RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 OR4D1Q15615 310 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 ZNF461Q8TAF7 563 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 SH3RF2Q8TEC5 729 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 ATL1Q8WXF7 558 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 AURKBQ96GD4 344 aaPredicted RBP15.43■□□□□ 0.06
CUX1-211ENST00000546411 BBS4Q96RK4 519 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 CXorf21Q9HAI6 301 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 AMBNQ9NP70 447 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 H2AFY2Q9P0M6 372 aaPredicted RBP15.43■□□□□ 0.06
CUX1-211ENST00000546411 VPS51Q9UID3 782 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 F5P12259 2224 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 LOC730098B7Z3J9 87 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 KPNA5O15131 536 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 IFNA14P01570 189 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 GPIP06744 558 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 THRBP10828 461 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 TMED10P49755 219 aaKnown RBP15.43■□□□□ 0.06
CUX1-211ENST00000546411 ST13P50502 369 aaKnown RBP15.43■□□□□ 0.06
CUX1-211ENST00000546411 SGCGQ13326 291 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 COL9A2Q14055 689 aaPredicted RBP15.43■□□□□ 0.06
CUX1-211ENST00000546411 PATL1Q86TB9 770 aaKnown RBP15.43■□□□□ 0.06
CUX1-211ENST00000546411 OR7A2PQ8NGA2 310 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 OR52B6Q8NGF0 335 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 CYB5D2Q8WUJ1 264 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 C1orf74Q96LT6 269 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 PSKH2Q96QS6 385 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 EXD2Q9NVH0 621 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 AHSPQ9NZD4 102 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 TMCO1Q9UM00 188 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 DNAJC15Q9Y5T4 150 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 UPK3BL1B0FP48 263 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 UPK3BL2E5RIL1 263 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 H6PDO95479 791 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 STK19P49842 368 aaPredicted RBP15.43■□□□□ 0.06
CUX1-211ENST00000546411 LAPTM4AQ15012 233 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 ALKAL1Q6UXT8 129 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 ISCA2Q86U28 154 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 CHPFQ8IZ52 775 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 SLC22A14Q9Y267 594 aa15.43■□□□□ 0.06
CUX1-211ENST00000546411 CAPN14A8MX76 684 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 K7EPI3 171 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 GRM6O15303 877 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 ANXA4P09525 319 aaPredicted RBP15.42■□□□□ 0.06
CUX1-211ENST00000546411 CD1DP15813 335 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 ALDH4A1P30038 563 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 PPM1AP35813 382 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 NSG1P42857 185 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 MRPS15P82914 257 aaKnown RBP15.42■□□□□ 0.06
CUX1-211ENST00000546411 CLLU1OSQ5K130 101 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 CWF19L1Q69YN2 538 aaKnown RBP15.42■□□□□ 0.06
CUX1-211ENST00000546411 CCDC103Q8IW40 242 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 ZNF599Q96NL3 588 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 GORASP1Q9BQQ3 440 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 KRT84Q9NSB2 600 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 C1orf109Q9NX04 203 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.42■□□□□ 0.064e-11■■■■■ 28.6
CUX1-211ENST00000546411 FPGTO14772 594 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 TLL1O43897 1013 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 DIRAS1O95057 198 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 RPS14P62263 151 aaKnown RBP15.42■□□□□ 0.06
CUX1-211ENST00000546411 SPANXN4Q5MJ08 99 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 CPTPQ5TA50 214 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 LYPLAL1Q5VWZ2 237 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 TYW3Q6IPR3 259 aaKnown RBP15.42■□□□□ 0.06
CUX1-211ENST00000546411 FAM171BQ6P995 826 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 KREMEN2Q8NCW0 462 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 PRORSD1PA6NEY8 169 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 CYP7B1O75881 506 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 GABRB3P28472 473 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 CYP2A13Q16696 494 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 PAGE2BQ5JRK9 111 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 MBOAT1Q6ZNC8 495 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 KIAA2013Q8IYS2 634 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 LRRC3Q9BY71 257 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 SPO11Q9Y5K1 396 aa15.42■□□□□ 0.06
CUX1-211ENST00000546411 SLC22A2O15244 555 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 LAG3P18627 525 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 MAGP20916 626 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 PTPRRQ15256 657 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 TLR1Q15399 786 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 SNX20Q7Z614 316 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 RHBGQ9H310 441 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 RNF11Q9Y3C5 154 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 INPPL1O15357 1258 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 PAPSS2O95340 614 aaPredicted RBP15.41■□□□□ 0.06
CUX1-211ENST00000546411 POP4O95707 220 aaKnown RBP15.41■□□□□ 0.06
CUX1-211ENST00000546411 DBTP11182 482 aaKnown RBP15.41■□□□□ 0.06
CUX1-211ENST00000546411 POU2F1P14859 743 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 CCNA2P20248 432 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 PRKACGP22612 351 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 NFKB2Q00653 900 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 MERTKQ12866 999 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 CTC1Q2NKJ3 1217 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 SULT1C3Q6IMI6 304 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 ZNF605Q86T29 641 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 PTERQ96BW5 349 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 FBXL20Q96IG2 436 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 NSMCE3Q96MG7 304 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 CGREF1Q99674 301 aa15.41■□□□□ 0.06
CUX1-211ENST00000546411 KLHL25Q9H0H3 589 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms