RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-221ENST00000543545 ZBTB9Q96C00 473 aa9.96□□□□□ -0.82
CPSF7-221ENST00000543545 GPR22Q99680 433 aa9.96□□□□□ -0.82
CPSF7-221ENST00000543545 WWP1Q9H0M0 922 aa9.96□□□□□ -0.82
CPSF7-221ENST00000543545 CAB39LQ9H9S4 337 aa9.96□□□□□ -0.82
CPSF7-221ENST00000543545 PPCSQ9HAB8 311 aa9.96□□□□□ -0.82
CPSF7-221ENST00000543545 DNAAF2Q9NVR5 837 aaKnown RBP9.96□□□□□ -0.82
CPSF7-221ENST00000543545 PSMC3IPQ9P2W1 217 aaPredicted RBP9.96□□□□□ -0.82
CPSF7-221ENST00000543545 GALPQ9UBC7 116 aa9.96□□□□□ -0.82
CPSF7-221ENST00000543545 TBC1D29Q9UFV1 150 aa9.96□□□□□ -0.82
CPSF7-221ENST00000543545 SLC24A2Q9UI40 661 aa9.96□□□□□ -0.82
CPSF7-221ENST00000543545 ZNF180Q9UJW8 692 aa9.96□□□□□ -0.82
CPSF7-221ENST00000543545 TLK1Q9UKI8 766 aa9.96□□□□□ -0.82
CPSF7-221ENST00000543545 DHRS7Q9Y394 339 aa9.96□□□□□ -0.82
CPSF7-221ENST00000543545 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.95□□□□□ -0.82
CPSF7-221ENST00000543545 SLC5A10A0PJK1 596 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 TRIM49D1C9J1S8 452 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 CDX4O14627 284 aaPredicted RBP9.95□□□□□ -0.82
CPSF7-221ENST00000543545 TPP1O14773 563 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 PHGDHO43175 533 aaKnown RBP9.95□□□□□ -0.82
CPSF7-221ENST00000543545 PCDHGA12O60330 932 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 GDF9O60383 454 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 SNRPAP09012 282 aaKnown RBP9.95□□□□□ -0.82
CPSF7-221ENST00000543545 NUDT17P0C025 328 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 ZNF883P0CG24 379 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 SLC2A4P14672 509 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 FDXRP22570 491 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 TGM1P22735 817 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 CNTFP26441 200 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 CRABP2P29373 138 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 TYK2P29597 1187 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 PDHA2P29803 388 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 RGS4P49798 205 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 SERPINB8P50452 374 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 CLCN7P51798 805 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 PGGT1BP53609 377 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 DMPKQ09013 629 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 RPA4Q13156 261 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 ZNF460Q14592 562 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 ACSBG2Q5FVE4 666 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 STPG1Q5TH74 334 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 ADGRD1Q6QNK2 874 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 PAQR3Q6TCH7 311 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 CPNE9Q8IYJ1 553 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 KIAA2013Q8IYS2 634 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 EPS8L3Q8TE67 593 aaKnown RBP9.95□□□□□ -0.82
CPSF7-221ENST00000543545 GLMNQ92990 594 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 CXorf40BQ96DE9 158 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 FOPNLQ96NB1 174 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 RUFY1Q96T51 708 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 SLC30A3Q99726 388 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 OLFM1Q99784 485 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 DUSP23Q9BVJ7 150 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 ROPN1BQ9BZX4 212 aaPredicted RBP9.95□□□□□ -0.82
CPSF7-221ENST00000543545 CENPHQ9H3R5 247 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 ROPN1Q9HAT0 212 aaPredicted RBP9.95□□□□□ -0.82
CPSF7-221ENST00000543545 SYTL2Q9HCH5 934 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 GPAMQ9HCL2 828 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 LATS2Q9NRM7 1088 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 IMP3Q9NV31 184 aaKnown RBP9.95□□□□□ -0.82
CPSF7-221ENST00000543545 NLGN3Q9NZ94 848 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 FETUBQ9UGM5 382 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 PCDHGB2Q9Y5G2 931 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 ST14Q9Y5Y6 855 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 PLXND1Q9Y4D7 1925 aa9.95□□□□□ -0.82
CPSF7-221ENST00000543545 EML5Q05BV3 1969 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 OR5K4A6NMS3 321 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 TRIM38O00635 465 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 SIGLEC6O43699 453 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 CDH16O75309 829 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 GPC4O75487 556 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 TCEA3O75764 348 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 VIPP01282 170 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 MT-ND3P03897 115 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 F3P13726 295 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 H2AFXP16104 143 aaPredicted RBP9.94□□□□□ -0.82
CPSF7-221ENST00000543545 KRT15P19012 456 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 GCAP28676 217 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 GRK6P43250 576 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 RPIAP49247 311 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 PPM1FP49593 454 aaPredicted RBP9.94□□□□□ -0.82
CPSF7-221ENST00000543545 IL2P60568 153 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 RAB10P61026 200 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 DAB2P98082 770 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 SLC14A1Q13336 389 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 CASP8Q14790 479 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 KRT71Q3SY84 523 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 TAF1BQ53T94 588 aaPredicted RBP9.94□□□□□ -0.82
CPSF7-221ENST00000543545 CEP85LQ5SZL2 805 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 AGAP9Q5VTM2 703 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 IYDQ6PHW0 289 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 FBXO38Q6PIJ6 1188 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 ABRAXAS1Q6UWZ7 409 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 WASH2PQ6VEQ5 465 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 HDXQ7Z353 690 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 CMC1Q7Z7K0 106 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 SLC9B2Q86UD5 537 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 VRK3Q8IV63 474 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 SPNS2Q8IVW8 549 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 CEP97Q8IW35 865 aa9.94□□□□□ -0.82
CPSF7-221ENST00000543545 MYO1HQ8N1T3 1032 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms