RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 HSPA13P48723 471 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 HTRA4P83105 476 aaPredicted RBP13.78□□□□□ -0.2
LIMK1-208ENST00000538333 B4GALNT1Q00973 533 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 EMX2Q04743 252 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 NFYCQ13952 458 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 ABRAXAS2Q15018 415 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 CRY1Q16526 586 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 ATP13A5Q4VNC0 1218 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 DPY19L3Q6ZPD9 716 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 RFLNAQ6ZTI6 216 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 USP45Q70EL2 814 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 ZFAND4Q86XD8 727 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 KIAA2013Q8IYS2 634 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 FAM110BQ8TC76 370 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 TCEAL4Q96EI5 215 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 TRAPPC9Q96Q05 1148 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 HBEGFQ99075 208 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 CD244Q9BZW8 370 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 RDH14Q9HBH5 336 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 CCM2LQ9NUG4 571 aaPredicted RBP13.78□□□□□ -0.2
LIMK1-208ENST00000538333 ZDHHC3Q9NYG2 299 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 ACTR3BQ9P1U1 418 aa13.78□□□□□ -0.2
LIMK1-208ENST00000538333 LEF1Q9UJU2 399 aaPredicted RBP13.78□□□□□ -0.2
LIMK1-208ENST00000538333 ZFC3H1O60293 1989 aaKnown RBP13.77□□□□□ -0.2
LIMK1-208ENST00000538333 IGLV3-16A0A075B6K0 115 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 C7orf72A4D263 438 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 GRM6O15303 877 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 MOSPD3O75425 235 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 KATNA1O75449 491 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 STAMBPO95630 424 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 ARL1P40616 181 aaPredicted RBP13.77□□□□□ -0.21
LIMK1-208ENST00000538333 EPHA5P54756 1037 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 TIGD2Q4W5G0 525 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 MTX3Q5HYI7 312 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 RABL3Q5HYI8 236 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 SULT1C3Q6IMI6 304 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 RNF165Q6ZSG1 346 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 MILR1Q7Z6M3 343 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 ST13P4Q8IZP2 240 aaPredicted RBP13.77□□□□□ -0.21
LIMK1-208ENST00000538333 GOLM1Q8NBJ4 401 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 EME1Q96AY2 570 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 PAWRQ96IZ0 340 aaKnown RBP13.77□□□□□ -0.21
LIMK1-208ENST00000538333 EFHD1Q9BUP0 239 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 APOL5Q9BWW9 433 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 CEP44Q9C0F1 390 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 FAM192AQ9GZU8 254 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 COQ10BQ9H8M1 238 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 SLAMF8Q9P0V8 285 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 KLHL42Q9P2K6 505 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 EGFL7Q9UHF1 273 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 SLCO3A1Q9UIG8 710 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 PCDHGB4Q9UN71 923 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 PCDHGB5Q9Y5G0 923 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 SNX13Q9Y5W8 968 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 IRAK3Q9Y616 596 aa13.77□□□□□ -0.21
LIMK1-208ENST00000538333 GRXCR2A6NFK2 248 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 BNIP3LO60238 219 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 POP4O95707 220 aaKnown RBP13.76□□□□□ -0.21
LIMK1-208ENST00000538333 C1SP09871 688 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 GRIA2P42262 883 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 GDF5P43026 501 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 GSK3BP49841 420 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 ERVFC1P60507 584 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 PRKG2Q13237 762 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 CARD16Q5EG05 197 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 METTL2BQ6P1Q9 378 aaKnown RBP13.76□□□□□ -0.21
LIMK1-208ENST00000538333 AMIGO2Q86SJ2 522 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 PTRH1Q86Y79 214 aaKnown RBP13.76□□□□□ -0.21
LIMK1-208ENST00000538333 DNAJB14Q8TBM8 379 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 ASIC4Q96FT7 647 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 ZNF597Q96LX8 424 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 ZNF641Q96N77 438 aaPredicted RBP13.76□□□□□ -0.21
LIMK1-208ENST00000538333 EGFL8Q99944 293 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 SLC2A11Q9BYW1 496 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 ZDHHC6Q9H6R6 413 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 KCTD5Q9NXV2 234 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 SUN2Q9UH99 717 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 DYTNA2CJ06 578 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 ARPC2O15144 300 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 TIPRLO75663 272 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 UGT2B4P06133 528 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 CBSLP0DN79 551 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 G6PDP11413 515 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 CBSP35520 551 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 NR6A1Q15406 480 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 TTLL9Q3SXZ7 439 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 RFTN2Q52LD8 501 aaPredicted RBP13.76□□□□□ -0.21
LIMK1-208ENST00000538333 C6orf52Q5T4I8 152 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 CYP20A1Q6UW02 462 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 ERMP1Q7Z2K6 904 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 SPPL2CQ8IUH8 684 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 DPP10Q8N608 796 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 TCF25Q9BQ70 676 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 NTMT1Q9BV86 223 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 TRIM15Q9C019 465 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 ALG2Q9H553 416 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 C11orf49Q9H6J7 331 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 BRD9Q9H8M2 597 aa13.76□□□□□ -0.21
LIMK1-208ENST00000538333 INTS7Q9NVH2 962 aaKnown RBP13.76□□□□□ -0.21
LIMK1-208ENST00000538333 WWOXQ9NZC7 414 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms