RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 MAD1L1Q9Y6D9 718 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 COLEC10Q9Y6Z7 277 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 KMT2BQ9UMN6 2715 aaPredicted RBP11.85□□□□□ -0.51
SRP54-206ENST00000555317 IGHV5-10-1A0A0J9YXX1 117 aa11.84□□□□□ -0.51
SRP54-206ENST00000555317 LIN7AO14910 233 aaPredicted RBP11.84□□□□□ -0.51
SRP54-206ENST00000555317 NDUFS3O75489 264 aa11.84□□□□□ -0.51
SRP54-206ENST00000555317 VAPBO95292 243 aa11.84□□□□□ -0.51
SRP54-206ENST00000555317 ITGA2BP08514 1039 aa11.84□□□□□ -0.51
SRP54-206ENST00000555317 TYRP1P17643 537 aa11.84□□□□□ -0.51
SRP54-206ENST00000555317 MPSTP25325 297 aa11.84□□□□□ -0.51
SRP54-206ENST00000555317 NDUFS1P28331 727 aa11.84□□□□□ -0.51
SRP54-206ENST00000555317 NMBRP28336 390 aa11.84□□□□□ -0.51
SRP54-206ENST00000555317 CSF2RBP32927 897 aa11.84□□□□□ -0.51
SRP54-206ENST00000555317 LIMK2P53671 638 aa11.84□□□□□ -0.51
SRP54-206ENST00000555317 PCBP4P57723 403 aaKnown RBP11.84□□□□□ -0.51
SRP54-206ENST00000555317 ERVPABLB-1P60509 514 aa11.84□□□□□ -0.51
SRP54-206ENST00000555317 ETF1P62495 437 aaKnown RBP11.84□□□□□ -0.51
SRP54-206ENST00000555317 PLOD1Q02809 727 aaPredicted RBP11.84□□□□□ -0.51
SRP54-206ENST00000555317 ZFP36L1Q07352 338 aaKnown RBP11.84□□□□□ -0.51
SRP54-206ENST00000555317 RPA4Q13156 261 aa11.84□□□□□ -0.51
SRP54-206ENST00000555317 SQSTM1Q13501 440 aa11.84□□□□□ -0.51
SRP54-206ENST00000555317 BOP1Q14137 746 aaKnown RBP11.84□□□□□ -0.51
SRP54-206ENST00000555317 TMED2Q15363 201 aa11.84□□□□□ -0.51
SRP54-206ENST00000555317 RNF187Q5TA31 235 aaPredicted RBP11.84□□□□□ -0.51
SRP54-206ENST00000555317 TMEM71Q6P5X7 295 aa11.84□□□□□ -0.51
SRP54-206ENST00000555317 SYT10Q6XYQ8 523 aa11.84□□□□□ -0.51
SRP54-206ENST00000555317 LRRC69Q6ZNQ3 347 aa11.84□□□□□ -0.51
SRP54-206ENST00000555317 CAND1Q86VP6 1230 aaKnown RBP11.84□□□□□ -0.51
SRP54-206ENST00000555317 HOOK3Q86VS8 718 aa11.84□□□□□ -0.51
SRP54-206ENST00000555317 AGBL5Q8NDL9 886 aa11.84□□□□□ -0.51
SRP54-206ENST00000555317 RCBTB1Q8NDN9 531 aa11.84□□□□□ -0.51
SRP54-206ENST00000555317 GSDMBQ8TAX9 411 aa11.84□□□□□ -0.51
SRP54-206ENST00000555317 FGF11Q92914 225 aa11.84□□□□□ -0.51
SRP54-206ENST00000555317 ZNF669Q96BR6 464 aaPredicted RBP11.84□□□□□ -0.51
SRP54-206ENST00000555317 SGSM3Q96HU1 749 aa11.84□□□□□ -0.51
SRP54-206ENST00000555317 KLHL3Q9UH77 587 aa11.84□□□□□ -0.51
SRP54-206ENST00000555317 GNPTGQ9UJJ9 305 aa11.84□□□□□ -0.51
SRP54-206ENST00000555317 CFAP20Q9Y6A4 193 aaKnown RBP11.84□□□□□ -0.51
SRP54-206ENST00000555317 SRRM3A6NNA2 597 aaPredicted RBP11.83□□□□□ -0.52
SRP54-206ENST00000555317 DNALI1O14645 258 aaPredicted RBP11.83□□□□□ -0.52
SRP54-206ENST00000555317 PRMT5O14744 637 aaPredicted RBP11.83□□□□□ -0.52
SRP54-206ENST00000555317 NDC80O14777 642 aa11.83□□□□□ -0.52
SRP54-206ENST00000555317 SGTAO43765 313 aa11.83□□□□□ -0.52
SRP54-206ENST00000555317 OR1I1O60431 355 aa11.83□□□□□ -0.52
SRP54-206ENST00000555317 DXOO77932 396 aaKnown RBP11.83□□□□□ -0.52
SRP54-206ENST00000555317 THRAP10827 490 aa11.83□□□□□ -0.52
SRP54-206ENST00000555317 HGFP14210 728 aa11.83□□□□□ -0.52
SRP54-206ENST00000555317 HOXB3P14651 431 aaPredicted RBP11.83□□□□□ -0.52
SRP54-206ENST00000555317 CAPZBP47756 277 aa11.83□□□□□ -0.52
SRP54-206ENST00000555317 PREPP48147 710 aa11.83□□□□□ -0.52
SRP54-206ENST00000555317 MAPK10P53779 464 aa11.83□□□□□ -0.52
SRP54-206ENST00000555317 THOC5Q13769 683 aaKnown RBP11.83□□□□□ -0.52
SRP54-206ENST00000555317 DHX34Q14147 1143 aaKnown RBP11.83□□□□□ -0.52
SRP54-206ENST00000555317 RNASEH2BQ5TBB1 312 aaKnown RBP11.83□□□□□ -0.52
SRP54-206ENST00000555317 TMEM164Q5U3C3 297 aa11.83□□□□□ -0.52
SRP54-206ENST00000555317 IZUMO3Q5VZ72 239 aa11.83□□□□□ -0.52
SRP54-206ENST00000555317 PTRHD1Q6GMV3 140 aaKnown RBP11.83□□□□□ -0.52
SRP54-206ENST00000555317 KIAA0930Q6ICG6 404 aaPredicted RBP11.83□□□□□ -0.52
SRP54-206ENST00000555317 ARMC6Q6NXE6 501 aa11.83□□□□□ -0.52
SRP54-206ENST00000555317 IGF2-ASQ6U949 168 aa11.83□□□□□ -0.52
SRP54-206ENST00000555317 CES3Q6UWW8 571 aa11.83□□□□□ -0.52
SRP54-206ENST00000555317 MICALCLQ6ZW33 695 aa11.83□□□□□ -0.52
SRP54-206ENST00000555317 TMPRSS9Q7Z410 1059 aa11.83□□□□□ -0.52
SRP54-206ENST00000555317 FAM129CQ86XR2 697 aa11.83□□□□□ -0.52
SRP54-206ENST00000555317 GPR150Q8NGU9 434 aa11.83□□□□□ -0.52
SRP54-206ENST00000555317 GABPB2Q8TAK5 448 aaPredicted RBP11.83□□□□□ -0.52
SRP54-206ENST00000555317 TRIM44Q96DX7 344 aaPredicted RBP11.83□□□□□ -0.52
SRP54-206ENST00000555317 MFSD3Q96ES6 412 aa11.83□□□□□ -0.52
SRP54-206ENST00000555317 ZDHHC12Q96GR4 267 aa11.83□□□□□ -0.52
SRP54-206ENST00000555317 RMDN2Q96LZ7 410 aa11.83□□□□□ -0.52
SRP54-206ENST00000555317 SLC46A1Q96NT5 459 aa11.83□□□□□ -0.52
SRP54-206ENST00000555317 WDR70Q9NW82 654 aa11.83□□□□□ -0.52
SRP54-206ENST00000555317 VPS9D1Q9Y2B5 631 aa11.83□□□□□ -0.52
SRP54-206ENST00000555317 RPS6KL1Q9Y6S9 549 aa11.83□□□□□ -0.52
SRP54-206ENST00000555317 LAMA5O15230 3695 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 FAM237BA0A1B0GVD1 139 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 UBA6A0AVT1 1052 aaPredicted RBP11.82□□□□□ -0.52
SRP54-206ENST00000555317 A8MU76 341 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 SMAPO00193 183 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 RASSF9O75901 435 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 CAPNS1P04632 268 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 APOA4P06727 396 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 ITGB6P18564 788 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 CD151P48509 253 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 EIF3BP55884 814 aaKnown RBP11.82□□□□□ -0.52
SRP54-206ENST00000555317 C16orf72Q14CZ0 275 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 MORF4L2Q15014 288 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 BRD3Q15059 726 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 IRGCQ6NXR0 463 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 DUS1LQ6P1R4 473 aaKnown RBP11.82□□□□□ -0.52
SRP54-206ENST00000555317 ZNF574Q6ZN55 896 aaPredicted RBP11.82□□□□□ -0.52
SRP54-206ENST00000555317 LDB1Q86U70 411 aaPredicted RBP11.82□□□□□ -0.52
SRP54-206ENST00000555317 PDZD3Q86UT5 571 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 LRRC6Q86X45 466 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 LILRA3Q8N6C8 439 aaPredicted RBP11.82□□□□□ -0.52
SRP54-206ENST00000555317 NAT8LQ8N9F0 302 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 ZNF248Q8NDW4 579 aa11.82□□□□□ -0.52
SRP54-206ENST00000555317 SPDYE1Q8NFV5 336 aaPredicted RBP11.82□□□□□ -0.52
SRP54-206ENST00000555317 SNIP1Q8TAD8 396 aaKnown RBP11.82□□□□□ -0.52
SRP54-206ENST00000555317 ZFPM2Q8WW38 1151 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms