RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 EIF3HO15372 352 aaKnown RBP eCLIP16.47■□□□□ 0.23
LTBR-215ENST00000546296 S1PR4O95977 384 aa16.47■□□□□ 0.23
LTBR-215ENST00000546296 RPS3P23396 243 aaKnown RBP eCLIP16.47■□□□□ 0.23
LTBR-215ENST00000546296 PREPP48147 710 aa16.47■□□□□ 0.23
LTBR-215ENST00000546296 UBE2IP63279 158 aaKnown RBP16.47■□□□□ 0.23
LTBR-215ENST00000546296 RPA4Q13156 261 aa16.47■□□□□ 0.23
LTBR-215ENST00000546296 BOP1Q14137 746 aaKnown RBP16.47■□□□□ 0.23
LTBR-215ENST00000546296 FASTKD3Q14CZ7 662 aaKnown RBP16.47■□□□□ 0.23
LTBR-215ENST00000546296 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.47■□□□□ 0.23
LTBR-215ENST00000546296 NAPRTQ6XQN6 538 aa16.47■□□□□ 0.23
LTBR-215ENST00000546296 RBM44Q6ZP01 1051 aaKnown RBP16.47■□□□□ 0.23
LTBR-215ENST00000546296 ZNF438Q7Z4V0 828 aa16.47■□□□□ 0.23
LTBR-215ENST00000546296 ZNF761Q86XN6 746 aaPredicted RBP16.47■□□□□ 0.23
LTBR-215ENST00000546296 DENND6AQ8IWF6 608 aa16.47■□□□□ 0.23
LTBR-215ENST00000546296 KRT222Q8N1A0 295 aa16.47■□□□□ 0.23
LTBR-215ENST00000546296 FBXO25Q8TCJ0 367 aa16.47■□□□□ 0.23
LTBR-215ENST00000546296 LPGAT1Q92604 370 aa16.47■□□□□ 0.23
LTBR-215ENST00000546296 AHCYL2Q96HN2 611 aaKnown RBP16.47■□□□□ 0.23
LTBR-215ENST00000546296 C12orf66Q96MD2 445 aa16.47■□□□□ 0.23
LTBR-215ENST00000546296 PANX3Q96QZ0 392 aa16.47■□□□□ 0.23
LTBR-215ENST00000546296 INSM2Q96T92 566 aaPredicted RBP16.47■□□□□ 0.23
LTBR-215ENST00000546296 FBXO6Q9NRD1 293 aaPredicted RBP16.47■□□□□ 0.23
LTBR-215ENST00000546296 FAM114A2Q9NRY5 505 aa16.47■□□□□ 0.23
LTBR-215ENST00000546296 KLK13Q9UKR3 277 aa16.47■□□□□ 0.23
LTBR-215ENST00000546296 FBXO5Q9UKT4 447 aa16.47■□□□□ 0.23
LTBR-215ENST00000546296 ANGPTL2Q9UKU9 493 aa16.47■□□□□ 0.23
LTBR-215ENST00000546296 PCDHB1Q9Y5F3 818 aa16.47■□□□□ 0.23
LTBR-215ENST00000546296 CFAP20Q9Y6A4 193 aaKnown RBP16.47■□□□□ 0.23
LTBR-215ENST00000546296 ESPNB1AK53 854 aa16.46■□□□□ 0.23
LTBR-215ENST00000546296 H3BMM5 538 aa16.46■□□□□ 0.23
LTBR-215ENST00000546296 B4GAT1O43505 415 aa16.46■□□□□ 0.23
LTBR-215ENST00000546296 ESR1P03372 595 aa16.46■□□□□ 0.23
LTBR-215ENST00000546296 SLC1A2P43004 574 aa16.46■□□□□ 0.23
LTBR-215ENST00000546296 MAPK9P45984 424 aa16.46■□□□□ 0.23
LTBR-215ENST00000546296 CARSP49589 748 aaKnown RBP16.46■□□□□ 0.23
LTBR-215ENST00000546296 CSE1LP55060 971 aaKnown RBP16.46■□□□□ 0.23
LTBR-215ENST00000546296 FOXK2Q01167 660 aa16.46■□□□□ 0.23
LTBR-215ENST00000546296 PLOD1Q02809 727 aaPredicted RBP16.46■□□□□ 0.23
LTBR-215ENST00000546296 TARDBPQ13148 414 aaKnown RBP eCLIP16.46■□□□□ 0.23
LTBR-215ENST00000546296 TMED2Q15363 201 aa16.46■□□□□ 0.23
LTBR-215ENST00000546296 ZDHHC24Q6UX98 284 aa16.46■□□□□ 0.23
LTBR-215ENST00000546296 USP53Q70EK8 1073 aa16.46■□□□□ 0.23
LTBR-215ENST00000546296 MARCH9Q86YJ5 346 aa16.46■□□□□ 0.23
LTBR-215ENST00000546296 SPDYE1Q8NFV5 336 aaPredicted RBP16.46■□□□□ 0.23
LTBR-215ENST00000546296 OR10G6Q8NH81 332 aa16.46■□□□□ 0.23
LTBR-215ENST00000546296 GSDMBQ8TAX9 411 aa16.46■□□□□ 0.23
LTBR-215ENST00000546296 IFT81Q8WYA0 676 aa16.46■□□□□ 0.23
LTBR-215ENST00000546296 TMEM159Q96B96 161 aa16.46■□□□□ 0.23
LTBR-215ENST00000546296 CERS2Q96G23 380 aa16.46■□□□□ 0.23
LTBR-215ENST00000546296 DEPDC7Q96QD5 511 aa16.46■□□□□ 0.23
LTBR-215ENST00000546296 WDR83Q9BRX9 315 aaKnown RBP16.46■□□□□ 0.23
LTBR-215ENST00000546296 FOXP3Q9BZS1 431 aa16.46■□□□□ 0.23
LTBR-215ENST00000546296 ZMYND15Q9H091 742 aa16.46■□□□□ 0.23
LTBR-215ENST00000546296 CCDC68Q9H2F9 335 aa16.46■□□□□ 0.23
LTBR-215ENST00000546296 POT1Q9NUX5 634 aa16.46■□□□□ 0.23
LTBR-215ENST00000546296 DMGDHQ9UI17 866 aaKnown RBP16.46■□□□□ 0.23
LTBR-215ENST00000546296 ATXN7L1Q9ULK2 861 aaPredicted RBP16.46■□□□□ 0.23
LTBR-215ENST00000546296 GOLGA4Q13439 2230 aaKnown RBP16.46■□□□□ 0.23
LTBR-215ENST00000546296 PRAMEF33A0A0G2JMD5 474 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 A0A1W2PQM1 296 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 KPNA5O15131 536 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 CASC3O15234 703 aaKnown RBP16.45■□□□□ 0.22
LTBR-215ENST00000546296 ZNF500O60304 480 aaPredicted RBP16.45■□□□□ 0.22
LTBR-215ENST00000546296 TCEA3O75764 348 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 APOA4P06727 396 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 F7P08709 466 aaPredicted RBP16.45■□□□□ 0.22
LTBR-215ENST00000546296 MTHFD1P11586 935 aaKnown RBP16.45■□□□□ 0.22
LTBR-215ENST00000546296 CHRM3P20309 590 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 PDHA2P29803 388 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 CCR7P32248 378 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 MPP1Q00013 466 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 HSPA14Q0VDF9 509 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 CBLBQ13191 982 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 NR1D2Q14995 579 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 ZNF658BQ4V348 819 aaPredicted RBP16.45■□□□□ 0.22
LTBR-215ENST00000546296 ZNF789Q5FWF6 425 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 CDCP2Q5VXM1 449 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 NKAIN2Q5VXU1 208 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 STEAP4Q687X5 459 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 CAPRIN2Q6IMN6 1127 aaKnown RBP16.45■□□□□ 0.22
LTBR-215ENST00000546296 CAPN12Q6ZSI9 719 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 TMEM26Q6ZUK4 368 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 RBM12BQ8IXT5 1001 aaKnown RBP16.45■□□□□ 0.22
LTBR-215ENST00000546296 ASZ1Q8WWH4 475 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 SEC14L1Q92503 715 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 RMDN2Q96LZ7 410 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 FERD3LQ96RJ6 166 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 SLC40A1Q9NP59 571 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 WASF3Q9UPY6 502 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 NEUROG3Q9Y4Z2 214 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 HEBP2Q9Y5Z4 205 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 COLEC10Q9Y6Z7 277 aa16.45■□□□□ 0.22
LTBR-215ENST00000546296 IGHV1OR21-1A0A087WYE8 117 aa16.44■□□□□ 0.22
LTBR-215ENST00000546296 E5RI56 91 aa16.44■□□□□ 0.22
LTBR-215ENST00000546296 NTN3O00634 580 aaPredicted RBP16.44■□□□□ 0.22
LTBR-215ENST00000546296 CSO75390 466 aaKnown RBP16.44■□□□□ 0.22
LTBR-215ENST00000546296 PKMP14618 531 aaKnown RBP16.44■□□□□ 0.22
LTBR-215ENST00000546296 AOAHP28039 575 aa16.44■□□□□ 0.22
LTBR-215ENST00000546296 CD1CP29017 333 aa16.44■□□□□ 0.22
LTBR-215ENST00000546296 CD151P48509 253 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms