RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 KCTD18Q6PI47 426 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-202ENST00000535689 GLDNQ6ZMI3 551 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-202ENST00000535689 SHFQ7M4L6 423 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 ZNF367Q7RTV3 350 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 PXKQ7Z7A4 578 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 PIP4P1Q86T03 277 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 RPAINQ86UA6 219 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 ADGRF2Q8IZF7 708 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 PARP16Q8N5Y8 322 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 TMEM116Q8NCL8 245 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 MCUQ8NE86 351 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 ENGASEQ8NFI3 743 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 APBB2Q92870 758 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 P2RX5Q93086 422 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 TOP1MTQ969P6 601 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 CDCA3Q99618 268 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-202ENST00000535689 KXD1Q9BQD3 176 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 SLF1Q9BQI6 1058 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 NUF2Q9BZD4 464 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 NDST4Q9H3R1 872 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 PLEKHA4Q9H4M7 779 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 MAGIXQ9H6Y5 334 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 DNAJC18Q9H819 358 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 KIF9Q9HAQ2 790 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 MCM9Q9NXL9 1143 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 OR6C3Q9NZP0 311 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 SELENONQ9NZV5 590 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 PLEKHB1Q9UF11 243 aaPredicted RBP3.31□□□□□ -1.88
SNHG1-202ENST00000535689 VPS28Q9UK41 221 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 RCOR1Q9UKL0 485 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 MTUS1Q9ULD2 1270 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 MYO6Q9UM54 1294 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 FRYLO94915 3013 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 CHD8Q9HCK8 2581 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 FANCMQ8IYD8 2048 aa3.31□□□□□ -1.88
SNHG1-202ENST00000535689 SIPA1L1O43166 1804 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 DCHS1Q96JQ0 3298 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 GRIN2DO15399 1336 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 UMODL1Q5DID0 1318 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 DMXL1Q9Y485 3027 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 A0A0U1RQF3 1178 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 FAM237BA0A1B0GVD1 139 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 FAM90A8PA6NJQ4 464 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 CD8B2A6NJW9 211 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 HSPB2A8KAH6 182 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 PTGES3LE9PB15 166 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 KCNJ13O60928 360 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 TMCC2O75069 709 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 IDH1O75874 414 aaKnown RBP3.3□□□□□ -1.88
SNHG1-202ENST00000535689 RGS11O94810 467 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 CLDN7O95471 211 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 IGKV2-30P06310 120 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 FAM90A13PP0C7W8 464 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 FAM90A24PP0C7X0 464 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 T-ENOLP0DO92 83 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 SHMT1P34896 483 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 FASLGP48023 281 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 DRG2P55039 364 aaKnown RBP3.3□□□□□ -1.88
SNHG1-202ENST00000535689 TMPRSS3P57727 454 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 MRPS34P82930 218 aaKnown RBP3.3□□□□□ -1.88
SNHG1-202ENST00000535689 FOXM1Q08050 763 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 ACSM2AQ08AH3 577 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 TFCP2Q12800 502 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 EPS8Q12929 822 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 KLF9Q13886 244 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-202ENST00000535689 HSPB2Q16082 182 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 MYLK3Q32MK0 819 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 PCGF3Q3KNV8 242 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 ALDH1L2Q3SY69 923 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 ACSM2BQ68CK6 577 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 TYW3Q6IPR3 259 aaKnown RBP3.3□□□□□ -1.88
SNHG1-202ENST00000535689 C8orf82Q6P1X6 216 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-202ENST00000535689 TMEM71Q6P5X7 295 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 C1QL2Q7Z5L3 287 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 TECPR1Q7Z6L1 1165 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 TRIM74Q86UV6 250 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 TRIM73Q86UV7 250 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 MCEMP1Q8IX19 187 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 MYOCDQ8IZQ8 938 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 ZNF444Q8N0Y2 327 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-202ENST00000535689 FBXL14Q8N1E6 418 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 IQCF1Q8N6M8 205 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 MIGA1Q8NAN2 632 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 ZNF548Q8NEK5 533 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-202ENST00000535689 OR6J1Q8NGC5 347 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 PSPC1Q8WXF1 523 aaKnown RBP3.3□□□□□ -1.88
SNHG1-202ENST00000535689 SEPT8Q92599 483 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 SLC41A2Q96JW4 573 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 RPGRIP1Q96KN7 1286 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 CMTM3Q96MX0 182 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 NECTIN4Q96NY8 510 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 NEK1Q96PY6 1258 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 PIP5K1AQ99755 562 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 PCGF1Q9BSM1 259 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 C17orf75Q9HAS0 396 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 BLOC1S4Q9NUP1 217 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 CISD1Q9NZ45 108 aaKnown RBP3.3□□□□□ -1.88
SNHG1-202ENST00000535689 NYAP2Q9P242 653 aa3.3□□□□□ -1.88
SNHG1-202ENST00000535689 INTS6Q9UL03 887 aaKnown RBP3.3□□□□□ -1.88
SNHG1-202ENST00000535689 LSM4Q9Y4Z0 139 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms