RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 KXD1Q9BQD3 176 aa4.99□□□□□ -1.61
ATXN3-218ENST00000553309 WDR6Q9NNW5 1121 aaKnown RBP4.99□□□□□ -1.61
ATXN3-218ENST00000553309 IL36RNQ9UBH0 155 aa4.99□□□□□ -1.61
ATXN3-218ENST00000553309 PADI3Q9ULW8 664 aa4.99□□□□□ -1.61
ATXN3-218ENST00000553309 DERAQ9Y315 318 aa4.99□□□□□ -1.61
ATXN3-218ENST00000553309 LOXHD1Q8IVV2 1947 aa4.99□□□□□ -1.61
ATXN3-218ENST00000553309 MYH15Q9Y2K3 1946 aa4.99□□□□□ -1.61
ATXN3-218ENST00000553309 OR6C68A6NDL8 312 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 B4DLN1 442 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 PRSS44E7EML9 344 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 ACOT8O14734 319 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 NCAM2O15394 837 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 ASAP2O43150 1006 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 RFPL2O75678 378 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 CEACAM1P13688 526 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 UBA1P22314 1058 aaKnown RBP4.98□□□□□ -1.61
ATXN3-218ENST00000553309 GNLYP22749 145 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 USP8P40818 1118 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 RPS9P46781 194 aaKnown RBP4.98□□□□□ -1.61
ATXN3-218ENST00000553309 MTNR1AP48039 350 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 MRPL12P52815 198 aaKnown RBP4.98□□□□□ -1.61
ATXN3-218ENST00000553309 NUCB2P80303 420 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 MRPS6P82932 125 aaKnown RBP4.98□□□□□ -1.61
ATXN3-218ENST00000553309 SP4Q02446 784 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 KEAP1Q14145 624 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 IL13RA2Q14627 380 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 STXBP2Q15833 593 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 USH1GQ495M9 461 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 CCDC92Q53HC0 331 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-218ENST00000553309 TDRD12Q587J7 1177 aaKnown RBP4.98□□□□□ -1.61
ATXN3-218ENST00000553309 CBWD5Q5RIA9 395 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 CELF3Q5SZQ8 465 aaKnown RBP4.98□□□□□ -1.61
ATXN3-218ENST00000553309 CAPRIN2Q6IMN6 1127 aaKnown RBP4.98□□□□□ -1.61
ATXN3-218ENST00000553309 MMS22LQ6ZRQ5 1243 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 KBTBD6Q86V97 674 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 LCA5Q86VQ0 697 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 KRT222Q8N1A0 295 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 SLC39A11Q8N1S5 342 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 TEX45Q8NA69 505 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 STAMQ92783 540 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 BICD1Q96G01 975 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 RPS6KC1Q96S38 1066 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 FTHL17Q9BXU8 183 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 CTDSP1Q9GZU7 261 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 ZBP1Q9H171 429 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 CDT1Q9H211 546 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 HEBP1Q9NRV9 189 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 ATP8A2Q9NTI2 1148 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 SPATS2LQ9NUQ6 558 aaKnown RBP4.98□□□□□ -1.61
ATXN3-218ENST00000553309 C2orf42Q9NWW7 574 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 GRHL1Q9NZI5 618 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 NLKQ9UBE8 527 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 PTPRQQ9UMZ3 2332 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 C2CD3Q4AC94 2353 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 ITPR3Q14573 2671 aa4.98□□□□□ -1.61
ATXN3-218ENST00000553309 PTPRCP08575 1304 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 CCDC171Q6TFL3 1326 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 UBR5O95071 2799 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-218ENST00000553309 SHROOM3Q8TF72 1996 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 DENND3A2RUS2 1198 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 CLEC18AA5D8T8 446 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 TRIM64CA6NLI5 447 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 PRR23D1E9PI22 279 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-218ENST00000553309 STX16-NPEPL1H3BU86 382 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 STX16O14662 325 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 ERLIN1O75477 346 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 SMC2O95347 1197 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 IL1AP01583 271 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 PRR23D2P0DMB1 279 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-218ENST00000553309 FGF3P11487 239 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-218ENST00000553309 NAGAP17050 411 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 RXRAP19793 462 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 CSRP1P21291 193 aaKnown RBP4.97□□□□□ -1.61
ATXN3-218ENST00000553309 GJC1P36383 396 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 CXCL12P48061 93 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 TRAPPC10P48553 1259 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 CCR3P51677 355 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 ACTR2P61160 394 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 GOLGA8FQ08AF8 430 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 PRPF4BQ13523 1007 aaKnown RBP4.97□□□□□ -1.61
ATXN3-218ENST00000553309 HNF4GQ14541 408 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 SH2D4BQ5SQS7 431 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 ATG9BQ674R7 924 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 NADSYN1Q6IA69 706 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 C15orf39Q6ZRI6 1047 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 FAM83HQ6ZRV2 1179 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-218ENST00000553309 CCDC80Q76M96 950 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 MON1BQ7L1V2 547 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 CCDC186Q7Z3E2 898 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 LONP2Q86WA8 852 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 TMC8Q8IU68 726 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 DCP1BQ8IZD4 617 aaKnown RBP4.97□□□□□ -1.61
ATXN3-218ENST00000553309 LRRC43Q8N309 656 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 TMEM57Q8N5G2 664 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 RBMXL3Q8N7X1 1067 aaKnown RBP4.97□□□□□ -1.61
ATXN3-218ENST00000553309 CLEC18CQ8NCF0 446 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 SETD9Q8NE22 299 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 GIMAP1Q8WWP7 306 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 TCP11Q8WWU5 503 aa4.97□□□□□ -1.61
ATXN3-218ENST00000553309 RILPL2Q969X0 211 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms