RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 TOX3O15405 576 aaPredicted RBP15.37■□□□□ 0.05
CCDC78-216ENST00000544996 FGF3P11487 239 aaPredicted RBP15.37■□□□□ 0.05
CCDC78-216ENST00000544996 CCL4P13236 92 aa15.37■□□□□ 0.05
CCDC78-216ENST00000544996 MGAT1P26572 445 aa15.37■□□□□ 0.05
CCDC78-216ENST00000544996 NDUFS1P28331 727 aa15.37■□□□□ 0.05
CCDC78-216ENST00000544996 ETV5P41161 510 aa15.37■□□□□ 0.05
CCDC78-216ENST00000544996 TSPAN7P41732 249 aa15.37■□□□□ 0.05
CCDC78-216ENST00000544996 MAGEA6P43360 314 aa15.37■□□□□ 0.05
CCDC78-216ENST00000544996 TLE3Q04726 772 aa15.37■□□□□ 0.05
CCDC78-216ENST00000544996 KCNJ11Q14654 390 aa15.37■□□□□ 0.05
CCDC78-216ENST00000544996 PPP1R7Q15435 360 aa15.37■□□□□ 0.05
CCDC78-216ENST00000544996 ARMC3Q5W041 872 aa15.37■□□□□ 0.05
CCDC78-216ENST00000544996 CAPRIN2Q6IMN6 1127 aaKnown RBP15.37■□□□□ 0.05
CCDC78-216ENST00000544996 MICALCLQ6ZW33 695 aa15.37■□□□□ 0.05
CCDC78-216ENST00000544996 ARHGAP22Q7Z5H3 698 aa15.37■□□□□ 0.05
CCDC78-216ENST00000544996 SPDYE1Q8NFV5 336 aaPredicted RBP15.37■□□□□ 0.05
CCDC78-216ENST00000544996 GPR150Q8NGU9 434 aa15.37■□□□□ 0.05
CCDC78-216ENST00000544996 TGM7Q96PF1 710 aa15.37■□□□□ 0.05
CCDC78-216ENST00000544996 ASPSCR1Q9BZE9 553 aa15.37■□□□□ 0.05
CCDC78-216ENST00000544996 CATSPERZQ9NTU4 200 aa15.37■□□□□ 0.05
CCDC78-216ENST00000544996 OGFRQ9NZT2 677 aa15.37■□□□□ 0.05
CCDC78-216ENST00000544996 ACSL6Q9UKU0 697 aa15.37■□□□□ 0.05
CCDC78-216ENST00000544996 PYCARDQ9ULZ3 195 aa15.37■□□□□ 0.05
CCDC78-216ENST00000544996 MN1Q10571 1320 aaPredicted RBP15.37■□□□□ 0.05
CCDC78-216ENST00000544996 ACACAQ13085 2346 aa15.37■□□□□ 0.05
CCDC78-216ENST00000544996 ZFC3H1O60293 1989 aaKnown RBP15.36■□□□□ 0.05
CCDC78-216ENST00000544996 UNC13CQ8NB66 2214 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 URB1O60287 2271 aaKnown RBP15.36■□□□□ 0.05
CCDC78-216ENST00000544996 TCRBV7S3A2A0A539 114 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 CTAGE9A4FU28 777 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 EFCAB7A8K855 629 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 LIN7AO14910 233 aaPredicted RBP15.36■□□□□ 0.05
CCDC78-216ENST00000544996 CD3EAPO15446 510 aaKnown RBP15.36■□□□□ 0.05
CCDC78-216ENST00000544996 CAPN5O15484 640 aaPredicted RBP15.36■□□□□ 0.05
CCDC78-216ENST00000544996 PRAMEF10O60809 474 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 RASSF9O75901 435 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 C9P02748 559 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 ANKRD34CP0C6C1 535 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 CD82P27701 267 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 CD151P48509 253 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 TTPAP49638 278 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 UCNP55089 124 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 RAB15P59190 212 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 PLOD1Q02809 727 aaPredicted RBP15.36■□□□□ 0.05
CCDC78-216ENST00000544996 KCTD19Q17RG1 926 aaPredicted RBP15.36■□□□□ 0.05
CCDC78-216ENST00000544996 IRGCQ6NXR0 463 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 CASC4Q6P4E1 433 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 ZNF534Q76KX8 674 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 LILRA3Q8N6C8 439 aaPredicted RBP15.36■□□□□ 0.05
CCDC78-216ENST00000544996 CPT1BQ92523 772 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 RSC1A1Q92681 617 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 C9orf72Q96LT7 481 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 RMDN2Q96LZ7 410 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 NAPGQ99747 312 aaPredicted RBP15.36■□□□□ 0.05
CCDC78-216ENST00000544996 KIFC1Q9BW19 673 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 TSSK1BQ9BXA7 367 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 RAB33BQ9H082 229 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 MRM3Q9HC36 420 aaKnown RBP15.36■□□□□ 0.05
CCDC78-216ENST00000544996 XAB2Q9HCS7 855 aaKnown RBP15.36■□□□□ 0.05
CCDC78-216ENST00000544996 TREX1Q9NSU2 369 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 SYBUQ9NX95 663 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 SLC39A1Q9NY26 324 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 SAMD15Q9P1V8 674 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 EPHA6Q9UF33 1036 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 NEU2Q9Y3R4 380 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 PCDHB11Q9Y5F2 797 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 PCDHGA3Q9Y5H0 932 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 SAR1BQ9Y6B6 198 aa15.36■□□□□ 0.05
CCDC78-216ENST00000544996 ANKRD11Q6UB99 2663 aaPredicted RBP15.35■□□□□ 0.05
CCDC78-216ENST00000544996 BPTFQ12830 3046 aa15.35■□□□□ 0.05
CCDC78-216ENST00000544996 MAGEB16A2A368 324 aa15.35■□□□□ 0.05
CCDC78-216ENST00000544996 C9orf172C9J069 976 aa15.35■□□□□ 0.05
CCDC78-216ENST00000544996 OR1I1O60431 355 aa15.35■□□□□ 0.05
CCDC78-216ENST00000544996 MLNP12872 115 aa15.35■□□□□ 0.05
CCDC78-216ENST00000544996 PAMP19021 973 aa15.35■□□□□ 0.05
CCDC78-216ENST00000544996 NMBRP28336 390 aa15.35■□□□□ 0.05
CCDC78-216ENST00000544996 GFERP55789 205 aa15.35■□□□□ 0.05
CCDC78-216ENST00000544996 DCAF12Q5T6F0 453 aa15.35■□□□□ 0.05
CCDC78-216ENST00000544996 PAPD7Q5XG87 772 aaKnown RBP15.35■□□□□ 0.05
CCDC78-216ENST00000544996 ARMC6Q6NXE6 501 aa15.35■□□□□ 0.05
CCDC78-216ENST00000544996 XKR5Q6UX68 686 aa15.35■□□□□ 0.05
CCDC78-216ENST00000544996 SDCCAG8Q86SQ7 713 aaPredicted RBP15.35■□□□□ 0.05
CCDC78-216ENST00000544996 MPP5Q8N3R9 675 aa15.35■□□□□ 0.05
CCDC78-216ENST00000544996 OTUD6BQ8N6M0 293 aa15.35■□□□□ 0.05
CCDC78-216ENST00000544996 MCUQ8NE86 351 aa15.35■□□□□ 0.05
CCDC78-216ENST00000544996 ELMO1Q92556 727 aa15.35■□□□□ 0.05
CCDC78-216ENST00000544996 ART4Q93070 314 aa15.35■□□□□ 0.05
CCDC78-216ENST00000544996 TEFMQ96QE5 360 aaKnown RBP15.35■□□□□ 0.05
CCDC78-216ENST00000544996 FERD3LQ96RJ6 166 aa15.35■□□□□ 0.05
CCDC78-216ENST00000544996 DDA1Q9BW61 102 aa15.35■□□□□ 0.05
CCDC78-216ENST00000544996 OR52A5Q9H2C5 316 aa15.35■□□□□ 0.05
CCDC78-216ENST00000544996 KIR3DX1Q9H7L2 352 aa15.35■□□□□ 0.05
CCDC78-216ENST00000544996 WDR70Q9NW82 654 aa15.35■□□□□ 0.05
CCDC78-216ENST00000544996 OCIAD1Q9NX40 245 aa15.35■□□□□ 0.05
CCDC78-216ENST00000544996 SLC24A2Q9UI40 661 aa15.35■□□□□ 0.05
CCDC78-216ENST00000544996 SOX13Q9UN79 622 aa15.35■□□□□ 0.05
CCDC78-216ENST00000544996 PRSS21Q9Y6M0 314 aa15.35■□□□□ 0.05
CCDC78-216ENST00000544996 SDR42E2A6NKP2 422 aa15.34■□□□□ 0.05
CCDC78-216ENST00000544996 PFDN6O15212 129 aa15.34■□□□□ 0.05
CCDC78-216ENST00000544996 AVILO75366 819 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms