RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 ALDOAP04075 364 aaKnown RBP11.67□□□□□ -0.54
DDB1-223ENST00000543658 RETP07949 1114 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 SLC35G4P0C7Q5 338 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 SLC2A4P14672 509 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 ZNF37AP17032 561 aaPredicted RBP11.67□□□□□ -0.54
DDB1-223ENST00000543658 AOAHP28039 575 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 CCR7P32248 378 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 HALP42357 657 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 CTSKP43235 329 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 MAPK9P45984 424 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 CLCN7P51798 805 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 CTBSQ01459 385 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 GRIK2Q13002 908 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 RPA4Q13156 261 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 NFE2L1Q14494 772 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 ZNF460Q14592 562 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 ZKSCAN8Q15776 578 aaPredicted RBP11.67□□□□□ -0.54
DDB1-223ENST00000543658 KIF19Q2TAC6 998 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 PRRT3Q5FWE3 981 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 AGBL2Q5U5Z8 902 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 SLC23A3Q6PIS1 610 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 SLC30A9Q6PML9 568 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 PAQR3Q6TCH7 311 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 TIFABQ6ZNK6 161 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 TAF8Q7Z7C8 310 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 ZNF547Q8IVP9 402 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 CEP97Q8IW35 865 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 ACVR1CQ8NER5 493 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 LMX1AQ8TE12 382 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 LINGO1Q96FE5 620 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 ELF4Q99607 663 aaPredicted RBP11.67□□□□□ -0.54
DDB1-223ENST00000543658 TMEM168Q9H0V1 697 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 TMBIM4Q9HC24 238 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 LATS2Q9NRM7 1088 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 TM7SF3Q9NS93 570 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 ZNF446Q9NWS9 450 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 EURLQ9NYK6 297 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 ACSL5Q9ULC5 683 aa11.67□□□□□ -0.54
DDB1-223ENST00000543658 GOLGA8RI6L899 631 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 COPEO14579 308 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 AQP9O43315 295 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 SASH3O75995 380 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 C2P06681 752 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 ANXA6P08133 673 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 LTA4HP09960 611 aaKnown RBP11.66□□□□□ -0.54
DDB1-223ENST00000543658 CCDC166P0CW27 439 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 PYGBP11216 843 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 KRT4P19013 534 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 PREPP48147 710 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 CCT8P50990 548 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 DMPKQ09013 629 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 CSHL1Q14406 222 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 SEPT7Q16181 437 aaKnown RBP11.66□□□□□ -0.54
DDB1-223ENST00000543658 FAM83EQ2M2I3 478 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 TSNAXIP1Q2TAA8 658 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 AGAP9Q5VTM2 703 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 NAPRTQ6XQN6 538 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 FRA10AC1Q70Z53 315 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 C11orf96Q7Z7L8 435 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 TRABD2AQ86V40 505 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 CYP4X1Q8N118 509 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 C4orf33Q8N1A6 199 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 ISL2Q96A47 359 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 ALKBH8Q96BT7 664 aaKnown RBP11.66□□□□□ -0.54
DDB1-223ENST00000543658 SCYL1Q96KG9 808 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 LRRC61Q9BV99 259 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 GTPBP2Q9BX10 602 aaKnown RBP11.66□□□□□ -0.54
DDB1-223ENST00000543658 DPEP2Q9H4A9 486 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 FAM86C1Q9NVL1 165 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 NOVA2Q9UNW9 492 aaKnown RBP11.66□□□□□ -0.54
DDB1-223ENST00000543658 PCYT1BQ9Y5K3 369 aaPredicted RBP11.66□□□□□ -0.54
DDB1-223ENST00000543658 A0A0C4DFX4 3053 aa11.66□□□□□ -0.54
DDB1-223ENST00000543658 A0A1W2PPM1 405 aa11.65□□□□□ -0.54
DDB1-223ENST00000543658 SLC5A10A0PJK1 596 aa11.65□□□□□ -0.54
DDB1-223ENST00000543658 HMX2A2RU54 273 aa11.65□□□□□ -0.54
DDB1-223ENST00000543658 NEMP2A6NFY4 417 aa11.65□□□□□ -0.54
DDB1-223ENST00000543658 HMGB1P1B2RPK0 211 aaPredicted RBP11.65□□□□□ -0.54
DDB1-223ENST00000543658 PATE3B3GLJ2 98 aa11.65□□□□□ -0.54
DDB1-223ENST00000543658 AGPSO00116 658 aa11.65□□□□□ -0.54
DDB1-223ENST00000543658 ARHGAP33O14559 1287 aa11.65□□□□□ -0.54
DDB1-223ENST00000543658 SDC3O75056 442 aa11.65□□□□□ -0.54
DDB1-223ENST00000543658 GLRA3O75311 464 aa11.65□□□□□ -0.54
DDB1-223ENST00000543658 RFPL1O75677 317 aa11.65□□□□□ -0.54
DDB1-223ENST00000543658 PIAS2O75928 621 aa11.65□□□□□ -0.54
DDB1-223ENST00000543658 LMNAP02545 664 aaKnown RBP11.65□□□□□ -0.54
DDB1-223ENST00000543658 FUCA1P04066 466 aa11.65□□□□□ -0.54
DDB1-223ENST00000543658 RPN2P04844 631 aa11.65□□□□□ -0.54
DDB1-223ENST00000543658 SLC35E2BP0CK96 405 aa11.65□□□□□ -0.54
DDB1-223ENST00000543658 MPC1LP0DKB6 136 aa11.65□□□□□ -0.54
DDB1-223ENST00000543658 COL6A2P12110 1019 aa11.65□□□□□ -0.54
DDB1-223ENST00000543658 AK4P27144 223 aaPredicted RBP11.65□□□□□ -0.54
DDB1-223ENST00000543658 SLC26A3P40879 764 aa11.65□□□□□ -0.54
DDB1-223ENST00000543658 MAGEA12P43365 314 aa11.65□□□□□ -0.54
DDB1-223ENST00000543658 CCT5P48643 541 aa11.65□□□□□ -0.54
DDB1-223ENST00000543658 CLCNKAP51800 687 aa11.65□□□□□ -0.54
DDB1-223ENST00000543658 ATP6V0D1P61421 351 aa11.65□□□□□ -0.54
DDB1-223ENST00000543658 BIRC2Q13490 618 aa11.65□□□□□ -0.54
DDB1-223ENST00000543658 C1orf61Q13536 156 aa11.65□□□□□ -0.54
DDB1-223ENST00000543658 KRT33BQ14525 404 aa11.65□□□□□ -0.54
DDB1-223ENST00000543658 CCDC6Q16204 474 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms