RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 KIR2DS5Q14953 304 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 NR1D2Q14995 579 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 HSP90AA5PQ58FG0 334 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 ZNF789Q5FWF6 425 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 CTSL3PQ5NE16 218 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 PERM1Q5SV97 790 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 METRNLQ641Q3 311 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 TRMT10BQ6PF06 316 aaKnown RBP6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 IYDQ6PHW0 289 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 ABRAXAS1Q6UWZ7 409 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 EFL1Q7Z2Z2 1120 aaKnown RBP6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 DGLUCYQ7Z3D6 616 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 ZNF438Q7Z4V0 828 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 GALNT7Q86SF2 657 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 SDCCAG8Q86SQ7 713 aaPredicted RBP6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 SLCO6A1Q86UG4 719 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 LRRC6Q86X45 466 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 ARL14Q8N4G2 192 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 LILRA3Q8N6C8 439 aaPredicted RBP6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 IFI44Q8TCB0 444 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 MAPK15Q8TD08 544 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 NAT6Q93015 286 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 CCDC74AQ96AQ1 378 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 CCM2Q9BSQ5 444 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 OR52A5Q9H2C5 316 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 COG4Q9H9E3 785 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 SARS2Q9NP81 518 aaKnown RBP6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 FBXO6Q9NRD1 293 aaPredicted RBP6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 IARS2Q9NSE4 1012 aaKnown RBP6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 SCHIP1Q9P0W5 487 aaPredicted RBP6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 SLC17A6Q9P2U8 582 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 FAM8A1Q9UBU6 413 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 RABGEF1Q9UJ41 708 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 GNPTGQ9UJJ9 305 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 PSMD13Q9UNM6 376 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 APOBEC2Q9Y235 224 aaKnown RBP6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 WDR37Q9Y2I8 494 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 RNF215Q9Y6U7 377 aa6.84□□□□□ -1.31
LPCAT3-209ENST00000540060 SLC5A10A0PJK1 596 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 CPED1A4D0V7 1026 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 OR5K4A6NMS3 321 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 OR52A4PA6NMU1 304 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 IQCF5A8MTL0 148 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 LIN7AO14910 233 aaPredicted RBP6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 PFDN6O15212 129 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 CASC3O15234 703 aaKnown RBP6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 PPM1DO15297 605 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 C1QAP02745 245 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 ESR1P03372 595 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 RHOXF2BP0C7M4 288 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 SLC35G4P0C7Q5 338 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 PNLIPP16233 465 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 XRCC1P18887 633 aaPredicted RBP6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 SSTR1P30872 391 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 CCR7P32248 378 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 HALP42357 657 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 PREPP48147 710 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 LEPRP48357 1165 aaKnown RBP6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 CARSP49589 748 aaKnown RBP6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 GPX6P59796 221 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 MPP1Q00013 466 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 HHEXQ03014 270 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 RPA4Q13156 261 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 CUL1Q13616 776 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 BOP1Q14137 746 aaKnown RBP6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 CLCA4Q14CN2 919 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 SYTL3Q4VX76 610 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 TEX35Q5T0J7 233 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 TEDDM1Q5T9Z0 273 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 N4BP2L1Q5TBK1 243 aaPredicted RBP6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 CAPN12Q6ZSI9 719 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 KIAA0408Q6ZU52 694 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 SPRED1Q7Z699 444 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 RAB44Q7Z6P3 723 aaPredicted RBP6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 CCDC25Q86WR0 208 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 RELL1Q8IUW5 271 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 KRT222Q8N1A0 295 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 C2CD4AQ8NCU7 369 aaPredicted RBP6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 ANKK1Q8NFD2 765 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 OR6C4Q8NGE1 309 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 PYROXD1Q8WU10 500 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 ADAMTS14Q8WXS8 1223 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 IFT81Q8WYA0 676 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 ELMO1Q92556 727 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 C9orf72Q96LT7 481 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 RMDN2Q96LZ7 410 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 FMO2Q99518 471 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 CCDC3Q9BQI4 270 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 RHOXF2Q9BQY4 288 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 TSSK1BQ9BXA7 367 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 WWP1Q9H0M0 922 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 POT1Q9NUX5 634 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 MOCS1Q9NZB8 636 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 ZNF624Q9P2J8 865 aaPredicted RBP6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 LRIT1Q9P2V4 623 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 CPNE7Q9UBL6 633 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 FBXO5Q9UKT4 447 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 ACSL5Q9ULC5 683 aa6.83□□□□□ -1.32
LPCAT3-209ENST00000540060 CDYLQ9Y232 598 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms