RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 PCDHB9Q9Y5E1 797 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 TNPO3Q9Y5L0 923 aaKnown RBP9.11□□□□□ -0.95
DDB1-211ENST00000538280 BPTFQ12830 3046 aa9.11□□□□□ -0.95
DDB1-211ENST00000538280 SMIM31A0A1B0GVY4 71 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 TCRBV5S2A0A599 114 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 ZNF839A8K0R7 811 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 E5RI56 91 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 C5orf67F2Z3F1 127 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 K7ERQ8 282 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 ARNTLO00327 626 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 TXNDC9O14530 226 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 PRRG1O14668 218 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 ANKRD28O15084 1053 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 TAPBPO15533 448 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 GPR39O43194 453 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 CRCPO75575 148 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 STAMBPO95630 424 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 CTPS1P17812 591 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 PFKLP17858 780 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 CHRM3P20309 590 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 MSH3P20585 1137 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 ACRV1P26436 265 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 IL12AP29459 219 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 GSK3BP49841 420 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 HTR6P50406 440 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 CCNHP51946 323 aaPredicted RBP9.1□□□□□ -0.95
DDB1-211ENST00000538280 KCNK10P57789 538 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 CREMQ03060 361 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 TCF15Q12870 199 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 LMAN2Q12907 356 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 CDH18Q13634 790 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 RBBP7Q16576 425 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 PUS10Q3MIT2 529 aaKnown RBP9.1□□□□□ -0.95
DDB1-211ENST00000538280 GPR33Q49SQ1 333 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 MPPE1Q53F39 396 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 INTS11Q5TA45 600 aaKnown RBP9.1□□□□□ -0.95
DDB1-211ENST00000538280 PPP4R4Q6NUP7 873 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 LETMD1Q6P1Q0 360 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 TAS2R42Q7RTR8 314 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 CARM1Q86X55 608 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 ZFAND4Q86XD8 727 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 HOMEZQ8IX15 550 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 ADGRG5Q8IZF4 528 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 GALNT15Q8N3T1 639 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 SFRP1Q8N474 314 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 MFSD2AQ8NA29 543 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 FIBINQ8TAL6 211 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 ECHDC3Q96DC8 303 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 CCDC97Q96F63 343 aaPredicted RBP9.1□□□□□ -0.95
DDB1-211ENST00000538280 SLC45A3Q96JT2 553 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 TEX37Q96LM6 180 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 TSC22D3Q99576 134 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 EFHD1Q9BUP0 239 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 SPATA16Q9BXB7 569 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 MRPS26Q9BYN8 205 aaKnown RBP9.1□□□□□ -0.95
DDB1-211ENST00000538280 IGFLR1Q9H665 355 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 COQ10BQ9H8M1 238 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 PIDD1Q9HB75 910 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 ZFYVE1Q9HBF4 777 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 RDH14Q9HBH5 336 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 MRPL17Q9NRX2 175 aaKnown RBP9.1□□□□□ -0.95
DDB1-211ENST00000538280 FAM86C1Q9NVL1 165 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 ASIC5Q9NY37 505 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 SPG21Q9NZD8 308 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 EVLQ9UI08 416 aaPredicted RBP9.1□□□□□ -0.95
DDB1-211ENST00000538280 LSM7Q9UK45 103 aaKnown RBP9.1□□□□□ -0.95
DDB1-211ENST00000538280 CCL27Q9Y4X3 112 aa9.1□□□□□ -0.95
DDB1-211ENST00000538280 A0A0U1RQS6 177 aa9.09□□□□□ -0.95
DDB1-211ENST00000538280 NCF1BA6NI72 391 aaPredicted RBP9.09□□□□□ -0.95
DDB1-211ENST00000538280 IQCF5A8MTL0 148 aa9.09□□□□□ -0.95
DDB1-211ENST00000538280 NCF1CA8MVU1 366 aaPredicted RBP9.09□□□□□ -0.95
DDB1-211ENST00000538280 EIF3FO00303 357 aaPredicted RBP9.09□□□□□ -0.95
DDB1-211ENST00000538280 IFRD1O00458 451 aaPredicted RBP9.09□□□□□ -0.95
DDB1-211ENST00000538280 LSM1O15116 133 aaKnown RBP9.09□□□□□ -0.95
DDB1-211ENST00000538280 ARPC2O15144 300 aa9.09□□□□□ -0.95
DDB1-211ENST00000538280 RAD51BO15315 384 aa9.09□□□□□ -0.95
DDB1-211ENST00000538280 FFAR2O15552 330 aa9.09□□□□□ -0.95
DDB1-211ENST00000538280 HNRNPRO43390 633 aaKnown RBP9.09□□□□□ -0.95
DDB1-211ENST00000538280 SMAD6O43541 496 aaKnown RBP9.09□□□□□ -0.95
DDB1-211ENST00000538280 SLC22A3O75751 556 aa9.09□□□□□ -0.95
DDB1-211ENST00000538280 WDR47O94967 919 aa9.09□□□□□ -0.95
DDB1-211ENST00000538280 TNFAIP8O95379 198 aa9.09□□□□□ -0.95
DDB1-211ENST00000538280 PRAMEF1O95521 474 aa9.09□□□□□ -0.95
DDB1-211ENST00000538280 IGSF6O95976 241 aa9.09□□□□□ -0.95
DDB1-211ENST00000538280 TFAP2AP05549 437 aa9.09□□□□□ -0.95
DDB1-211ENST00000538280 GPIP06744 558 aa9.09□□□□□ -0.95
DDB1-211ENST00000538280 CAPN1P07384 714 aa9.09□□□□□ -0.95
DDB1-211ENST00000538280 ENO2P09104 434 aaPredicted RBP9.09□□□□□ -0.95
DDB1-211ENST00000538280 FAM58BPP0C7Q3 252 aa9.09□□□□□ -0.95
DDB1-211ENST00000538280 NCF1P14598 390 aaPredicted RBP9.09□□□□□ -0.95
DDB1-211ENST00000538280 BPIP17213 487 aa9.09□□□□□ -0.95
DDB1-211ENST00000538280 ITGALP20701 1170 aa9.09□□□□□ -0.95
DDB1-211ENST00000538280 DGKAP23743 735 aa9.09□□□□□ -0.95
DDB1-211ENST00000538280 HTR1EP28566 365 aa9.09□□□□□ -0.95
DDB1-211ENST00000538280 HNF1BP35680 557 aa9.09□□□□□ -0.95
DDB1-211ENST00000538280 BMPR1AP36894 532 aa9.09□□□□□ -0.95
DDB1-211ENST00000538280 SPAM1P38567 509 aa9.09□□□□□ -0.95
DDB1-211ENST00000538280 POLR2JP52435 117 aaKnown RBP9.09□□□□□ -0.95
DDB1-211ENST00000538280 NME5P56597 212 aa9.09□□□□□ -0.95
DDB1-211ENST00000538280 UFM1P61960 85 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms