RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 C1orf53Q5VUE5 145 aa8.12□□□□□ -1.11
ABCA4-207ENST00000536513 TMEM215Q68D42 235 aa8.12□□□□□ -1.11
ABCA4-207ENST00000536513 BNIPLQ7Z465 357 aa8.12□□□□□ -1.11
ABCA4-207ENST00000536513 MILR1Q7Z6M3 343 aa8.12□□□□□ -1.11
ABCA4-207ENST00000536513 ZSWIM9Q86XI8 627 aa8.12□□□□□ -1.11
ABCA4-207ENST00000536513 MFSD6LQ8IWD5 586 aa8.12□□□□□ -1.11
ABCA4-207ENST00000536513 JADE3Q92613 823 aa8.12□□□□□ -1.11
ABCA4-207ENST00000536513 TUBGCP3Q96CW5 907 aa8.12□□□□□ -1.11
ABCA4-207ENST00000536513 TRMT2BQ96GJ1 504 aaKnown RBP8.12□□□□□ -1.11
ABCA4-207ENST00000536513 SLC30A3Q99726 388 aa8.12□□□□□ -1.11
ABCA4-207ENST00000536513 HEPHQ9BQS7 1158 aa8.12□□□□□ -1.11
ABCA4-207ENST00000536513 ILKAPQ9H0C8 392 aaPredicted RBP8.12□□□□□ -1.11
ABCA4-207ENST00000536513 CACNA1GO43497 2377 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 ABCA7Q8IZY2 2146 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 A0A1W2PP55 124 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 SLC9A3R1O14745 358 aaPredicted RBP8.11□□□□□ -1.11
ABCA4-207ENST00000536513 CBFA2T3O75081 653 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 POP4O95707 220 aaKnown RBP8.11□□□□□ -1.11
ABCA4-207ENST00000536513 IGLV3-27P01718 113 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 LTA4HP09960 611 aaKnown RBP8.11□□□□□ -1.11
ABCA4-207ENST00000536513 LINC00032P0C843 101 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 MSH3P20585 1137 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 GPR1P46091 355 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 POU4F1Q01851 419 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 CPSF6Q16630 551 aaKnown RBP eCLIP8.11□□□□□ -1.11
ABCA4-207ENST00000536513 ZNF542PQ5EBM4 170 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 GDPD4Q6W3E5 623 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 FBXO39Q8N4B4 442 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 HMGB4Q8WW32 186 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 CAPSLQ8WWF8 208 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 SH3KBP1Q96B97 665 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 LRCH3Q96II8 777 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 FEM1CQ96JP0 617 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 MYADMQ96S97 322 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 RC3H2Q9HBD1 1191 aaKnown RBP8.11□□□□□ -1.11
ABCA4-207ENST00000536513 CCDC167Q9P0B6 97 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 C6orf203Q9P0P8 240 aaPredicted RBP8.11□□□□□ -1.11
ABCA4-207ENST00000536513 SPATA7Q9P0W8 599 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 ERVW-1Q9UQF0 538 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 DMTF1Q9Y222 760 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 CA5BQ9Y2D0 317 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 GREB1Q4ZG55 1949 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 IGLV3-10A0A075B6K4 115 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 SAC3D1A6NKF1 404 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 NFATC1O95644 943 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 PRLP01236 227 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 DLDP09622 509 aaKnown RBP8.11□□□□□ -1.11
ABCA4-207ENST00000536513 PKMP14618 531 aaKnown RBP8.11□□□□□ -1.11
ABCA4-207ENST00000536513 ZNF7P17097 686 aaPredicted RBP8.11□□□□□ -1.11
ABCA4-207ENST00000536513 HSPA7P48741 367 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 IL2P60568 153 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 ZBTB49Q6ZSB9 765 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 CROCCP3Q8IVE0 287 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 ZNF683Q8IZ20 524 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 LILRA3Q8N6C8 439 aaPredicted RBP8.11□□□□□ -1.11
ABCA4-207ENST00000536513 GPR26Q8NDV2 337 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 VN1R2Q8NFZ6 395 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 STYXQ8WUJ0 223 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 GATA6Q92908 595 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 TSPAN17Q96FV3 270 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 COPS8Q99627 209 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 PLA2G2FQ9BZM2 168 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 ARL15Q9NXU5 204 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 IL37Q9NZH6 218 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 SARDHQ9UL12 918 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 TBC1D30Q9Y2I9 924 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 MYO16Q9Y6X6 1858 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 PDZK1P1A8MUH7 402 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 DLX3O60479 287 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 CRHR1P34998 444 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 KCNC1P48547 511 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 ENTPD1P49961 510 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 CAMK2BQ13554 666 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 NR1D2Q14995 579 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 PON2Q15165 354 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 GPR107Q5VW38 600 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 CGB2Q6NT52 195 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 CYP2R1Q6VVX0 501 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 HTR3DQ70Z44 454 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 FIBINQ8TAL6 211 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 RLN3Q8WXF3 142 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 ZNF707Q96C28 371 aaPredicted RBP8.11□□□□□ -1.11
ABCA4-207ENST00000536513 PANX3Q96QZ0 392 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 SLC7A5P2Q9GIP4 190 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 OR2AG1Q9H205 316 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 TIMMDC1Q9NPL8 285 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 RWDD3Q9Y3V2 267 aa8.11□□□□□ -1.11
ABCA4-207ENST00000536513 PDCD11Q14690 1871 aaKnown RBP8.1□□□□□ -1.11
ABCA4-207ENST00000536513 ZNF487B1APH4 448 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 BHMG1C9JSJ3 638 aaPredicted RBP8.1□□□□□ -1.11
ABCA4-207ENST00000536513 F8W8V4 182 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 PRMT5O14744 637 aaPredicted RBP8.1□□□□□ -1.11
ABCA4-207ENST00000536513 NDUFB5O43674 189 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 KAT7O95251 611 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 PGLSO95336 258 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 ZBTB11O95625 1053 aaPredicted RBP8.1□□□□□ -1.11
ABCA4-207ENST00000536513 S1PR4O95977 384 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 BPIP17213 487 aa8.1□□□□□ -1.11
ABCA4-207ENST00000536513 EFNA1P20827 205 aaPredicted RBP8.1□□□□□ -1.11
ABCA4-207ENST00000536513 ACTR3P61158 418 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms