RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 TDRD12Q587J7 1177 aaKnown RBP8.5□□□□□ -1.05
VRK1-206ENST00000557222 DOPEY1Q5JWR5 2465 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 CACHD1Q5VU97 1274 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 ZDHHC20Q5W0Z9 365 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 ALKBH5Q6P6C2 394 aaKnown RBP8.5□□□□□ -1.05
VRK1-206ENST00000557222 KLHL35Q6PF15 583 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 KMT5CQ86Y97 462 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 RASGRP3Q8IV61 690 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 CARFQ8N187 725 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 PQLC3Q8N755 202 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 CCNYQ8ND76 341 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 GPR26Q8NDV2 337 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 BRSK1Q8TDC3 778 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 UBXN4Q92575 508 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 TADA1Q96BN2 335 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 EID2BQ96D98 161 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 SLC41A2Q96JW4 573 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 TGM7Q96PF1 710 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 VPS35Q96QK1 796 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 TRIB3Q96RU7 358 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 SLC25A51Q9H1U9 297 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 LHX9Q9NQ69 397 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.5□□□□□ -1.05
VRK1-206ENST00000557222 DTLQ9NZJ0 730 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 UVRAGQ9P2Y5 699 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 SLC23A2Q9UGH3 650 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 SOX13Q9UN79 622 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 PLAAQ9Y263 795 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 TTLL3Q9Y4R7 772 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 PCDHGB7Q9Y5F8 929 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 PCDHGA9Q9Y5G4 932 aaKnown RBP8.5□□□□□ -1.05
VRK1-206ENST00000557222 SLC30A1Q9Y6M5 507 aa8.5□□□□□ -1.05
VRK1-206ENST00000557222 PIPSLA2A3N6 862 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 KLHL33A6NCF5 533 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 PDZK1P1A8MUH7 402 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 MTSS1O43312 755 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 ADAM11O75078 769 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 RASSF9O75901 435 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 PROSCO94903 275 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 CDK14O94921 469 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 EDN3P14138 238 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 BRAFP15056 766 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 ZFXP17010 805 aaPredicted RBP8.49□□□□□ -1.05
VRK1-206ENST00000557222 ZNF28P17035 718 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 TYRP1P17643 537 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 SSR1P43307 286 aaKnown RBP8.49□□□□□ -1.05
VRK1-206ENST00000557222 SERPINB4P48594 390 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 ZBED6P86452 979 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 ACY1Q03154 408 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 CDK18Q07002 472 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 DMPKQ09013 629 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 SLC10A2Q12908 348 aaPredicted RBP8.49□□□□□ -1.05
VRK1-206ENST00000557222 SEMA5AQ13591 1074 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 DNASE1L3Q13609 305 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 ERV3-1Q14264 604 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 PDK1Q15118 436 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 ANO6Q4KMQ2 910 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 ATP1A1-AS1Q5TC04 95 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 PAPD7Q5XG87 772 aaKnown RBP8.49□□□□□ -1.05
VRK1-206ENST00000557222 CCDC70Q6NSX1 233 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 NT5DC3Q86UY8 548 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 HPS6Q86YV9 775 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 LURAP1LQ8IV03 231 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 CNTD1Q8N815 330 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 OR8K5Q8NH50 307 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 ZFPM2Q8WW38 1151 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 CXorf40BQ96DE9 158 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 IMP4Q96G21 291 aaKnown RBP8.49□□□□□ -1.05
VRK1-206ENST00000557222 NAP1L5Q96NT1 182 aaPredicted RBP8.49□□□□□ -1.05
VRK1-206ENST00000557222 RNF157Q96PX1 679 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 CD180Q99467 661 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 TWSG1Q9GZX9 223 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 OSGEPL1Q9H4B0 414 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 TRABDQ9H4I3 376 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 LRRC4CQ9HCJ2 640 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 MLXIPLQ9NP71 852 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 TLK1Q9UKI8 766 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 RARRES3Q9UL19 164 aa8.49□□□□□ -1.05
VRK1-206ENST00000557222 MRPS18BQ9Y676 258 aaKnown RBP8.49□□□□□ -1.05
VRK1-206ENST00000557222 HIVEP3Q5T1R4 2406 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 A0A087X0T9 212 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 VPS4BO75351 444 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 KATNA1O75449 491 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 NDST3O95803 873 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 EPOP01588 193 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 H2AFZP0C0S5 128 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 FAM228BP0C875 321 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 BPIP17213 487 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 KDELR1P24390 212 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 PTPN4P29074 926 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 CASP14P31944 242 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 HMGCLP35914 325 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 HALP42357 657 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 LEPRP48357 1165 aaKnown RBP8.48□□□□□ -1.05
VRK1-206ENST00000557222 SEPHS1P49903 392 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 PDE1BQ01064 536 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 GBE1Q04446 702 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 TMEM115Q12893 351 aaPredicted RBP8.48□□□□□ -1.05
VRK1-206ENST00000557222 GTF2H3Q13889 308 aa8.48□□□□□ -1.05
VRK1-206ENST00000557222 GPR18Q14330 331 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms