RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 CLDN19Q8N6F1 224 aa20.13■□□□□ 0.81
FOXN3-209ENST00000555353 OR2L2Q8NH16 312 aa20.13■□□□□ 0.81
FOXN3-209ENST00000555353 LINC00615Q96LM1 132 aaPredicted RBP20.13■□□□□ 0.81
FOXN3-209ENST00000555353 WASH6PQ9NQA3 447 aa20.13■□□□□ 0.81
FOXN3-209ENST00000555353 FAM8A1Q9UBU6 413 aa20.13■□□□□ 0.81
FOXN3-209ENST00000555353 MSRB2Q9Y3D2 182 aa20.13■□□□□ 0.81
FOXN3-209ENST00000555353 ZCWPW2A0A1B0GU75 182 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 QSOX1O00391 747 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 MT-CO3P00414 261 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 RPLP0P05388 317 aaKnown RBP20.12■□□□□ 0.81
FOXN3-209ENST00000555353 ALDH4A1P30038 563 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 HALP42357 657 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 TTPAP49638 278 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 GPX6P59796 221 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 ZNF449Q6P9G9 518 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 ABRAXAS1Q6UWZ7 409 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 CYS1Q717R9 158 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 ZNF438Q7Z4V0 828 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 SPRED1Q7Z699 444 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 TRIM48Q8IWZ4 208 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 CDKL2Q92772 493 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 FCRL3Q96P31 734 aaPredicted RBP20.12■□□□□ 0.81
FOXN3-209ENST00000555353 DEPDC7Q96QD5 511 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 CCDC77Q9BR77 488 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 TRIM56Q9BRZ2 755 aaKnown RBP20.12■□□□□ 0.81
FOXN3-209ENST00000555353 SARS2Q9NP81 518 aaKnown RBP20.12■□□□□ 0.81
FOXN3-209ENST00000555353 PPANQ9NQ55 473 aaKnown RBP20.12■□□□□ 0.81
FOXN3-209ENST00000555353 C20orf96Q9NUD7 363 aaPredicted RBP20.12■□□□□ 0.81
FOXN3-209ENST00000555353 FAM221BA6H8Z2 402 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 F8W8V4 182 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 PPM1DO15297 605 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 TCEA3O75764 348 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 GPR3P46089 330 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 CCL7P80098 99 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 THOC5Q13769 683 aaKnown RBP20.12■□□□□ 0.81
FOXN3-209ENST00000555353 SLC29A2Q14542 456 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 AGAP9Q5VTM2 703 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 METRNLQ641Q3 311 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 RBM44Q6ZP01 1051 aaKnown RBP20.12■□□□□ 0.81
FOXN3-209ENST00000555353 FAM83HQ6ZRV2 1179 aaPredicted RBP20.12■□□□□ 0.81
FOXN3-209ENST00000555353 SH3KBP1Q96B97 665 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 CERS2Q96G23 380 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 GFM1Q96RP9 751 aaKnown RBP20.12■□□□□ 0.81
FOXN3-209ENST00000555353 SLC38A3Q99624 504 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 CCM2Q9BSQ5 444 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 LRRN3Q9H3W5 708 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 CPNE7Q9UBL6 633 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 CEP295Q9C0D2 2601 aa20.12■□□□□ 0.81
FOXN3-209ENST00000555353 TCRBV9S1A1TA0A576 114 aa20.11■□□□□ 0.81
FOXN3-209ENST00000555353 ARNTP27540 789 aa20.11■□□□□ 0.81
FOXN3-209ENST00000555353 MGAT5Q09328 741 aa20.11■□□□□ 0.81
FOXN3-209ENST00000555353 TARDBPQ13148 414 aaKnown RBP eCLIP20.11■□□□□ 0.81
FOXN3-209ENST00000555353 SEMA3AQ14563 771 aa20.11■□□□□ 0.81
FOXN3-209ENST00000555353 CDCP2Q5VXM1 449 aa20.11■□□□□ 0.81
FOXN3-209ENST00000555353 MRNIPQ6NTE8 343 aa20.11■□□□□ 0.81
FOXN3-209ENST00000555353 SDCCAG8Q86SQ7 713 aaPredicted RBP20.11■□□□□ 0.81
FOXN3-209ENST00000555353 LDB1Q86U70 411 aaPredicted RBP20.11■□□□□ 0.81
FOXN3-209ENST00000555353 MARCH9Q86YJ5 346 aa20.11■□□□□ 0.81
FOXN3-209ENST00000555353 LMNTD2Q8IXW0 634 aa20.11■□□□□ 0.81
FOXN3-209ENST00000555353 CFAP206Q8IYR0 622 aa20.11■□□□□ 0.81
FOXN3-209ENST00000555353 CACTIN-AS1Q8N1I8 211 aa20.11■□□□□ 0.81
FOXN3-209ENST00000555353 DCBLD1Q8N8Z6 715 aa20.11■□□□□ 0.81
FOXN3-209ENST00000555353 HM13Q8TCT9 377 aa20.11■□□□□ 0.81
FOXN3-209ENST00000555353 CALML6Q8TD86 181 aa20.11■□□□□ 0.81
FOXN3-209ENST00000555353 FBF1Q8TES7 1133 aa20.11■□□□□ 0.81
FOXN3-209ENST00000555353 ANKRD7Q92527 254 aa20.11■□□□□ 0.81
FOXN3-209ENST00000555353 SCHIP1Q9P0W5 487 aaPredicted RBP20.11■□□□□ 0.81
FOXN3-209ENST00000555353 MARCH4Q9P2E8 410 aaPredicted RBP20.11■□□□□ 0.81
FOXN3-209ENST00000555353 ACSL5Q9ULC5 683 aa20.11■□□□□ 0.81
FOXN3-209ENST00000555353 PSMD13Q9UNM6 376 aa20.11■□□□□ 0.81
FOXN3-209ENST00000555353 C17orf113A0A1B0GUU1 675 aa20.1■□□□□ 0.81
FOXN3-209ENST00000555353 NTN3O00634 580 aaPredicted RBP20.1■□□□□ 0.81
FOXN3-209ENST00000555353 OR1I1O60431 355 aa20.1■□□□□ 0.81
FOXN3-209ENST00000555353 VIPP01282 170 aa20.1■□□□□ 0.81
FOXN3-209ENST00000555353 FTH1P02794 183 aa20.1■□□□□ 0.81
FOXN3-209ENST00000555353 GSTM1P09488 218 aa20.1■□□□□ 0.81
FOXN3-209ENST00000555353 OR56A5P0C7T3 313 aa20.1■□□□□ 0.81
FOXN3-209ENST00000555353 BRAFP15056 766 aa20.1■□□□□ 0.81
FOXN3-209ENST00000555353 XRCC1P18887 633 aaPredicted RBP20.1■□□□□ 0.81
FOXN3-209ENST00000555353 PPM1FP49593 454 aaPredicted RBP20.1■□□□□ 0.81
FOXN3-209ENST00000555353 OR1D5P58170 312 aa20.1■□□□□ 0.81
FOXN3-209ENST00000555353 GSTM4Q03013 218 aa20.1■□□□□ 0.81
FOXN3-209ENST00000555353 NR1D2Q14995 579 aa20.1■□□□□ 0.81
FOXN3-209ENST00000555353 KLHL38Q2WGJ6 581 aa20.1■□□□□ 0.81
FOXN3-209ENST00000555353 KCNMB4Q86W47 210 aa20.1■□□□□ 0.81
FOXN3-209ENST00000555353 CXorf40BQ96DE9 158 aa20.1■□□□□ 0.81
FOXN3-209ENST00000555353 CYTH2Q99418 400 aa20.1■□□□□ 0.81
FOXN3-209ENST00000555353 FAM167BQ9BTA0 163 aa20.1■□□□□ 0.81
FOXN3-209ENST00000555353 FUT8Q9BYC5 575 aa20.1■□□□□ 0.81
FOXN3-209ENST00000555353 KCNK4Q9NYG8 393 aa20.1■□□□□ 0.81
FOXN3-209ENST00000555353 MOCS1Q9NZB8 636 aa20.1■□□□□ 0.81
FOXN3-209ENST00000555353 WDR37Q9Y2I8 494 aa20.1■□□□□ 0.81
FOXN3-209ENST00000555353 PRSS21Q9Y6M0 314 aa20.1■□□□□ 0.81
FOXN3-209ENST00000555353 A0A1W2PQM1 296 aa20.09■□□□□ 0.81
FOXN3-209ENST00000555353 OR52A4PA6NMU1 304 aa20.09■□□□□ 0.81
FOXN3-209ENST00000555353 GOLGA8KD6RF30 607 aa20.09■□□□□ 0.81
FOXN3-209ENST00000555353 GOLGA8TH3BQL2 631 aa20.09■□□□□ 0.81
FOXN3-209ENST00000555353 PFDN6O15212 129 aa20.09■□□□□ 0.81
FOXN3-209ENST00000555353 CASC3O15234 703 aaKnown RBP20.09■□□□□ 0.81
FOXN3-209ENST00000555353 CSO75390 466 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms