00000557342 RPS3P23396 243 aaKnown RBP eCLIP12.2□□□□□ -0.465e-12■■■■■ 28.9
SLIRP-209ENST00000557342 IVDP26440 423 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 ARNTP27540 789 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 CFHR1Q03591 330 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 THOC5Q13769 683 aaKnown RBP12.2□□□□□ -0.46
SLIRP-209ENST00000557342 PLCL1Q15111 1095 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 ZNF658BQ4V348 819 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-209ENST00000557342 SYTL3Q4VX76 610 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 XKR5Q6UX68 686 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 MAATS1Q7Z4T9 603 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 LDB1Q86U70 411 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-209ENST00000557342 TMEM135Q86UB9 458 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 LMNTD2Q8IXW0 634 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 LILRA3Q8N6C8 439 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-209ENST00000557342 BBOF1Q8ND07 529 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 AGBL5Q8NDL9 886 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 SPATA4Q8NEY3 305 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 GPR150Q8NGU9 434 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 SNIP1Q8TAD8 396 aaKnown RBP12.2□□□□□ -0.46
SLIRP-209ENST00000557342 GABPB2Q8TAK5 448 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-209ENST00000557342 FGF11Q92914 225 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 STAMBPL1Q96FJ0 436 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 SNF8Q96H20 258 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 PRR11Q96HE9 360 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-209ENST00000557342 SIGLEC10Q96LC7 697 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 RMDN2Q96LZ7 410 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 PANX3Q96QZ0 392 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 NAT9Q9BTE0 207 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 RAB33BQ9H082 229 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 OR52A5Q9H2C5 316 aa12.2□□□□□ -0.46
SLIRP-209ENST00000557342 MARCH4Q9P2E8 410 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-209ENST00000557342 CFAP20Q9Y6A4 193 aaKnown RBP12.2□□□□□ -0.46
SLIRP-209ENST00000557342 MN1Q10571 1320 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-209ENST00000557342 PRAMEF33A0A0G2JMD5 474 aa12.19□□□□□ -0.46
SLIRP-209ENST00000557342 A0A1W2PNU3 283 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-209ENST00000557342 UBA6A0AVT1 1052 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-209ENST00000557342 FAM187AA6NFU0 413 aa12.19□□□□□ -0.46
SLIRP-209ENST00000557342 EFCAB8A8MWE9 144 aa12.19□□□□□ -0.46
SLIRP-209ENST00000557342 TAF4O00268 1085 aa12.19□□□□□ -0.46
SLIRP-209ENST00000557342 KPNA5O15131 536 aa12.19□□□□□ -0.46
SLIRP-209ENST00000557342 TNFSF15O95150 251 aa12.19□□□□□ -0.46
SLIRP-209ENST00000557342 TTC4O95801 387 aa12.19□□□□□ -0.46
SLIRP-209ENST00000557342 TYRP1P17643 537 aa12.19□□□□□ -0.46
SLIRP-209ENST00000557342 PGAM1P18669 254 aa12.19□□□□□ -0.46
SLIRP-209ENST00000557342 CSTF2P33240 577 aaKnown RBP eCLIP12.19□□□□□ -0.46
SLIRP-209ENST00000557342 CAPZBP47756 277 aa12.19□□□□□ -0.46
SLIRP-209ENST00000557342 ARCN1P48444 511 aaKnown RBP12.19□□□□□ -0.46
SLIRP-209ENST00000557342 CKAP4Q07065 602 aaKnown RBP12.19□□□□□ -0.46
SLIRP-209ENST00000557342 BOP1Q14137 746 aaKnown RBP12.19□□□□□ -0.46
SLIRP-209ENST00000557342 C16orf72Q14CZ0 275 aa12.19□□□□□ -0.46
SLIRP-209ENST00000557342 TMED2Q15363 201 aa12.19□□□□□ -0.46
SLIRP-209ENST00000557342 LONRF1Q17RB8 773 aa12.19□□□□□ -0.46
SLIRP-209ENST00000557342 TYSND1Q2T9J0 566 aa12.19□□□□□ -0.46
SLIRP-209ENST00000557342 PTRHD1Q6GMV3 140 aaKnown RBP12.19□□□□□ -0.46
SLIRP-209ENST00000557342 NEPROQ6NW34 567 aa12.19□□□□□ -0.46
SLIRP-209ENST00000557342 PDZD3Q86UT5 571 aa12.19□□□□□ -0.46
SLIRP-209ENST00000557342 PDIK1LQ8N165 341 aa12.19□□□□□ -0.46
SLIRP-209ENST00000557342 ACVR1CQ8NER5 493 aa12.19□□□□□ -0.46
SLIRP-209ENST00000557342 SPDYE1Q8NFV5 336 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-209ENST00000557342 CALML6Q8TD86 181 aa12.19□□□□□ -0.46
SLIRP-209ENST00000557342 ASZ1Q8WWH4 475 aa12.19□□□□□ -0.46
SLIRP-209ENST00000557342 ZDHHC12Q96GR4 267 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms