RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 PCDHA9Q9Y5H5 950 aa15.69■□□□□ 0.1
MCF2L-232ENST00000535094 LY75O60449 1722 aa15.68■□□□□ 0.1
MCF2L-232ENST00000535094 SMIM35A0A1B0GVV1 85 aa15.68■□□□□ 0.1
MCF2L-232ENST00000535094 FAM234BA2RU67 622 aa15.68■□□□□ 0.1
MCF2L-232ENST00000535094 CXCR6O00574 342 aa15.68■□□□□ 0.1
MCF2L-232ENST00000535094 SH3BP5O60239 455 aa15.68■□□□□ 0.1
MCF2L-232ENST00000535094 RASAL3Q86YV0 1011 aa15.68■□□□□ 0.1
MCF2L-232ENST00000535094 LEMD2Q8NC56 503 aa15.68■□□□□ 0.1
MCF2L-232ENST00000535094 IMP4Q96G21 291 aaKnown RBP15.68■□□□□ 0.1
MCF2L-232ENST00000535094 AARSD1Q9BTE6 412 aaKnown RBP15.68■□□□□ 0.1
MCF2L-232ENST00000535094 UPK3BL1B0FP48 263 aa15.68■□□□□ 0.1
MCF2L-232ENST00000535094 UPK3BL2E5RIL1 263 aa15.68■□□□□ 0.1
MCF2L-232ENST00000535094 SNPHO15079 494 aa15.68■□□□□ 0.1
MCF2L-232ENST00000535094 MSH3P20585 1137 aa15.68■□□□□ 0.1
MCF2L-232ENST00000535094 CASP9P55211 416 aa15.68■□□□□ 0.1
MCF2L-232ENST00000535094 FBXL22Q6P050 247 aa15.68■□□□□ 0.1
MCF2L-232ENST00000535094 ALDH16A1Q8IZ83 802 aa15.68■□□□□ 0.1
MCF2L-232ENST00000535094 KRTCAP2Q8N6L1 136 aa15.68■□□□□ 0.1
MCF2L-232ENST00000535094 OR13F1Q8NGS4 319 aa15.68■□□□□ 0.1
MCF2L-232ENST00000535094 WDR12Q9GZL7 423 aaKnown RBP15.68■□□□□ 0.1
MCF2L-232ENST00000535094 GTF2IRD1Q9UHL9 959 aa15.68■□□□□ 0.1
MCF2L-232ENST00000535094 TPRKBQ9Y3C4 175 aa15.68■□□□□ 0.1
MCF2L-232ENST00000535094 KERAO60938 352 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 PKMP14618 531 aaKnown RBP15.67■□□□□ 0.1
MCF2L-232ENST00000535094 CD52P31358 61 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 MLLT10P55197 1068 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 WDR81Q562E7 1941 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 UBXN11Q5T124 520 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 ZNF621Q6ZSS3 439 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 OR10T2Q8NGX3 314 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 SH3YL1Q96HL8 342 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-232ENST00000535094 NSMCE3Q96MG7 304 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 ZNF347Q96SE7 839 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 UHRF1Q96T88 793 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-232ENST00000535094 RBM4BQ9BQ04 359 aaKnown RBP15.67■□□□□ 0.1
MCF2L-232ENST00000535094 RBM4Q9BWF3 364 aaKnown RBP15.67■□□□□ 0.1
MCF2L-232ENST00000535094 SCUBE2Q9NQ36 999 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 VAPAQ9P0L0 249 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 IL12AP29459 219 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 ADRA1AP35348 466 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 ATP4BP51164 291 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 CRYBB1P53674 252 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-232ENST00000535094 TRAF3Q13114 568 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 RFTN2Q52LD8 501 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-232ENST00000535094 PIK3R6Q5UE93 754 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 ZCCHC8Q6NZY4 707 aaKnown RBP15.67■□□□□ 0.1
MCF2L-232ENST00000535094 KDELC1Q6UW63 502 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 GPR142Q7Z601 462 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 SPRED1Q7Z699 444 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 OR8H2Q8N162 312 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 Q8N9G6 341 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-232ENST00000535094 RSPH1Q8WYR4 309 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 RPL3LQ92901 407 aaKnown RBP15.67■□□□□ 0.1
MCF2L-232ENST00000535094 L3HYPDHQ96EM0 354 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 NEURL2Q9BR09 285 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 SARDHQ9UL12 918 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 CPQQ9Y646 472 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 FAM155AB1AL88 458 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-232ENST00000535094 OXSR1O95747 527 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-232ENST00000535094 ABCB1P08183 1280 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-232ENST00000535094 CRHBPP24387 322 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 HRH2P25021 359 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 LIX1Q8N485 282 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 NKAPQ8N5F7 415 aaKnown RBP15.67■□□□□ 0.1
MCF2L-232ENST00000535094 OR2T11Q8NH01 316 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 SLC13A3Q8WWT9 602 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 TFB2MQ9H5Q4 396 aaKnown RBP15.67■□□□□ 0.1
MCF2L-232ENST00000535094 DNAJB9Q9UBS3 223 aa15.67■□□□□ 0.1
MCF2L-232ENST00000535094 SAMHD1Q9Y3Z3 626 aaKnown RBP15.67■□□□□ 0.1
MCF2L-232ENST00000535094 A0A0D9SEW6 157 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 EVPLLA8MZ36 301 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 FZD9O00144 591 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 ASNA1O43681 348 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 ULK1O75385 1050 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 POU1F1P28069 291 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 TGFBR1P36897 503 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 SMN1Q16637 294 aaKnown RBP15.66■□□□□ 0.1
MCF2L-232ENST00000535094 TRIM60Q495X7 471 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 KANK2Q63ZY3 851 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 ALKAL1Q6UXT8 129 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 CLDN19Q8N6F1 224 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 NLGN2Q8NFZ4 835 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 IGSF8Q969P0 613 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 KIAA1191Q96A73 305 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 PPP2R3BQ9Y5P8 575 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 RAD51BO15315 384 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 FGF1P05230 155 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 ITGB1P05556 798 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 UGT2B4P06133 528 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 ENO2P09104 434 aaPredicted RBP15.66■□□□□ 0.1
MCF2L-232ENST00000535094 MTHFD2P13995 350 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 DGKEP52429 567 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 STC1P52823 247 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 RCAN2Q14206 197 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 OR4F6Q8NGB9 312 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 SLC22A17Q8WUG5 538 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 TM6SF2Q9BZW4 377 aa15.66■□□□□ 0.1
MCF2L-232ENST00000535094 NSUN3Q9H649 340 aaKnown RBP15.66■□□□□ 0.1
MCF2L-232ENST00000535094 ADARB2Q9NS39 739 aaKnown RBP15.66■□□□□ 0.1
MCF2L-232ENST00000535094 USE1Q9NZ43 259 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms