RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 ACAP2Q15057 778 aa11□□□□□ -0.65
SRP54-205ENST00000554803 TLR1Q15399 786 aa11□□□□□ -0.65
SRP54-205ENST00000554803 WDR45BQ5MNZ6 344 aa11□□□□□ -0.65
SRP54-205ENST00000554803 C10orf120Q5SQS8 335 aa11□□□□□ -0.65
SRP54-205ENST00000554803 VWA5B1Q5TIE3 1220 aa11□□□□□ -0.65
SRP54-205ENST00000554803 FKBP9P1Q75LS8 142 aa11□□□□□ -0.65
SRP54-205ENST00000554803 EFL1Q7Z2Z2 1120 aaKnown RBP11□□□□□ -0.65
SRP54-205ENST00000554803 CENPLQ8N0S6 344 aaPredicted RBP11□□□□□ -0.65
SRP54-205ENST00000554803 PDZD8Q8NEN9 1154 aa11□□□□□ -0.65
SRP54-205ENST00000554803 BHLHE22Q8NFJ8 381 aaPredicted RBP11□□□□□ -0.65
SRP54-205ENST00000554803 MAPK15Q8TD08 544 aa11□□□□□ -0.65
SRP54-205ENST00000554803 RHBDD1Q8TEB9 315 aa11□□□□□ -0.65
SRP54-205ENST00000554803 FOXJ1Q92949 421 aa11□□□□□ -0.65
SRP54-205ENST00000554803 RCN3Q96D15 328 aa11□□□□□ -0.65
SRP54-205ENST00000554803 MFSD3Q96ES6 412 aa11□□□□□ -0.65
SRP54-205ENST00000554803 WBP1Q96G27 269 aa11□□□□□ -0.65
SRP54-205ENST00000554803 AGAP2Q99490 1192 aa11□□□□□ -0.65
SRP54-205ENST00000554803 HOPXQ9BPY8 73 aaPredicted RBP11□□□□□ -0.65
SRP54-205ENST00000554803 RETREG1Q9H6L5 497 aa11□□□□□ -0.65
SRP54-205ENST00000554803 GAREM1Q9H706 876 aa11□□□□□ -0.65
SRP54-205ENST00000554803 IL21RQ9HBE5 538 aa11□□□□□ -0.65
SRP54-205ENST00000554803 GLOD4Q9HC38 313 aa11□□□□□ -0.65
SRP54-205ENST00000554803 PNPLA3Q9NST1 481 aa11□□□□□ -0.65
SRP54-205ENST00000554803 ARMC1Q9NVT9 282 aa11□□□□□ -0.65
SRP54-205ENST00000554803 ARHGEF38Q9NXL2 777 aa11□□□□□ -0.65
SRP54-205ENST00000554803 OR12D3Q9UGF7 316 aa11□□□□□ -0.65
SRP54-205ENST00000554803 CYP8B1Q9UNU6 501 aa11□□□□□ -0.65
SRP54-205ENST00000554803 AP4S1Q9Y587 144 aa11□□□□□ -0.65
SRP54-205ENST00000554803 NUMA1Q14980 2115 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 TCRBV3S1A0A5B6 114 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 TCAF2A6NFQ2 919 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 AQP12BA6NM10 295 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 SLC7A4O43246 635 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 COCHO43405 550 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 DLX3O60479 287 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 IPO13O94829 963 aaKnown RBP10.99□□□□□ -0.65
SRP54-205ENST00000554803 NTRK1P04629 796 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 TFAP2AP05549 437 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 HMBSP08397 361 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 LTA4HP09960 611 aaKnown RBP10.99□□□□□ -0.65
SRP54-205ENST00000554803 SLC2A3P11169 496 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 ZNF23P17027 643 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 GRIA2P42262 883 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 PTPRNQ16849 979 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 KCTD21Q4G0X4 260 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 HECTD3Q5T447 861 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 CERCAMQ5T4B2 595 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 NXNQ6DKJ4 435 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 TRMT11Q7Z4G4 463 aaKnown RBP10.99□□□□□ -0.65
SRP54-205ENST00000554803 C12orf40Q86WS4 652 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 TMPRSS12Q86WS5 348 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 MIB1Q86YT6 1006 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 AQP12AQ8IXF9 295 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 ARL14EPQ8N8R7 260 aaPredicted RBP10.99□□□□□ -0.65
SRP54-205ENST00000554803 ANKFN1Q8N957 763 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 TMEM102Q8N9M5 508 aaPredicted RBP10.99□□□□□ -0.65
SRP54-205ENST00000554803 SNIP1Q8TAD8 396 aaKnown RBP10.99□□□□□ -0.65
SRP54-205ENST00000554803 FAM81AQ8TBF8 368 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 MIPOL1Q8TD10 442 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 DNASE2BQ8WZ79 361 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 L3HYPDHQ96EM0 354 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 FCRL2Q96LA5 508 aaPredicted RBP10.99□□□□□ -0.65
SRP54-205ENST00000554803 BIRC8Q96P09 236 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 CATSPER2Q96P56 530 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 GPR78Q96P69 363 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 CCT7Q99832 543 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 YTHDF1Q9BYJ9 559 aaKnown RBP10.99□□□□□ -0.65
SRP54-205ENST00000554803 NUF2Q9BZD4 464 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 RNF38Q9H0F5 515 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 RBM38Q9H0Z9 239 aaKnown RBP10.99□□□□□ -0.65
SRP54-205ENST00000554803 CHRAC1Q9NRG0 131 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 TREX1Q9NSU2 369 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 XPR1Q9UBH6 696 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 FNDC3AQ9Y2H6 1198 aaKnown RBP10.99□□□□□ -0.65
SRP54-205ENST00000554803 NDUFAF1Q9Y375 327 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 MFHAS1Q9Y4C4 1052 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 SNX10Q9Y5X0 201 aa10.99□□□□□ -0.65
SRP54-205ENST00000554803 COPG1Q9Y678 874 aaKnown RBP10.99□□□□□ -0.65
SRP54-205ENST00000554803 SLC12A8A0AV02 714 aa10.98□□□□□ -0.65
SRP54-205ENST00000554803 PSMD12O00232 456 aaPredicted RBP10.98□□□□□ -0.65
SRP54-205ENST00000554803 SDHDO14521 159 aa10.98□□□□□ -0.65
SRP54-205ENST00000554803 UBDO15205 165 aa10.98□□□□□ -0.65
SRP54-205ENST00000554803 HNRNPRO43390 633 aaKnown RBP10.98□□□□□ -0.65
SRP54-205ENST00000554803 TNFSF14O43557 240 aa10.98□□□□□ -0.65
SRP54-205ENST00000554803 GPC4O75487 556 aa10.98□□□□□ -0.65
SRP54-205ENST00000554803 SRP72O76094 671 aaKnown RBP10.98□□□□□ -0.65
SRP54-205ENST00000554803 JCHAINP01591 159 aa10.98□□□□□ -0.65
SRP54-205ENST00000554803 AHSGP02765 367 aa10.98□□□□□ -0.65
SRP54-205ENST00000554803 ASLP04424 464 aa10.98□□□□□ -0.65
SRP54-205ENST00000554803 SNRPB2P08579 225 aaKnown RBP10.98□□□□□ -0.65
SRP54-205ENST00000554803 SBK3P0C264 359 aa10.98□□□□□ -0.65
SRP54-205ENST00000554803 CCDC166P0CW27 439 aa10.98□□□□□ -0.65
SRP54-205ENST00000554803 BMP2P12643 396 aa10.98□□□□□ -0.65
SRP54-205ENST00000554803 ENO3P13929 434 aaPredicted RBP10.98□□□□□ -0.65
SRP54-205ENST00000554803 HOXB2P14652 356 aa10.98□□□□□ -0.65
SRP54-205ENST00000554803 XRCC1P18887 633 aaPredicted RBP10.98□□□□□ -0.65
SRP54-205ENST00000554803 MAOBP27338 520 aa10.98□□□□□ -0.65
SRP54-205ENST00000554803 NMBRP28336 390 aa10.98□□□□□ -0.65
SRP54-205ENST00000554803 EPHA3P29320 983 aa10.98□□□□□ -0.65
SRP54-205ENST00000554803 ADRA1AP35348 466 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms