RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 BRWD1Q9NSI6 2320 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 ZNF609O15014 1411 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 NCAPD2Q15021 1401 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 SNED1Q8TER0 1413 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 GBF1Q92538 1859 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 RTL9Q8NET4 1388 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 SIPA1L3O60292 1781 aaPredicted RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 ABCC4O15439 1325 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 UBN2Q6ZU65 1347 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 DDX60Q8IY21 1712 aaKnown RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 hDV102S1A0JD36 115 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 CLRN2A0PK11 232 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 CYSRT1A8MQ03 144 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 B4DLN1 442 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 PRSS44E7EML9 344 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 H3BQ06 376 aaPredicted RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 ATP2A1O14983 1001 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 ECE2O60344 883 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 TMCC2O75069 709 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 GPC4O75487 556 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 BEST1O76090 585 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 TPPPO94811 219 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 GLUD1P00367 558 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 EGFP01133 1207 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 HSP90AB1P08238 724 aaKnown RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 ACAA1P09110 424 aaPredicted RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 ACTN1P12814 892 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 FOSL2P15408 326 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 ANXA7P20073 488 aaKnown RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 UBA1P22314 1058 aaKnown RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 HMGB2P26583 209 aaKnown RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 ALDH1B1P30837 517 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 RAD52P43351 418 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 GLUD2P49448 558 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 PCYT1AP49585 367 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 PDLIM4P50479 330 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 MRPL12P52815 198 aaKnown RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 MFAP4P55083 255 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 CSNK2A1P68400 391 aaPredicted RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 MRPS34P82930 218 aaKnown RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 SP3Q02447 781 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 CRYZQ08257 329 aaKnown RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 TEFQ10587 303 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 SREBF2Q12772 1141 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 STK4Q13043 487 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 PNLIPRP3Q17RR3 467 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 AMZ1Q400G9 498 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 EFHC1Q5JVL4 640 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 ZNF324BQ6AW86 544 aaPredicted RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 DUS1LQ6P1R4 473 aaKnown RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 C8orf82Q6P1X6 216 aaPredicted RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 SLC36A4Q6YBV0 504 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 CFAP77Q6ZQR2 320 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 CLEC17AQ6ZS10 378 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 C18orf65Q6ZTR6 163 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 ENOSF1Q7L5Y1 443 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 RBM23Q86U06 439 aaKnown RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 FJX1Q86VR8 437 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 FOXRED2Q8IWF2 684 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 HJURPQ8NCD3 748 aaPredicted RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 CSNK2A3Q8NEV1 391 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 OR8K5Q8NH50 307 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 RND1Q92730 232 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 MOAP1Q96BY2 351 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 WBP1Q96G27 269 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 CCDC34Q96HJ3 373 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 DEFB118Q96PH6 123 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 GAD1Q99259 594 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 NTPCRQ9BSD7 190 aaKnown RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 THUMPD2Q9BTF0 503 aaKnown RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 C1QTNF1Q9BXJ1 281 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 C17orf75Q9HAS0 396 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 MMP25Q9NPA2 562 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 MIS18AQ9NYP9 233 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 COPG2Q9UBF2 871 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 UBA2Q9UBT2 640 aaPredicted RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 POLKQ9UBT6 870 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 SLC9A2Q9UBY0 812 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 OR14J1Q9UGF5 321 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 FBXW11Q9UKB1 542 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 CMAHPQ9Y471 501 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 TTLL3Q9Y4R7 772 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 CLIC4Q9Y696 253 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 TPRP12270 2363 aaKnown RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 PTPRZ1P23471 2315 aaPredicted RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 BPTFQ12830 3046 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 BAHCC1Q9P281 2608 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 TONSLQ96HA7 1378 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 HEG1Q9ULI3 1381 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 WDR81Q562E7 1941 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 IGLV5-52A0A0A0MRZ9 124 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 A0A0U1RQJ8 604 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 KANSL1LA0AUZ9 987 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 CPED1A4D0V7 1026 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 LINC01553A4QN01 128 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 CLEC18AA5D8T8 446 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 KRTAP9-6A8MVA2 160 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 M0QZ24 198 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 CTDSP2O14595 271 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 OGG1O15527 345 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms